CF834949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834949 vs. ExPASy Swiss-Prot
Match: R27A2_ARATH (60S ribosomal protein L27a-2 OS=Arabidopsis thaliana GN=RPL27AB PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.363e-27 Identity = 55/70 (78.57%), Postives = 66/70 (94.29%), Query Frame = -1 Query: 200 LRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTADE 409 LRNKF CPIVN+DKLWS+VP++VKAK+SKDNVP+IDVTQ G+FKVLGKG LPEN+P VVKAKL+SKTA++ Sbjct: 64 LRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEK 133
BLAST of CF834949 vs. ExPASy Swiss-Prot
Match: R27A3_ARATH (60S ribosomal protein L27a-3 OS=Arabidopsis thaliana GN=RPL27AC PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 7.493e-27 Identity = 54/70 (77.14%), Postives = 66/70 (94.29%), Query Frame = -1 Query: 200 LRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTADE 409 LRNKF CPIVN+DKLWS+VP++VKAK++KDNVP+IDVTQ G+FKVLGKG LPEN+P VVKAKL+SKTA++ Sbjct: 64 LRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEK 133
BLAST of CF834949 vs. ExPASy Swiss-Prot
Match: RL27A_TETTH (60S ribosomal protein L27a OS=Tetrahymena thermophila GN=RPL27A PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.121e-17 Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = -1 Query: 203 RNKFHCPIVNVDKLWSMVPQEVKAKASKD--NVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAD 406 +N HCP+VN+DKLWS+V + K ++D VP+IDVT+ G+FKVLGKG LP NQPVVVKAK SKTA+ Sbjct: 67 KNPLHCPVVNIDKLWSLVSDATRQKYAEDKKKVPVIDVTKAGFFKVLGKGRLP-NQPVVVKAKYFSKTAE 135
BLAST of CF834949 vs. ExPASy Swiss-Prot
Match: RL27A_OSCBR (60S ribosomal protein L27a OS=Oscheius brevesophaga GN=rpl-27a PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.015e-15 Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = -1 Query: 203 RNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAD 406 +N +CP VNVD+LW++VP+E K K S + P+ID + GYFKVLGKG+LP+ QP++VKAK S A+ Sbjct: 65 KNHHYCPTVNVDRLWALVPEEQKTKVSAEKAPVIDCVKAGYFKVLGKGLLPK-QPLIVKAKFFSHEAE 131
BLAST of CF834949 vs. ExPASy Swiss-Prot
Match: RL27A_DICDI (60S ribosomal protein L27a OS=Dictyostelium discoideum GN=rpl27a PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.038e-15 Identity = 35/73 (47.95%), Postives = 55/73 (75.34%), Query Frame = -1 Query: 200 LRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTADE 409 LRN++HCP V+++K+W++VP+ V+ + N P++DVTQ G+FKVLG G+LP QP++VKA+ SK A++ Sbjct: 64 LRNQYHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLGHGILP-TQPIIVKARYFSKVAEK 135
BLAST of CF834949 vs. ExPASy Swiss-Prot
Match: RL27A_EUPCR (60S ribosomal protein L27a OS=Euplotes crassus GN=RPL27A PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.914e-14 Identity = 38/72 (52.78%), Postives = 55/72 (76.39%), Query Frame = -1 Query: 200 LRNKFHCPIVNVDKLWSMVPQEVKAKASKDN--VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTADE 409 +RN+++CP +N+ KLWS+V +E + KA D V +IDV + GY+KVLGKG+LPE P+VVKAKL + TA++ Sbjct: 64 MRNQYYCPSINLSKLWSLVTEEERQKAQTDKSKVILIDVVKHGYYKVLGKGLLPE-VPLVVKAKLFTPTAEK 134
BLAST of CF834949 vs. ExPASy Swiss-Prot
Match: RL27A_RAT (60S ribosomal protein L27a OS=Rattus norvegicus GN=Rpl27a PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 4.265e-14 Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = -1 Query: 200 RNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTADE 406 RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ A+E Sbjct: 65 RNQSFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEE 135
BLAST of CF834949 vs. ExPASy Swiss-Prot
Match: RL27A_PONAB (60S ribosomal protein L27a OS=Pongo abelii GN=RPL27A PE=2 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 4.265e-14 Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = -1 Query: 200 RNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTADE 406 RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ A+E Sbjct: 65 RNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEE 135
BLAST of CF834949 vs. ExPASy Swiss-Prot
Match: RL27A_PANTR (60S ribosomal protein L27a OS=Pan troglodytes GN=RPL27A PE=2 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 4.265e-14 Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = -1 Query: 200 RNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTADE 406 RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ A+E Sbjct: 65 RNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEE 135
BLAST of CF834949 vs. ExPASy Swiss-Prot
Match: RL27A_MACFA (60S ribosomal protein L27a OS=Macaca fascicularis GN=RPL27A PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.265e-14 Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = -1 Query: 200 RNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTADE 406 RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ A+E Sbjct: 65 RNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEE 135 The following BLAST results are available for this feature:
BLAST of CF834949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834949 ID=CF834949; Name=CF834949; organism=Citrus sinensis; type=EST; length=409bpback to top |