CF832379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832379 vs. ExPASy Swiss-Prot
Match: U727_ORYSJ (UPF0727 protein OS=Oryza sativa subsp. japonica GN=Os03g0690000 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.968e-26 Identity = 57/65 (87.69%), Postives = 61/65 (93.85%), Query Frame = 3 Query: 108 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 302 IQRLG+ QPDGSYKVTFGV+F+DDRCANIFEALVGTLRAAKKRK + YDGELLLQG HDNVEITL Sbjct: 14 IQRLGQKQPDGSYKVTFGVIFNDDRCANIFEALVGTLRAAKKRKIVKYDGELLLQGAHDNVEITL 78
BLAST of CF832379 vs. ExPASy Swiss-Prot
Match: U727_ORYSI (UPF0727 protein OS=Oryza sativa subsp. indica GN=OsI_012692 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.968e-26 Identity = 57/65 (87.69%), Postives = 61/65 (93.85%), Query Frame = 3 Query: 108 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 302 IQRLG+ QPDGSYKVTFGV+F+DDRCANIFEALVGTLRAAKKRK + YDGELLLQG HDNVEITL Sbjct: 14 IQRLGQKQPDGSYKVTFGVIFNDDRCANIFEALVGTLRAAKKRKIVKYDGELLLQGAHDNVEITL 78
BLAST of CF832379 vs. ExPASy Swiss-Prot
Match: U727_THEHA (UPF0727 protein ST45-2 OS=Thellungiella halophila PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.842e-24 Identity = 54/66 (81.82%), Postives = 59/66 (89.39%), Query Frame = 3 Query: 108 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLK 305 I RLG +Q DGSYKVTFGVLF+DDRCANIFEALVGTLRAAKKRK + + GELLLQGVHD VEITL+ Sbjct: 14 IHRLGSLQSDGSYKVTFGVLFNDDRCANIFEALVGTLRAAKKRKIVAFPGELLLQGVHDKVEITLR 79
BLAST of CF832379 vs. ExPASy Swiss-Prot
Match: U727_ARATH (UPF0727 protein At4g33640 OS=Arabidopsis thaliana GN=At4g33640 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.142e-24 Identity = 54/66 (81.82%), Postives = 59/66 (89.39%), Query Frame = 3 Query: 108 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLK 305 I RLG Q DGSYKVTFGVLF+DDRCANIFEALVGTLRAAKKRK + ++GELLLQGVHD VEITL+ Sbjct: 14 IHRLGSRQTDGSYKVTFGVLFNDDRCANIFEALVGTLRAAKKRKIVAFEGELLLQGVHDKVEITLR 79
BLAST of CF832379 vs. ExPASy Swiss-Prot
Match: U727_PICSI (UPF0727 protein WS02710_H03 OS=Picea sitchensis PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 9.141e-24 Identity = 54/65 (83.08%), Postives = 58/65 (89.23%), Query Frame = 3 Query: 108 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 302 I+RL + +PDGSY V FGVLF DDRCANIFEALVGTLRAAKKRK +TYDGELLLQGVHDNVEI L Sbjct: 16 IKRLAQPRPDGSYVVKFGVLFSDDRCANIFEALVGTLRAAKKRKVVTYDGELLLQGVHDNVEIVL 80
BLAST of CF832379 vs. ExPASy Swiss-Prot
Match: CF115_SALSA (UPF0727 protein C6orf115 homolog OS=Salmo salar PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.235e-20 Identity = 48/65 (73.85%), Postives = 55/65 (84.62%), Query Frame = 3 Query: 108 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 302 IQRLG DG V FGVLF+DDRCANIFEALVGTLRAAK++K + ++GELLLQGVHDNV+ITL Sbjct: 14 IQRLGSKNADGQTCVKFGVLFNDDRCANIFEALVGTLRAAKRKKIIAFEGELLLQGVHDNVDITL 78
BLAST of CF832379 vs. ExPASy Swiss-Prot
Match: CF115_XENLA (UPF0727 protein C6orf115 homolog OS=Xenopus laevis PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.614e-20 Identity = 47/65 (72.31%), Postives = 54/65 (83.08%), Query Frame = 3 Query: 108 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 302 I+RLG DG + V FGVLF DD+CAN+FEALVGTL+AAKKRK +TY GELLLQGVHDNV+I L Sbjct: 14 IRRLGSKGNDGKFSVKFGVLFSDDKCANLFEALVGTLKAAKKRKIITYQGELLLQGVHDNVDIVL 78
BLAST of CF832379 vs. ExPASy Swiss-Prot
Match: CF115_XENTR (UPF0727 protein C6orf115 homolog OS=Xenopus tropicalis PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.132e-20 Identity = 47/65 (72.31%), Postives = 53/65 (81.54%), Query Frame = 3 Query: 108 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 302 I+RLG DG V FGVLF DD+CAN+FEALVGTL+AAKKRK +TY GELLLQGVHDNV+I L Sbjct: 14 IRRLGSKGNDGKLSVKFGVLFSDDKCANLFEALVGTLKAAKKRKIVTYQGELLLQGVHDNVDIVL 78
BLAST of CF832379 vs. ExPASy Swiss-Prot
Match: CF115_DANRE (UPF0727 protein C6orf115 homolog OS=Danio rerio GN=si:dkey-34f16.3 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.046e-19 Identity = 44/65 (67.69%), Postives = 55/65 (84.62%), Query Frame = 3 Query: 108 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 302 I+RLG DG V FGVLF+DD+CAN+FEALVGTL+AAK++K +T+DGELLLQGVHDNV++ L Sbjct: 14 IRRLGSKNADGKTSVKFGVLFNDDQCANLFEALVGTLKAAKRKKVITFDGELLLQGVHDNVDVVL 78
BLAST of CF832379 vs. ExPASy Swiss-Prot
Match: CF115_MOUSE (UPF0727 protein C6orf115 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.784e-19 Identity = 46/65 (70.77%), Postives = 52/65 (80.00%), Query Frame = 3 Query: 108 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 302 I RLG DG V FGVLF DDRCAN+FEALVGTL+AAK+RK +TY GELLLQGVHD+V+I L Sbjct: 14 IHRLGSKNADGKLSVKFGVLFQDDRCANLFEALVGTLKAAKRRKIVTYAGELLLQGVHDDVDIVL 78 The following BLAST results are available for this feature:
BLAST of CF832379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832379 ID=CF832379; Name=CF832379; organism=Citrus sinensis; type=EST; length=553bpback to top |