CF832453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832453 vs. ExPASy Swiss-Prot
Match: CLH1_CITUN (Chlorophyllase-1, chloroplastic OS=Citrus unshiu PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.411e-49 Identity = 92/157 (58.60%), Postives = 112/157 (71.34%), Query Frame = -2 Query: 264 ALVGIDPVAGLASVHSELEPPILSHDSFEFSIPXXXXXXXXXXXTKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKDPSLAPIELDEVEFIPAA 734 A++G+DPVAG + + L+P ILS DSF+FSIP +C+ CAPE NHE+FF RC S AHF A DYGHMDILDDNP K+WA+SK+ C NG + RDPMRRCV+GI AFLK +FDGD EDFR +LKDPS API+LD VE+I A+ Sbjct: 164 AVIGLDPVAGTSKT-TGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFDGDAEDFRQILKDPSFAPIKLDSVEYIDAS 319
BLAST of CF832453 vs. ExPASy Swiss-Prot
Match: CLH1_CITSI (Chlorophyllase-1, chloroplastic OS=Citrus sinensis GN=CHLASE1 PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.560e-48 Identity = 91/157 (57.96%), Postives = 111/157 (70.70%), Query Frame = -2 Query: 264 ALVGIDPVAGLASVHSELEPPILSHDSFEFSIPXXXXXXXXXXXTKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKDPSLAPIELDEVEFIPAA 734 A++G+DPVAG + + L+P ILS DSF+FSIP +C+ CAPE NHE+FF RC S AHF A DYGHMDILDDNP K+WA+SK+ C NG + RDPMRRCV+GI AFLK +F GD EDFR +LKDPS API+LD VE+I A+ Sbjct: 164 AVIGLDPVAGTSKT-TGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFYGDAEDFRQILKDPSFAPIKLDSVEYIDAS 319
BLAST of CF832453 vs. ExPASy Swiss-Prot
Match: CLH1_ARATH (Chlorophyllase-1 OS=Arabidopsis thaliana GN=CLH1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.499e-24 Identity = 66/157 (42.04%), Postives = 93/157 (59.24%), Query Frame = -2 Query: 288 SIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIPXXXXXXXXXXXTK-CMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKDPSLAPIELD 749 SI SAL+GIDPVAG + + +P IL++ +SFE IP M PCAP + NHE+F+K C + AHF A DYGHMD+LDD+ G + ++ +C NG++ + MR V GI AFLK G+ + R ++KDPS++P +LD Sbjct: 158 SITFSALIGIDPVAG-TNKYIRTDPHILTYKPESFELDIPVAVVGTGLGPKWNNVMPPCAPTDLNHEEFYKECK-ATKAHFVAADYGHMDMLDDDLPGFVGF-MAGCMCKNGQRKKSEMRSFVGGIVVAFLKYSLWGEKAEIRLIVKDPSVSPAKLD 311
BLAST of CF832453 vs. ExPASy Swiss-Prot
Match: CLH2_ARATH (Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.828e-20 Identity = 64/166 (38.55%), Postives = 90/166 (54.22%), Query Frame = -2 Query: 273 SIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFS---IPXXXXXXXXXXXTKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKD--PSLAPIELDEVEFI 749 ++KIS L+GIDPV G + PP+L++ +SF+ I PCAP NH +FF+ C HF AKDYGH+D+LDD+ +G + + S LC NG++ R PMRR V G+ +FLKAY +GD + +KD P+E+ E E I Sbjct: 157 NLKISTLIGIDPVDGTGK-GKQTPPPVLAYLPNSFDLDKTPILVIGSGLGETARNPLFPPCAPPGVNHREFFRECQ-GPAWHFVAKDYGHLDMLDDDTKGIRGKS-SYCLCKNGEE-RRPMRRFVGGLVVSFLKAYLEGDDREL-VKIKDGCHEDVPVEIQEFEVI 317
BLAST of CF832453 vs. ExPASy Swiss-Prot
Match: CLH0_CHEAL (Chlorophyllase type 0 OS=Chenopodium album GN=CACLH PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.574e-16 Identity = 56/160 (35.00%), Postives = 83/160 (51.88%), Query Frame = -2 Query: 291 TNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIPXXXXXXXXXXXTKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKDPSLAPIEL 764 +N + + SAL+G+DPVAG SV P +L++ +SF SIP T CAP + +H+QF+ C + +HF YGHMD+L++ P +S +C +P+ MRR + GI AFL AYF D + ++ + SLAP L Sbjct: 176 SNIKLDVTFSALIGVDPVAG-RSVDDRTLPHVLTYKPNSFNLSIPVTVIGSGLGNHTIS---CAPNHVSHQQFYDECK-ENSSHFVITKYGHMDMLNEFRLSPIAVTMS-LMCAQSFRPKATMRRTLGGIMVAFLNAYFRDDGRQYYAIIANRSLAPTNL 329 The following BLAST results are available for this feature:
BLAST of CF832453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832453 ID=CF832453; Name=CF832453; organism=Citrus sinensis; type=EST; length=768bpback to top |