CF832216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832216 vs. ExPASy Swiss-Prot
Match: GAT16_ARATH (GATA transcription factor 16 OS=Arabidopsis thaliana GN=At3g06740 PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.995e-30 Identity = 83/160 (51.88%), Postives = 98/160 (61.25%), Query Frame = -2 Query: 136 MMDPSVKGLESAEVNS-----------SGSKRLDGVSSDENSIKKPCADCGPTKTPLWRGGPAGPKSLCNASGIRSRKKRRAILGILKEAXXXXXXXXXXXXXXXXXKLGDSLKQRLYALGREVLMQRSIVVKQRK-KLGEEEQAAVLLMALSY-GSVYA 576 M+DP+ K ++S + S S S + +S++ KK CA CG +KTPLWRGGPAGPKSLCNA GIR+RKKRR ++ E K GDSLKQRL LGREV+MQRS QR+ KLGEEEQAAVLLMALSY SVYA Sbjct: 1 MLDPTEKVIDSESMESKLTSVDAIEEHSSSSSNEAISNE----KKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTLISNRSE-------DKKKKSHNRNPKFGDSLKQRLMELGREVMMQRSTAENQRRNKLGEEEQAAVLLMALSYASSVYA 149
BLAST of CF832216 vs. ExPASy Swiss-Prot
Match: GAT23_ARATH (GATA transcription factor 23 OS=Arabidopsis thaliana GN=At5g49300 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.739e-28 Identity = 76/149 (51.01%), Postives = 90/149 (60.40%), Query Frame = -2 Query: 136 MMDPSVKGL--ESAEVNSSGSKRLDGVSSDENSIKKPCADCGPTKTPLWRGGPAGPKSLCNASGIRSRKKRRAILGILKEAXXXXXXXXXXXXXXXXXKLGDSLKQRLYALGREVLMQRSIVVKQRKKLGEEEQAAVLLMALSYGSVYA 576 M+D S K L +S + + ++ ++ N KK CADCG +KTPLWRGGP GPKSLCNA GIR+RKKRR K G+SLKQ L LG + +RS V KQR+KLGEEEQAAVLLMALSYGSVYA Sbjct: 1 MLDHSEKVLLVDSETMKTRAEDMIEQNNTSVNDKKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRRG-------GTEDNKKLKKSSSGGGNRKFGESLKQSLMDLG---IRKRSTVEKQRQKLGEEEQAAVLLMALSYGSVYA 139
BLAST of CF832216 vs. ExPASy Swiss-Prot
Match: GAT17_ARATH (GATA transcription factor 17 OS=Arabidopsis thaliana GN=At3g16870 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.090e-19 Identity = 68/174 (39.08%), Postives = 85/174 (48.85%), Query Frame = -2 Query: 136 LESAEVNSSGSKRLDGVSSDENSIKKPCADCGPTKTPLWRGGPAGPKSLCNASGIRSRKKRRAILGILKEAXXXXXXXXXXXXXXXXXKLGDSLK--------------------------------QRLYALGREV-LMQRSIVVKQR--KKLGEEEQAAVLLMALSYGSVYA 552 +++ +SSGS G S K+ C DCG +TPLWRGGPAGPKSLCNA GI+SRKKR+A LG+ E + K + LG +V +M+RS V K+R +KLGEEE+AAVLLMALS SVYA Sbjct: 21 VDNENCSSSGS----GGGSSSGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGMRSEEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKRSSSSSSNKGVSKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA 190
BLAST of CF832216 vs. ExPASy Swiss-Prot
Match: GAT22_ARATH (GATA transcription factor 22 OS=Arabidopsis thaliana GN=At5g26930 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.992e-13 Identity = 47/125 (37.60%), Postives = 66/125 (52.80%), Query Frame = -2 Query: 136 DENSIKKPCADCGPTKTPLWRGGPAGPKSLCNASGIRSRKKRRA-ILGILKEAXXXXXXXXXXXXXXXXXKLGDSLKQRLYALGREVLMQRS----IVVKQRKKLGEEEQAAVLLMALSYGSVYA 495 +E + C++C TKTP+WRGGP GPKSLCNA GIR RK+RR+ +LGI ++ +++ + S + VK+R+ L EEEQAA+ L+ LS SV A Sbjct: 20 EEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSELLGI------------------------HIIRSHKSLASKKINLLSSSHGGVAVKKRRSLKEEEQAALCLLLLSCSSVLA 120
BLAST of CF832216 vs. ExPASy Swiss-Prot
Match: GAT20_ARATH (Putative GATA transcription factor 20 OS=Arabidopsis thaliana GN=At4g26150 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12 Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = -2 Query: 358 NSSGSKRLDGVSSDENSIKKPCADCGPTKTPLWRGGPAGPKSLCNASGIRSRKKRRAIL 534 N S S+R +G ++D + + C+DC TKTPLWR GP GPKSLCNA GIR RK RRA + Sbjct: 182 NLSNSERQNGYNND--CVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAM 238
BLAST of CF832216 vs. ExPASy Swiss-Prot
Match: GAT24_ARATH (GATA transcription factor 24 OS=Arabidopsis thaliana GN=At5g56860 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = -2 Query: 358 SDENSIKKPCADCGPTKTPLWRGGPAGPKSLCNASGIRSRKKRRAIL 498 S+ N + + C+DC TKTPLWR GP GPKSLCNA GIR RK RRA + Sbjct: 223 SNNNGVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAM 269 The following BLAST results are available for this feature:
BLAST of CF832216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832216 ID=CF832216; Name=CF832216; organism=Citrus sinensis; type=EST; length=739bpback to top |