CF834784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: SOT1_SPIOL (2-oxoglutarate/malate translocator, chloroplastic OS=Spinacia oleracea GN=SODIT1 PE=1 SV=1) HSP 1 Score: 358.221 bits (918), Expect = 1.671e-98 Identity = 165/193 (85.49%), Postives = 181/193 (93.78%), Query Frame = 2 Query: 2 LLLPLRLWVFGGRLNVDPVTAAILGLSILLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWK 580 LLL + LWVFGG+L VD VTAAILGLS+LL+TGVVTWKECL ESVAWDTLTWFAALIAMAGYLNKYGLITWFS+ VVK VGGLGLSWQ+SFG+L+LLYFYSHYFFASGAAHIGAMFTAFLSVASALG PP+ A+VL+F SNLMGGLTHYGIGSAPVFYGANYVPL +WWGYGF++SIVN+IIWLGVGG+WWK Sbjct: 372 LLLTVGLWVFGGKLGVDAVTAAILGLSVLLITGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSENVVKVVGGLGLSWQMSFGVLVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPFLAAIVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLPQWWGYGFLISIVNLIIWLGVGGLWWK 564
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: YFLS_BACSU (Putative malate transporter yflS OS=Bacillus subtilis GN=yflS PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 1.745e-63 Identity = 107/192 (55.73%), Postives = 142/192 (73.96%), Query Frame = 2 Query: 5 LLPLRLWVFGGRLNVDPVTAAILGLSILLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWK 580 LL L LW+FGG N+D T A++GL++LL++ V+TW + E AWDTLTWFAAL+ +A +LN+ G+++WFS + V G SW ++F ILI++Y+YSHYFFAS AHI AM++AFL+V A G PP A+ LAF SNL G THYG G+APVF+GA Y+P KWW GFI+SIV+II+WL +GG+WWK Sbjct: 284 LLVLVLWIFGGSFNIDATTTALIGLAVLLLSQVLTWDDIKKEQGAWDTLTWFAALVMLANFLNELGMVSWFSNAMKSSVSGF--SWIVAFIILIVVYYYSHYFFASATAHISAMYSAFLAVVVAAGAPPLLAALSLAFISNLFGSTTHYGSGAAPVFFGAGYIPQGKWWSIGFILSIVHIIVWLVIGGLWWK 473
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: Y020_HAEIN (Uncharacterized transporter HI0020 OS=Haemophilus influenzae GN=HI0020 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.947e-30 Identity = 62/189 (32.80%), Postives = 101/189 (53.44%), Query Frame = 2 Query: 23 WVFGGRLNVDPVTAAILGLSILLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQT---VVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWWK 580 W+F L+++ AI+ + + +V +VTW + L AW+TL W+ +I M+G L K G W + T +++F G ++ +++ L Y FASG A++ AM F +V G P +A+ L F ++ G +THYG G P+ +GA Y + WW G I++ ++II L +G WWK Sbjct: 287 WIFSNSLHINATIVAIIVMVLCIVLSIVTWDDILKSKGAWNTLVWYGGIIGMSGLLEKSGFFKWLANTLSTILQFEG----HGMMALIVILTLSVSVRYLFASGGAYVAAMVPVFATVGHVTGAPTELLALGLVFANSYGGSVTHYGGGPGPIAFGAGYNDIKSWWITGAIIAFGSLIIHLTIGMAWWK 471
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: YBHI_ECOLI (Inner membrane protein ybhI OS=Escherichia coli (strain K12) GN=ybhI PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28 Identity = 60/191 (31.41%), Postives = 103/191 (53.93%), Query Frame = 2 Query: 5 LLPLRLWVFGGRLNVDPVTAAILGLSILLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCPPYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVWW 577 +L L W+F L VD T AI+ ++ +L+ G+VTW++ + W+TL W+ +I ++ L+K W ++ + G ++F ++I L YFFASG+A+I AM F +A+ G P A+ L F ++ G +THYG + PV +G Y + WW G +++I+ ++ + +G WW Sbjct: 279 VLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHG-NVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWW 468
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: CITT_ECOLI (Citrate carrier OS=Escherichia coli (strain K12) GN=citT PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.646e-24 Identity = 63/189 (33.33%), Postives = 99/189 (52.38%), Query Frame = 2 Query: 2 LLLPLRLWVFGGRLNVDPVTAAILGLSILLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASAL-GCPPYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVG 565 +LL L LWVFG + ++ +L +S++L VV WK+ + AW+TL A L+ MA L + G I WF+ T+ + G S + +L+L+++++HY FAS +AH M L+V + G P + ++L +MG LT Y G + YG YV +W G I ++ I + L VG Sbjct: 294 VLLSLGLWVFGSEV-INATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMSTHLE--GFSPNATVIVLVLVFYFAHYLFASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYISMLLLVG 479
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: CITT_ECO57 (Citrate carrier OS=Escherichia coli O157:H7 GN=citT PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.646e-24 Identity = 63/189 (33.33%), Postives = 99/189 (52.38%), Query Frame = 2 Query: 2 LLLPLRLWVFGGRLNVDPVTAAILGLSILLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASAL-GCPPYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVG 565 +LL L LWVFG + ++ +L +S++L VV WK+ + AW+TL A L+ MA L + G I WF+ T+ + G S + +L+L+++++HY FAS +AH M L+V + G P + ++L +MG LT Y G + YG YV +W G I ++ I + L VG Sbjct: 294 VLLSLGLWVFGSEV-INATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMSTHLE--GFSPNATVIVLVLVFYFAHYLFASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYISMLLLVG 479
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: TTDT_SHISS (L-tartrate/succinate antiporter OS=Shigella sonnei (strain Ss046) GN=ttdT PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 63/194 (32.47%), Postives = 105/194 (54.12%), Query Frame = 2 Query: 14 LRLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVW 574 L LW+FGG D + AA++G S+ +L+ +++W + + AW+ W A+LI +A LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A + +A+AL P P F MV A L LT Y G +P++YG+ Y+P A +W G I ++ +++ + G +W Sbjct: 297 LVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLS--GYSPTMVMVALIVVFYLLRYFFASATAYTSAL--APMMIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLLW 481
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: TTDT_SHIDS (L-tartrate/succinate antiporter OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ttdT PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 63/194 (32.47%), Postives = 105/194 (54.12%), Query Frame = 2 Query: 14 LRLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVW 574 L LW+FGG D + AA++G S+ +L+ +++W + + AW+ W A+LI +A LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A + +A+AL P P F MV A L LT Y G +P++YG+ Y+P A +W G I ++ +++ + G +W Sbjct: 297 LVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLS--GYSPTMVMVALIVVFYLLRYFFASATAYTSAL--APMMIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLLW 481
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: TTDT_SHIBS (L-tartrate/succinate antiporter OS=Shigella boydii serotype 4 (strain Sb227) GN=ttdT PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 63/194 (32.47%), Postives = 105/194 (54.12%), Query Frame = 2 Query: 14 LRLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVW 574 L LW+FGG D + AA++G S+ +L+ +++W + + AW+ W A+LI +A LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A + +A+AL P P F MV A L LT Y G +P++YG+ Y+P A +W G I ++ +++ + G +W Sbjct: 297 LVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLS--GYSPTMVMVALIVVFYLLRYFFASATAYTSAL--APMMIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLLW 481
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: TTDT_ECOLI (L-tartrate/succinate antiporter OS=Escherichia coli (strain K12) GN=ttdT PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 63/194 (32.47%), Postives = 105/194 (54.12%), Query Frame = 2 Query: 14 LRLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVW 574 L LW+FGG D + AA++G S+ +L+ +++W + + AW+ W A+LI +A LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A + +A+AL P P F MV A L LT Y G +P++YG+ Y+P A +W G I ++ +++ + G +W Sbjct: 297 LVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLS--GYSPTMVMVALIVVFYLLRYFFASATAYTSAL--APMMIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLLW 481 The following BLAST results are available for this feature:
BLAST of CF834784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834784 ID=CF834784; Name=CF834784; organism=Citrus sinensis; type=EST; length=585bpback to top |