CF832371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCB_ORYSJ (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0621700 PE=1 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.298e-69 Identity = 135/141 (95.74%), Postives = 138/141 (97.87%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGG+ASEGQVVEAFKILTSD++V AILVNIFGGIMKCDVIASGIVNAAKQV LKVPVVVRLEGTNVDQG RILKESGMTLITAEDLDD Sbjct: 271 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGSASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRILKESGMTLITAEDLDD 411
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCB_ARATH (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Arabidopsis thaliana GN=At2g20420 PE=1 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.489e-68 Identity = 133/142 (93.66%), Postives = 137/142 (96.48%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 PTQEDPREVAAAK DLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASE QVVEAFKILTSD+KV AILVNIFGGIMKCDVIASGIVNAAK+VALKVPVVVRLEGTNV+QG RILKESGM LITA+DLDD Sbjct: 269 PTQEDPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVRLEGTNVEQGKRILKESGMKLITADDLDD 410
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCB2_DICDI (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Dictyostelium discoideum GN=scsB PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.767e-53 Identity = 105/140 (75.00%), Postives = 119/140 (85.00%), Query Frame = -2 Query: 268 QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 687 +EDPREV A K LNYIGLDG IGCMVNGAGLAMATMDIIKL GG PANFLDVGG+ASE V EAFKILT D +V +LVNIFGGIMKCD+IASGIVNA+KQV LK+P+VVRLEGTNV+ G IL++SG+ + +A DLDD Sbjct: 270 EEDPREVEAGKFGLNYIGLDGNIGCMVNGAGLAMATMDIIKLKGGIPANFLDVGGSASEQAVTEAFKILTKDPRVKCLLVNIFGGIMKCDIIASGIVNASKQVGLKIPLVVRLEGTNVNIGKEILEKSGLNITSASDLDD 409
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCB1_BOVIN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Bos taurus GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 9.698e-52 Identity = 97/141 (68.79%), Postives = 119/141 (84.40%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED R+ AAKADLNYIGLDG IGC+VNGAGLAMATMDIIKLHGGTPANFLDVGG A+ QV EAFK++TSD+KV++ILVNIFGGIM+CDVIA GIV A K + +K+P+VVRL+GT VD ++ +SG+ ++ +DLD+ Sbjct: 295 TQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALIADSGLKILACDDLDE 435
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_AKKM8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=sucC PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.267e-51 Identity = 100/141 (70.92%), Postives = 120/141 (85.11%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+EDPREV A K DLNYIGLDG IGCMVNGAGLAMATMDIIK +GG PANFLDVGG+A+E V AF+ILTSD+ V A+LVNIFGGIM+CDVIA GIV AAK + +K+P+VVRLEGTNV+ G +IL +SG+ +I A++LD+ Sbjct: 243 TEEDPREVEAGKYDLNYIGLDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVGGSATEEMVTNAFRILTSDKNVKALLVNIFGGIMRCDVIAQGIVAAAKNIDMKIPLVVRLEGTNVEIGKKILADSGIAIIPADNLDE 383
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCB1_HUMAN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Homo sapiens GN=SUCLA2 PE=1 SV=3) HSP 1 Score: 202.986 bits (515), Expect = 1.267e-51 Identity = 98/141 (69.50%), Postives = 119/141 (84.40%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED R+ AAKA+LNYIGLDG IGC+VNGAGLAMATMDIIKLHGGTPANFLDVGG A+ QV EAFK++TSD+KV+AILVNIFGGIM+CDVIA GIV A K + +K+PVVVRL+GT VD ++ +SG+ ++ +DLD+ Sbjct: 295 TQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDE 435
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCB1_PIG (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (Fragment) OS=Sus scrofa GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.822e-51 Identity = 97/141 (68.79%), Postives = 119/141 (84.40%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED R+ AAKA+LNYIGLDG IGC+VNGAGLAMATMDIIKLHGGTPANFLDVGG A+ QV EAFK++TSD+KV++ILVNIFGGIM+CDVIA GIV A K + +K+PVVVRL+GT VD ++ +SG+ ++ +DLD+ Sbjct: 257 TQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDE 397
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PARDP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Paracoccus denitrificans (strain Pd 1222) GN=sucC PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.813e-51 Identity = 99/141 (70.21%), Postives = 119/141 (84.40%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+EDP+E+AA+K DLNYI LDGEIGCMVNGAGLAMATMDIIKL G PANFLDVGG A++ +V EAFKI+TSD V ILVNIFGGIM+CD+IA GI+ A K+V L+VP+VVRLEGTNV+ G +I+ ESG+ +I A+DL D Sbjct: 246 TEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLFGAEPANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDIIAEGIIAAVKEVGLQVPLVVRLEGTNVELGKQIIGESGLNVIAADDLSD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_BRUSU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella suis GN=sucC PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.400e-50 Identity = 97/141 (68.79%), Postives = 118/141 (83.69%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+EDP+E+ A+K DL Y+ LDG IGCMVNGAGLAMATMDIIKL+G PANFLDVGG AS+ +V AFKI+T+D V ILVNIFGGIMKCDVIA G++ A K+V LKVP+VVRLEGTNV+ G +I+ ESG+ +I+A+DLDD Sbjct: 246 TEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_BRUSI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=sucC PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.400e-50 Identity = 97/141 (68.79%), Postives = 118/141 (83.69%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+EDP+E+ A+K DL Y+ LDG IGCMVNGAGLAMATMDIIKL+G PANFLDVGG AS+ +V AFKI+T+D V ILVNIFGGIMKCDVIA G++ A K+V LKVP+VVRLEGTNV+ G +I+ ESG+ +I+A+DLDD Sbjct: 246 TEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDD 386 The following BLAST results are available for this feature:
BLAST of CF832371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832371 ID=CF832371; Name=CF832371; organism=Citrus sinensis; type=EST; length=694bpback to top |