CF832704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832704 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 9.800e-54 Identity = 102/172 (59.30%), Postives = 133/172 (77.33%), Query Frame = -1 Query: 177 AAGIADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTPLSVSLSRAQSAKSFVTKLRKFRTLKHREYGAIADCLDEMGDTVDRLSKSVQELNPMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKPLEGKVKSSVRAQVVNVAQVTSNALSLINKFAGKH 692 A+ +FI++SC TTYPA+C QSLSAYA +IQ +P++LA T L VSL+R Q A++F+ +L KF+ LK R+Y AI DCL+E+ D++DR+S+S E+ + AKG DF + MSNVETWVSAALTDE TC DGF GK ++GK+K SVRAQVV VA+VTSNAL+L+N FA KH Sbjct: 20 ASAAPANQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAAKH 191
BLAST of CF832704 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.111e-16 Identity = 49/158 (31.01%), Postives = 88/158 (55.70%), Query Frame = -1 Query: 198 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTPLSVSLSRAQSAKSF--VTKLRKFRTLKHREYGAIADCLDEMGDTVDRLSKSVQELNPMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKPLEGKVKSSVRAQVVNVAQVTSNALSLI 665 ++SSC ST YP LC +++A + ++ Q V +S++++ ++ + KL K L RE A+ DCL+ + +T+D L K+V++L K H +++T +SAA+T++ TC DGF V+ ++ V+V ++ SNAL++I Sbjct: 69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLS--QHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224
BLAST of CF832704 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.111e-16 Identity = 49/158 (31.01%), Postives = 88/158 (55.70%), Query Frame = -1 Query: 198 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTPLSVSLSRAQSAKSF--VTKLRKFRTLKHREYGAIADCLDEMGDTVDRLSKSVQELNPMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKPLEGKVKSSVRAQVVNVAQVTSNALSLI 665 ++SSC ST YP LC +++A + ++ Q V +S++++ ++ + KL K L RE A+ DCL+ + +T+D L K+V++L K H +++T +SAA+T++ TC DGF V+ ++ V+V ++ SNAL++I Sbjct: 69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLS--QHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224
BLAST of CF832704 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.408e-14 Identity = 48/168 (28.57%), Postives = 88/168 (52.38%), Query Frame = -1 Query: 198 VTAAGIADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTPLSVSLSRAQSAKSFVTKL-RKFRTLKHREYGAIADCLDEMGDTVDRLSKSVQELNPMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKPLEGKVKSSVRAQVVNVAQVTSNALSLI 698 +T ++S C ST YP LC +++A S +++ L+++ + V KL K + L RE A+ DCL+ + +T+D L +V++L+ + K H +++T +S+A+T++ TC DGF + KV+ ++ V+V + SNAL++I Sbjct: 51 ITTLSSTSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKS--LRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMI 216
BLAST of CF832704 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.591e-14 Identity = 45/157 (28.66%), Postives = 88/157 (56.05%), Query Frame = -1 Query: 198 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTPLSVSLSRAQSAKSFVTKL-RKFRTLKHREYGAIADCLDEMGDTVDRLSKSVQELNPMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKPLEGKVKSSVRAQVVNVAQVTSNALSLI 665 +RSSC ST YP LC+ ++ S + + ++++++ + V KL +K + L RE A+ DCL+ + +T+D L ++V++L+ K H +++T +S+A+T++ TC DGF + +V+ ++ ++V + SNAL++I Sbjct: 59 LRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKK--TLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMI 213
BLAST of CF832704 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.768e-13 Identity = 52/164 (31.71%), Postives = 77/164 (46.95%), Query Frame = -1 Query: 183 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTPLSVSLSRAQSAKSFVTKLRKFRTLKHREYGAIADCLDEMGDTVDRLSKSVQELNPM-GRAKGQDFLWHMSNVETWVSAALTDENTCTDGFG--GKPLEGKVKSSVRAQVVNVAQVTSNALSLINKFAG 665 +++ C +T YP+ C S+S+ S P L L V++ S F +KLR R AI C GD +DRL+ S+ L + GR +SNVETW+SAALTD++TC D G + + N + SN+L+++ K G Sbjct: 77 LKAVCDTTRYPSSCFSSISSLPESNTTDPELLFKLSLRVAIDELSS---FPSKLRANAEQDARLQKAIDVCSSVFGDALDRLNDSISALGTVAGRIASSA---SVSNVETWLSAALTDQDTCLDAVGELNSTAARGALQEIETAMRNSTEFASNSLAIVTKILG 234
BLAST of CF832704 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.166e-12 Identity = 49/169 (28.99%), Postives = 80/169 (47.34%), Query Frame = -1 Query: 189 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTPLSVSLSRAQSAKSFVTKLRKFRTLKHREYGAIADCLDEMGDTVDRLSKSVQELNPMGRAKGQDFLWHMSNVETWVSAALTDENTCTDG----------FGGKPLEGKVKSSVRAQVVNVAQVTSNALSLINKF 665 +R+ C T YPA CV S+S S P L L V ++ S KL + T R +++ C D D +D ++ ++ + +G K + ++TW+SAA+TD +TC D + P+ K+KS+ +VN + TSN+L++I KF Sbjct: 271 LRNVCSVTRYPASCVSSISKLPSSNTTDPEALFRLSLQVVINELNSIAGLPKKLAE-ETDDERLKSSLSVCGDVFNDAIDIVNDTISTMEEVGDGKKILKSSTIDEIQTWLSAAVTDHDTCLDALDELSQNKTEYANSPISLKLKSA----MVNSRKFTSNSLAIIAKF 434
BLAST of CF832704 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.440e-12 Identity = 46/159 (28.93%), Postives = 88/159 (55.35%), Query Frame = -1 Query: 198 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTPLSVSLSRAQSAKSF--VTKLRKFRT-LKHREYGAIADCLDEMGDTVDRLSKSVQELNPMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKPLEGKVKSSVRAQVVNVAQVTSNALSLI 665 ++S+C +T +P LC ++ + ++ Q V LS++++ +++ V +L K R L RE A+ DCL+ M +T+D L +V++L K H+ +++T +S+A+T++ TC DGF + KV+ + +V ++ SNAL++I Sbjct: 66 VKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKS--LKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMI 222
BLAST of CF832704 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.440e-12 Identity = 50/158 (31.65%), Postives = 83/158 (52.53%), Query Frame = -1 Query: 195 IRSSCKSTTYPALCVQSLSAYAPSIQ-QSPRQLAVTPLSVSLSRAQSAKSFVTKLRKFRTLKHREYGAIADCLDEMGDTVDRLSKSVQELNPMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKPLEGKVKSSVRAQVVNVAQVTSNALSLIN 665 I +C+ T +P LCV SL + S+ S + L ++++L A L F + R A C++ + D+VD LS+++ + AK QD V TW+SAALT+ +TCT+GF G +G VK + A + N++++ SN L++ + Sbjct: 87 ISKACELTRFPELCVDSLMDFPGSLAASSSKDLIHVTVNMTLHHFSHALYSSASL-SFVDMPPRARSAYDSCVELLDDSVDALSRALSSV-VSSSAKPQD-------VTTWLSAALTNHDTCTEGFDGVD-DGGVKDHMTAALQNLSELVSNCLAIFS 234
BLAST of CF832704 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11 Identity = 45/166 (27.11%), Postives = 85/166 (51.20%), Query Frame = -1 Query: 180 TRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTPLSVSLSRAQSAKSFVTKLRKFRTLKHREYGAIADCLDEMGDTVDRLSKSVQELNPMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGG-KPLEGKVKSSVRAQVVNVAQVTSNALSLINKFAGK 674 T+ I +C + YP LC+ +L + S+ +L + +L + A + + + + R A CL+ + D+VD L++++ + + + S+V TW+S+A+T+ +TCTDGF + G+VK V V +++++ SN L++ FAGK Sbjct: 72 TQAISRTCSKSLYPNLCIDTLLDFPGSLTADENELIHISFNATLQKFSKAL-YTSSTITYTQMPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDESH------SDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAI---FAGK 227 The following BLAST results are available for this feature:
BLAST of CF832704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832704 ID=CF832704; Name=CF832704; organism=Citrus sinensis; type=EST; length=788bpback to top |