CF834895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834895 vs. ExPASy Swiss-Prot
Match: PFD4_AVEFA (Probable prefoldin subunit 4 OS=Avena fatua GN=VIP3 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.284e-41 Identity = 80/125 (64.00%), Postives = 98/125 (78.40%), Query Frame = 3 Query: 21 EQAEKSDTVVPWEDQQNINKFSKLNNRFHELEDEIKFAKETNDNLEDAGNELILTDEDIVRFQIGEVFAHVPREEVETRIEEMKEVNSXXXXXXXXXXXXVLAQMNELKKILYGKFRDSINLEED 395 +Q + ++ V WEDQQNIN+F +LNNRFHEL DEI+ AKE N+NLEDAGNELIL DED+VRFQIGEVFAH+P ++VE R+E+MKE + +LAQM ELKKILYGKF+D+INLEED Sbjct: 2 QQGDGTEAQVTWEDQQNINRFGRLNNRFHELTDEIRLAKEANENLEDAGNELILCDEDVVRFQIGEVFAHMPMDDVEARLEQMKEDAAKKLERLEEEKESILAQMAELKKILYGKFKDAINLEED 126
BLAST of CF834895 vs. ExPASy Swiss-Prot
Match: PFD4_ARATH (Probable prefoldin subunit 4 OS=Arabidopsis thaliana GN=API3 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 7.561e-38 Identity = 77/120 (64.17%), Postives = 92/120 (76.67%), Query Frame = 3 Query: 36 SDTVVPWEDQQNINKFSKLNNRFHELEDEIKFAKETNDNLEDAGNELILTDEDIVRFQIGEVFAHVPREEVETRIEEMKEVNSXXXXXXXXXXXXVLAQMNELKKILYGKFRDSINLEED 395 S+ V WEDQQNIN FS+LNNR H+L+D+IK AKE +NLEDAGNELIL DE++VRFQIGEVFAHVPR++VET+IEEMKE ++ QM LKK+LY KF+DSINLEED Sbjct: 9 SEMEVTWEDQQNINIFSRLNNRVHDLDDDIKSAKEKCENLEDAGNELILADEEMVRFQIGEVFAHVPRDDVETKIEEMKEATCKSLEKLEQEKESIVTQMAALKKVLYAKFKDSINLEED 128
BLAST of CF834895 vs. ExPASy Swiss-Prot
Match: PFD4_HUMAN (Prefoldin subunit 4 OS=Homo sapiens GN=PFDN4 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.887e-15 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 21 EQAEKSDTVVPWEDQQNINKFSKLNNRFHELEDEIKFAKETNDNLEDAGNELILTDED--IVRFQIGEVFAHVPREEVETRIEEMKEVNSXXXXXXXXXXXXVLAQMNELKKILYGKFRDSINLEED 395 ++A D V +EDQQ INKF++ +R EL++EI+ K+ NLEDA ++++L D+D ++ +QIG+VF +EE + +EE K+ + + +LK LY KF +INLE D Sbjct: 6 KKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNINLEAD 132
BLAST of CF834895 vs. ExPASy Swiss-Prot
Match: PFD4_BOVIN (Prefoldin subunit 4 OS=Bos taurus GN=PFDN4 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.994e-15 Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 3 Query: 21 EQAEKSDTVVPWEDQQNINKFSKLNNRFHELEDEIKFAKETNDNLEDAGNELILTDED--IVRFQIGEVFAHVPREEVETRIEEMKEVNSXXXXXXXXXXXXVLAQMNELKKILYGKFRDSINLEED 395 ++A D V +EDQQ INKF++ +R EL++EI+ K+ NLEDA +++L D+D ++ +QIG+VF +EE + +EE K+ + + +LK LY KF +INLE D Sbjct: 6 KKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACEDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNINLEAD 132
BLAST of CF834895 vs. ExPASy Swiss-Prot
Match: PFD4_YEAST (Prefoldin subunit 4 OS=Saccharomyces cerevisiae GN=GIM3 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.099e-12 Identity = 41/123 (33.33%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 24 QAEKSDTVVPWEDQQNINKFSKLNNRFHELEDEIKFAKETNDNLEDAGNELILTDED-IVRFQIGEVFAHVPREEVETRIEEMKEVNSXXXXXXXXXXXXVLAQMNELKKILYGKFRDSINLE 389 Q ++++T V +EDQQ IN+FSKL R + E+ +E + L+D E+ L DED V++++G++F + + +V ++E+ E + ++++ LK ILY KF D+INLE Sbjct: 6 QGQRNNTQVTFEDQQKINEFSKLIMRKDAIAQELSLQREEKEYLDDVSLEIELIDEDEPVQYKVGDLFIFMKQSKVTAQLEKDAERLDNKIETLEDKQRDIDSRLDALKAILYAKFGDNINLE 128
BLAST of CF834895 vs. ExPASy Swiss-Prot
Match: PFD4_DICDI (Probable prefoldin subunit 4 OS=Dictyostelium discoideum GN=pfdn4 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.199e-12 Identity = 46/126 (36.51%), Postives = 67/126 (53.17%), Query Frame = 3 Query: 30 EKSDTVVPWE----DQQNINKFSKLNNRFHELEDEIKFAKETNDNLEDAGNELILTDEDI-VRFQIGEVFAHVPREEVETRIEEMKEVNSXXXXXXXXXXXXVLAQMNELKKILYGKFRDSINLEE 392 EK D V+ E DQ+ IN F +LNNR HEL E K +E + D+ ++L + D+D ++ +GE F V +E+ E+ IE+ + + ELK ILY KF++SINLEE Sbjct: 7 EKVDEVLETEVCAADQKMINLFGRLNNRKHELMREKKAKQEDLEKATDSQDDLFIADDDSKFKYSMGEAFLEVNKEDAESLIEKYINKLEEDIKKIDSDINDINEKHKELKVILYAKFKNSINLEE 132 The following BLAST results are available for this feature:
BLAST of CF834895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834895 ID=CF834895; Name=CF834895; organism=Citrus sinensis; type=EST; length=590bpback to top |