CF834518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834518 vs. ExPASy Swiss-Prot
Match: IDI2_CLABR (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia breweri GN=IPI2 PE=3 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 9.652e-32 Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = -3 Query: 305 VTVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 523 V V+PNPDEVAE KYVNREQLKELL+KADAGEEGLKLSPWFRLVVDNFL KWWDH+EKGTL+E +DMK+IHKL Sbjct: 214 VAVHPNPDEVAEIKYVNREQLKELLKKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKSIHKL 286
BLAST of CF834518 vs. ExPASy Swiss-Prot
Match: IDI1_CAMAC (Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata GN=IPI1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.652e-32 Identity = 62/73 (84.93%), Postives = 68/73 (93.15%), Query Frame = -3 Query: 305 VTVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 523 V VNPNPDEVA+ KYV R+QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDH+EKGT++E DMK+IHKL Sbjct: 162 VNVNPNPDEVADIKYVTRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTMHEAADMKSIHKL 234
BLAST of CF834518 vs. ExPASy Swiss-Prot
Match: IDI2_CLAXA (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia xantiana GN=IPI2 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.808e-31 Identity = 62/73 (84.93%), Postives = 68/73 (93.15%), Query Frame = -3 Query: 305 VTVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 523 V ++PNPDEVA+ KYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL KWWDH+EKGTL+E +DMKTIH L Sbjct: 218 VGIHPNPDEVADIKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKTIHNL 290
BLAST of CF834518 vs. ExPASy Swiss-Prot
Match: IDI2_CAMAC (Isopentenyl-diphosphate Delta-isomerase II OS=Camptotheca acuminata GN=IPI2 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.256e-31 Identity = 60/74 (81.08%), Postives = 68/74 (91.89%), Query Frame = -3 Query: 302 VTVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKLT 523 V V+PNPDEVA+ KYVN++QLK+LLRK DAGEEGLKLSPWFRLVV+NFLFKWWDH+EKGTL + DMKTIHKLT Sbjct: 236 VNVHPNPDEVADVKYVNQDQLKDLLRKVDAGEEGLKLSPWFRLVVENFLFKWWDHVEKGTLQDATDMKTIHKLT 309
BLAST of CF834518 vs. ExPASy Swiss-Prot
Match: IDI2_ARATH (Isopentenyl-diphosphate Delta-isomerase II OS=Arabidopsis thaliana GN=IPP2 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.171e-31 Identity = 62/73 (84.93%), Postives = 67/73 (91.78%), Query Frame = -3 Query: 305 VTVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 523 V V PNPDEVAE KYV+RE+LKEL++KADAGEEGLKLSPWFRLVVDNFL KWWDH+EKGTL E IDMKTIHKL Sbjct: 212 VKVQPNPDEVAEIKYVSREELKELVKKADAGEEGLKLSPWFRLVVDNFLMKWWDHVEKGTLVEAIDMKTIHKL 284
BLAST of CF834518 vs. ExPASy Swiss-Prot
Match: IDI1_CLABR (Isopentenyl-diphosphate Delta-isomerase I OS=Clarkia breweri GN=IPI1 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 2.013e-29 Identity = 58/73 (79.45%), Postives = 66/73 (90.41%), Query Frame = -3 Query: 305 VTVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 523 V ++PNPDEVAE KY+NR+ LKELLRKADA EEG+KLSPWFRLVVDNFLFKWWDH+EKG+L + DMKTIHKL Sbjct: 215 VNLDPNPDEVAEVKYMNRDDLKELLRKADAEEEGVKLSPWFRLVVDNFLFKWWDHVEKGSLKDAADMKTIHKL 287
BLAST of CF834518 vs. ExPASy Swiss-Prot
Match: IDI1_ARATH (Isopentenyl-diphosphate Delta-isomerase I OS=Arabidopsis thaliana GN=IPP1 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.305e-28 Identity = 56/73 (76.71%), Postives = 65/73 (89.04%), Query Frame = -3 Query: 305 VTVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 523 V + PNPDEVAE KYV+RE+LKEL++KADAG+E +KLSPWFRLVVDNFL KWWDH+EKGT+ E DMKTIHKL Sbjct: 161 VKLQPNPDEVAEIKYVSREELKELVKKADAGDEAVKLSPWFRLVVDNFLMKWWDHVEKGTITEAADMKTIHKL 233
BLAST of CF834518 vs. ExPASy Swiss-Prot
Match: IDI1_MESAU (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mesocricetus auratus GN=IDI1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.496e-16 Identity = 37/74 (50.00%), Postives = 60/74 (81.08%), Query Frame = -3 Query: 305 HVTVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 526 +VT+NP+P+E+ Y YV++E+LKEL++KA +GE +KL+PWF+++VD FLFKWWD+L L++ +D + IH++ Sbjct: 158 NVTLNPDPNEIKSYCYVSKEELKELVKKAASGE--VKLTPWFKIIVDTFLFKWWDNLNH--LSQFVDHEKIHRM 227
BLAST of CF834518 vs. ExPASy Swiss-Prot
Match: IDI1_PONAB (Isopentenyl-diphosphate Delta-isomerase 1 OS=Pongo abelii GN=IDI1 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 9.697e-16 Identity = 35/74 (47.30%), Postives = 59/74 (79.73%), Query Frame = -3 Query: 305 HVTVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 526 +VT+NP+P+E+ Y YV++E+LKELL+KA +GE +K++PWF+++ + FLFKWWD+L LN+ +D + I+++ Sbjct: 158 NVTLNPDPNEIKSYCYVSKEELKELLKKAASGE--IKITPWFKIIAETFLFKWWDNLNH--LNQFVDHEKIYRI 227
BLAST of CF834518 vs. ExPASy Swiss-Prot
Match: IDI1_MOUSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus GN=Idi1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.654e-15 Identity = 35/74 (47.30%), Postives = 58/74 (78.38%), Query Frame = -3 Query: 305 HVTVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 526 +VT+NP+P+E+ Y YV++E+++E+L+KA +GE +KL+PWF+++ D FLFKWWD+L L+ +D + IH+L Sbjct: 158 NVTLNPDPNEIKSYCYVSKEEVREILKKAASGE--IKLTPWFKIIADTFLFKWWDNLNH--LSPFVDHEKIHRL 227 The following BLAST results are available for this feature:
BLAST of CF834518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834518 ID=CF834518; Name=CF834518; organism=Citrus sinensis; type=EST; length=747bpback to top |