CF834810
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834810 vs. ExPASy Swiss-Prot
Match: RAN1B_LOTJA (GTP-binding nuclear protein Ran1B (Fragment) OS=Lotus japonicus GN=RAN1B PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.707e-18 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = -2 Query: 250 NLHFVESPALAPPEVQIDLAAQQQHEDELAAAASQPLPDEDDDAFE 387 NLHFVESPALAPPEVQIDLAAQQQHE ELAAAASQPLPD+DDDAF+ Sbjct: 164 NLHFVESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDAFD 209
BLAST of CF834810 vs. ExPASy Swiss-Prot
Match: RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 4.842e-18 Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = -2 Query: 250 NLHFVESPALAPPEVQIDLAAQQQHEDELAAAASQPLPDEDDDAFE 387 NLHFVESPALAPPEVQIDLAAQQQHE ELAAAASQPLPD+DDD FE Sbjct: 176 NLHFVESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221
BLAST of CF834810 vs. ExPASy Swiss-Prot
Match: RAN1A_LOTJA (GTP-binding nuclear protein Ran1A (Fragment) OS=Lotus japonicus GN=RAN1A PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.409e-17 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = -2 Query: 250 NLHFVESPALAPPEVQIDLAAQQQHEDELAAAASQPLPDEDDDAFE 387 NLHFVESPALAPPEVQIDLAAQQQHE ELA AASQPLPD+DDDAF+ Sbjct: 164 NLHFVESPALAPPEVQIDLAAQQQHEAELAQAASQPLPDDDDDAFD 209
BLAST of CF834810 vs. ExPASy Swiss-Prot
Match: RANA1_TOBAC (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.139e-17 Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = -2 Query: 250 NLHFVESPALAPPEVQIDLAAQQQHEDELAAAASQPLPDEDDDAFE 387 NLHFVESPALAPPEVQIDLAAQQQHE ELAAAASQPLPD+DD+ F+ Sbjct: 176 NLHFVESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDETFD 221
BLAST of CF834810 vs. ExPASy Swiss-Prot
Match: RAN2_ARATH (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana GN=RAN2 PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 5.919e-16 Identity = 38/46 (82.61%), Postives = 44/46 (95.65%), Query Frame = -2 Query: 250 NLHFVESPALAPPEVQIDLAAQQQHEDELAAAASQPLPDEDDDAFE 387 NLHFVESPALAPPEV +D+AAQQQ+E +LAAAA+QPLPD+DDDAFE Sbjct: 176 NLHFVESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221
BLAST of CF834810 vs. ExPASy Swiss-Prot
Match: RAN_VICFA (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.730e-16 Identity = 37/46 (80.43%), Postives = 43/46 (93.48%), Query Frame = -2 Query: 250 NLHFVESPALAPPEVQIDLAAQQQHEDELAAAASQPLPDEDDDAFE 387 NLHFVESPALAPPEVQID+A QQ+HE+E+ AA+QPLPD+DDDAFE Sbjct: 176 NLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPDDDDDAFE 221
BLAST of CF834810 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.722e-15 Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = -2 Query: 250 NLHFVESPALAPPEVQIDLAAQQQHEDELAAAASQPLPDEDDDAFE 387 NLHFVE+PALAPP+V IDLAAQQQHE ELAAAA+QPLPD+DDD E Sbjct: 176 NLHFVETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221
BLAST of CF834810 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.722e-15 Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = -2 Query: 250 NLHFVESPALAPPEVQIDLAAQQQHEDELAAAASQPLPDEDDDAFE 387 NLHFVE+PALAPP+V IDLAAQQQHE ELAAAA+QPLPD+DDD E Sbjct: 176 NLHFVETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221
BLAST of CF834810 vs. ExPASy Swiss-Prot
Match: RAN2_SOLLC (GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.938e-15 Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = -2 Query: 250 NLHFVESPALAPPEVQIDLAAQQQHEDELAAAASQPLPDEDDDAFE 387 NLHFVESPALAPPEVQIDLAAQ HE EL AA +QPLPD+DD+AFE Sbjct: 176 NLHFVESPALAPPEVQIDLAAQALHEQELQAALNQPLPDDDDEAFE 221
BLAST of CF834810 vs. ExPASy Swiss-Prot
Match: RAN1_SOLLC (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.544e-15 Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = -2 Query: 250 NLHFVESPALAPPEVQIDLAAQQQHEDELAAAASQPLPDEDDDAFE 387 NLHFVESPALAPPEV IDLAAQ HE+EL AA+QPLPD+DD+AFE Sbjct: 176 NLHFVESPALAPPEVHIDLAAQALHEEELQQAANQPLPDDDDEAFE 221 The following BLAST results are available for this feature:
BLAST of CF834810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834810 ID=CF834810; Name=CF834810; organism=Citrus sinensis; type=EST; length=388bpback to top |