CF835159
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835159 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.457e-43 Identity = 100/189 (52.91%), Postives = 111/189 (58.73%), Query Frame = -1 Query: 202 SKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXSAPVATXXXXXXXXXXXXXXXXXXD------LFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 750 SK P+SE+VNVSRW+ HIDALLRI S+P+ + LFG SVL+D+KPWDDETDMKKLEEAVRS+QMEGL WGASKL PVGYGIKKL IM TIVDDLVS+DT+IEE L EPINEYVQSCDIVAFNKI Sbjct: 43 SKPPTSEFVNVSRWFNHIDALLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of CF835159 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 1.457e-43 Identity = 99/189 (52.38%), Postives = 111/189 (58.73%), Query Frame = -1 Query: 202 SKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXSAPVATXXXXXXXXXXXXXXXXXXD------LFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 750 +K P+S+YVN SRWY HIDALLRI SAP+ + LFG SVL+D+KPWDDETDMKKLEEAV+S+QMEGL WGASKL PVGYGIKKLQI+ TIVDDLVS+DT+IEE L EPINEYVQSCDIVAFNKI Sbjct: 43 AKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of CF835159 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 172.555 bits (436), Expect = 2.104e-42 Identity = 97/183 (53.01%), Postives = 109/183 (59.56%), Query Frame = -1 Query: 202 SKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXSAPVATXXXXXXXXXXXXXXXXXXDLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 750 +K PSS+YVNVSRWY H++ALLRI S+ DLFG SVLLDVKPWDDETDM KLEEAVRS++M+GLLWGASKL VGYGIKKLQIMLTIVDDLVSVD L+E++L EP NEY+QSCDIVAFNKI Sbjct: 44 AKPPSSKYVNVSRWYNHVEALLRISGVSAEGCGVTVEGSSVATPPVADTKASAAEDDDDDDVDLFGEETEEEKKASEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226
BLAST of CF835159 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 3.968e-41 Identity = 99/186 (53.23%), Postives = 111/186 (59.68%), Query Frame = -1 Query: 202 SKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXSA-PVATXXXXXXXXXXXXXXXXXXD--LFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 750 S APSS Y NV+RW+ HIDALLR+ +A P A+ D LFG SVLLDVKPWDDETDM KLEEAVR+V+MEGLLWGASKL PVGYGIKKLQIM+TIVDDLVSVD+LIE++ EP NEY+QSCDIVAFNKI Sbjct: 44 STAPSSSYTNVARWFTHIDALLRLSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229
BLAST of CF835159 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 1.155e-40 Identity = 94/181 (51.93%), Postives = 107/181 (59.12%), Query Frame = -1 Query: 202 APSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXSAPVATXXXXXXXXXXXXXXXXXXDLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 744 AP++ YVNV+RWY HI ALLR +A + DLFG SVLLDVKPWDDETDM KLEEAVR+V+MEGLLWGASKL PVGYGIKKLQIM+TIVDDLVSVD+LIE++ EP NE++QSCDIVAFNKI Sbjct: 46 APAASYVNVTRWYDHISALLRSSGVTAEGEGVKVESTACSVSPTADQKAPAADEEDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI 226
BLAST of CF835159 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 1.508e-40 Identity = 82/87 (94.25%), Postives = 84/87 (96.55%), Query Frame = -1 Query: 202 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 462 VLLDVKPWDDETDMKKLEEAVRSVQMEGL WGASKL PVGYGIKKLQIMLTIVDDLVSVD+LIEEHL EEPINE+VQSCDIVAFNKI Sbjct: 138 VLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFVQSCDIVAFNKI 224
BLAST of CF835159 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 2.572e-40 Identity = 104/187 (55.61%), Postives = 109/187 (58.29%), Query Frame = -1 Query: 202 KAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXSAP---VATXXXXXXXXXXXXXXXXXXD-LFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 747 KA + YVNVSRWYKHIDALLRI +AP VAT LFG S VLLDVKPWDDETDMKKLEEAVRSVQ EGL GASKL PVGYGIKKL IM+TIVDDLVSVD LIE++L EPINEYVQSCDIVAFNKI Sbjct: 45 KASLASYVNVSRWYKHIDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADDDDDDDVDLFGEETEEEKKAAEERAAAAAAKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231
BLAST of CF835159 vs. ExPASy Swiss-Prot
Match: EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 8.562e-36 Identity = 74/87 (85.06%), Postives = 78/87 (89.66%), Query Frame = -1 Query: 202 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 462 VLL+VKPWDDETDMKKLEEAVRSVQM GL WGASKL PVGYGIKKL IM+TIVDDLVSVD LIE+HL EP NEY+QS DIVAFNKI Sbjct: 142 VLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228
BLAST of CF835159 vs. ExPASy Swiss-Prot
Match: EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 5.550e-35 Identity = 75/87 (86.21%), Postives = 78/87 (89.66%), Query Frame = -1 Query: 202 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 462 VL+D+KPWDDETDMKKLEEAVRSVQMEGL WGASKL PVGYGIKKLQIMLTI+DDL S T IEE L E PINEYVQSCDIVAFNKI Sbjct: 132 VLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLTIIDDLAS--TPIEEVLCEAPINEYVQSCDIVAFNKI 216
BLAST of CF835159 vs. ExPASy Swiss-Prot
Match: EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.615e-34 Identity = 71/87 (81.61%), Postives = 75/87 (86.21%), Query Frame = -1 Query: 202 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 462 VL+DVKPWDDETDMKKLEEAVR V+M GL WGASKL PVGYGIKKL IM TIVDDLVS D LIE+ L EP NEY+QSCDIVAFNKI Sbjct: 138 VLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224 The following BLAST results are available for this feature:
BLAST of CF835159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835159 ID=CF835159; Name=CF835159; organism=Citrus sinensis; type=EST; length=750bpback to top |