CF831968

Overview
NameCF831968
Unique NameCF831968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF831968 vs. ExPASy Swiss-Prot
Match: NAT12_ARATH (Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 2.502e-54
Identity = 101/134 (75.37%), Postives = 113/134 (84.33%), Query Frame = -3 
Query:  368 YSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTXXXXXXXXXXXXXXXLDNTVPGSRQERGVYEWSETEAARREPAIAKDYELPFRVGRVFRWVKWVGL 769
            YSEAGSSRNIIIVGLSLFFSLS+PAYFQQYGISPN+NLSVPSY+QPY V+SHGPF+S+Y G+NYVMNT               LDNTVPGS+QERGVY WS++E A REPA+AKDYELPFRVGR FRWVKWVG+
Sbjct:  576 YSEAGSSRNIIIVGLSLFFSLSVPAYFQQYGISPNSNLSVPSYYQPYIVSSHGPFKSQYKGMNYVMNTLLSMSMVIAFIMAVILDNTVPGSKQERGVYVWSDSETATREPALAKDYELPFRVGRFFRWVKWVGI 709
[Close]
BLAST of CF831968 vs. ExPASy Swiss-Prot
Match: NAT11_ARATH (Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.749e-23
Identity = 55/126 (43.65%), Postives = 77/126 (61.11%), Query Frame = -3 
Query:  392 YSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTXXXXXXXXXXXXXXXLDNTVPGSRQERGVYEWSETEAARREPAIAKDYELPFRVGRVF 769
            Y++  S RNI IVG+SLF  LSIPAYFQQY   P ++L +PSY+ P+  AS GPF++    +++ MN                LDNTVPGS++ERGVY W+  E  + +P +  DY LP +  ++F
Sbjct:  581 YTQTASFRNITIVGVSLFLGLSIPAYFQQY--QPLSSLILPSYYIPFGAASSGPFQTGIEQLDFAMNAVLSLNMVVTFLLAFILDNTVPGSKEERGVYVWTRAEDMQMDPEMRADYSLPRKFAQIF 704
The following BLAST results are available for this feature:
BLAST of CF831968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NAT12_ARATH2.502e-5475.37Nucleobase-ascorbate transporter 12 OS=Arabidopsis... [more]
NAT11_ARATH1.749e-2343.65Nucleobase-ascorbate transporter 11 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_01B16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01B16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831968 ID=CF831968; Name=CF831968; organism=Citrus sinensis; type=EST; length=771bp
TTTTTTTTTTTTTTTTTACATGGCAAAGACCGTTTCTCAATGTTTCCTTG
AAAAGTAAAATGCCACCCTGGGCAATTACATACACGTTTAGAATTTAAGA
TTACGACAATAAGAGATCCCTATGGATCCTCAATATACAAAAATAACTCA
ACTCTATAAGACCTATATAGTCCAAGAAGTCCATCGTGTGAAGAGGGGGA
AGGGGGGAAAAAAGGTTCGAAGAAAAATATTTACCGTGCGAGCCTAAGGG
ACTTAAGTGTAGGATTAGAGTGCGGCAAGCGGCACAATAATCCCCCAGGA
ATGGCTATTGATGTGCTTGACAACGTGAAGATGGTCGAAGCACCAACAAA
AAGCACATTTTCTCTCAAAGCCCAACCCATTTTACCCATCTGAAAACCCT
ACCAACTCTGAACGGCAATTCATAATCTTTGGCAATAGCTGGCTCCCTCC
TTGCAGCCTCAGTTTCCGACCACTCATACACCCCACGTTCTTGCCGACTG
CCAGGCACTGTATTATCTAAGACAACAGCAAAGAGGAATGCAACAACCAC
ATGCAGTGATAGTAAAGTGTTCATAACATAGTTCACCCCTCCATATTTGC
TGCGGAAAGGTCCATGAGAAGCCACACTATATGGCTGAAAGTAACTTGGG
ACAGACAGGTTGGTATTTGGAGAGATGCCATATTGCTGGAAGTAGGCGGG
TATGGACAGAGAAAAGAATAAAGATAGCCCAACTATGATAATATTGCGAG
AACTTCCAGCTTCACTATACC
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