CF832200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832200 vs. ExPASy Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.821e-26 Identity = 65/136 (47.79%), Postives = 77/136 (56.62%), Query Frame = -3 Query: 258 MGSKTSASLALFLAVNILFFALVTACGXXXXXXXXXXXXXXXXXS-----GASCPRDALKLGVCANVLNGLLNVTIGTPPVQPCCTFIQGLADLEAAVCLCTAIKAXXXXXXXXXXXXXXXXXNVCSKSVPRGFQC 650 MGSK SAS+ALF +NILFFALV++ CPRDALKLGVCA+VLN + NV IG+PP PCC+ ++GL +LEAAVCLCTAIKA N C K VP GF+C Sbjct: 1 MGSKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALSLVLNNCGKQVPNGFEC 136
BLAST of CF832200 vs. ExPASy Swiss-Prot
Match: PRF1_SOLLC (36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12 Identity = 34/84 (40.48%), Postives = 46/84 (54.76%), Query Frame = -3 Query: 258 SCPRDALKLGVCANVLNGLLNVTIGTPPVQPCCTFIQGLADLEAAVCLCTAIKAXXXXXXXXXXXXXXXXXNVCSKSVPRGFQC 509 +CP DALKLG C +VL GL+++ IG Q CC + GL DL+AA+CLCT I+ + C K P+ F+C Sbjct: 260 TCPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLNINIILPIALQVLIDDCGKYPPKDFKC 343
BLAST of CF832200 vs. ExPASy Swiss-Prot
Match: CCDP_MAIZE (Cortical cell-delineating protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12 Identity = 49/126 (38.89%), Postives = 60/126 (47.62%), Query Frame = -3 Query: 258 LALFLAVNILFFALVTACGXXXXXXXXXXXXXXXXXSGAS---CPRDALKLGVCANVLNGLLNVTIGTPPVQPCCTFIQGLADLEAAVCLCTAIKAXXXXXXXXXXXXXXXXXNVCSKSVPRGFQC 626 +ALFLA+++LF A C S S CP DALKL VCA VL GL V +G P + CC ++GL DL+AA+CLCTAIKA N C + P F C Sbjct: 5 VALFLALSLLFAATAHGCEPNCSGPVVPTPPVVPTPSSHSHGRCPIDALKLKVCAKVL-GL--VKVGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVLGIHLNVPLSLNFILNNCGRICPEDFTC 127 The following BLAST results are available for this feature:
BLAST of CF832200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832200 ID=CF832200; Name=CF832200; organism=Citrus sinensis; type=EST; length=688bpback to top |