CF834747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 8.039e-87 Identity = 157/187 (83.96%), Postives = 172/187 (91.98%), Query Frame = -2 Query: 185 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQPAAETS 745 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYT++YQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWK QS+LKQDYKDD++RE+AV+LALK LSKTMDSTSLTS+KLELAEV+L+PSGKVKYQV SPE+L++LL + G+TQPAAETS Sbjct: 64 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKDDVTREDAVKLALKALSKTMDSTSLTSEKLELAEVYLLPSGKVKYQVHSPESLNRLLTESGLTQPAAETS 250
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 5.211e-86 Identity = 159/187 (85.03%), Postives = 169/187 (90.37%), Query Frame = -2 Query: 185 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQPAAETS 745 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYT+ YQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNYGGWK QSILKQDYKDD +REEAV+LALKVL+KTMDSTSLTS+KLELAEV+L PS VKY V SPE+L+KLLVKHGVTQPAAETS Sbjct: 64 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKVLTKTMDSTSLTSEKLELAEVYLTPSKTVKYHVHSPESLTKLLVKHGVTQPAAETS 250
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 5.393e-83 Identity = 154/187 (82.35%), Postives = 167/187 (89.30%), Query Frame = -2 Query: 185 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQPAAETS 745 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYT++YQEPMPVEQLVQSLCDTKQGYTQ+GGL PFGVSFLFAGWDKN+GFQL+MSDPSGNY GWK QS+LKQDYKDDI+REEAVQLALKVLSKTMDSTSLTS+KLELAEVFL +GKVKYQ CSPE L+ +LVK G+TQP+AE S Sbjct: 64 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFL-SNGKVKYQACSPEKLNSMLVKSGLTQPSAEES 249
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSJ (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica GN=Os06g0167600 PE=2 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.164e-77 Identity = 143/186 (76.88%), Postives = 162/186 (87.10%), Query Frame = -2 Query: 191 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMP-SGKVKYQVCSPEALSKLLVKHGVTQPAAE 745 KMYKID H+ACAVAGIMSDANIL+NTAR+ AQRY +YQEP+PVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNY GWK QS+LKQDY+D ++REEAV LALKVLSKTMDSTSLT++KLELAEVFL P +G+V+YQVCSPEA+ KLL K G++QPA E Sbjct: 64 KMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLLAKAGLSQPAPE 249
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSI (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. indica GN=OsI_021067 PE=1 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.164e-77 Identity = 143/186 (76.88%), Postives = 162/186 (87.10%), Query Frame = -2 Query: 191 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMP-SGKVKYQVCSPEALSKLLVKHGVTQPAAE 745 KMYKID H+ACAVAGIMSDANIL+NTAR+ AQRY +YQEP+PVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNY GWK QS+LKQDY+D ++REEAV LALKVLSKTMDSTSLT++KLELAEVFL P +G+V+YQVCSPEA+ KLL K G++QPA E Sbjct: 64 KMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLLAKAGLSQPAPE 249
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSJ (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica GN=PAC1 PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.520e-77 Identity = 143/186 (76.88%), Postives = 162/186 (87.10%), Query Frame = -2 Query: 191 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMP-SGKVKYQVCSPEALSKLLVKHGVTQPAAE 745 KMYKID H+ACAVAGIMSDANIL+NTAR+ AQRY +YQEP+PVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNY GWK QS+LKQDY+D ++REEAV LALKVLSKTMDSTSLT++KLELAEVFL P +G+V+YQVCSPEA+ KLL K G++QPA E Sbjct: 64 KMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLLAKAGLSQPAPE 249
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSI (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. indica GN=OsI_021120 PE=1 SV=2) HSP 1 Score: 289.271 bits (739), Expect = 1.520e-77 Identity = 143/186 (76.88%), Postives = 162/186 (87.10%), Query Frame = -2 Query: 191 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMP-SGKVKYQVCSPEALSKLLVKHGVTQPAAE 745 KMYKID H+ACAVAGIMSDANIL+NTAR+ AQRY +YQEP+PVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNY GWK QS+LKQDY+D ++REEAV LALKVLSKTMDSTSLT++KLELAEVFL P +G+V+YQVCSPEA+ KLL K G++QPA E Sbjct: 64 KMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLLAKAGLSQPAPE 249
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.361e-54 Identity = 106/182 (58.24%), Postives = 133/182 (73.08%), Query Frame = -2 Query: 203 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWK-XXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQ 745 KM+KID+HV CAVAGI SDANILIN AR+ +QR+ Y YQEPMPVEQLV +CDTKQGYTQ+GGLRPFGVSFL+AGWD++YGFQLY SDPSGN+ GWK QS+L+ +YK DIS +EA+QLALKVL+KTMD +++ S+KLE + F V Y + + L + + + Q Sbjct: 65 KMFKIDEHVVCAVAGITSDANILINYARLSSQRFFYQYQEPMPVEQLVSQICDTKQGYTQYGGLRPFGVSFLYAGWDRHYGFQLYQSDPSGNFAGWKATSIGGENSQVAQSVLRSNYKPDISLKEALQLALKVLTKTMDRSNINSEKLEFS-YFTKQGDNVVYHIFTAAELDAFIKETDLEQ 245
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA4_MOUSE (Proteasome subunit alpha type-4 OS=Mus musculus GN=Psma4 PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.341e-49 Identity = 98/186 (52.69%), Postives = 131/186 (70.43%), Query Frame = -2 Query: 191 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKD-DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQPAAE 745 K+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ YTQFGG RPFGVS L+ GWDK+YGFQLY SDPSGNYGGWK S+LKQDYK+ +++ + A+ LA+KVL+KTMD + L+++K+E+A SGK +V + + +L+ KH + AE Sbjct: 64 KIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIA-TLTRESGKTVIRVLKQKEVEQLIKKHEEEEAKAE 248
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA4_HUMAN (Proteasome subunit alpha type-4 OS=Homo sapiens GN=PSMA4 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.287e-49 Identity = 97/186 (52.15%), Postives = 131/186 (70.43%), Query Frame = -2 Query: 191 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKD-DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQPAAE 745 K+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ YTQFGG RPFGVS L+ GWDK+YGFQLY SDPSGNYGGWK S+LKQDYK+ +++ + A+ LA+KVL+KTMD + L+++K+E+A +GK +V + + +L+ KH + AE Sbjct: 64 KIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQLIKKHEEEEAKAE 248 The following BLAST results are available for this feature:
BLAST of CF834747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834747 ID=CF834747; Name=CF834747; organism=Citrus sinensis; type=EST; length=746bpback to top |