CF835243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835243 vs. ExPASy Swiss-Prot
Match: SMT3_ORYSJ (Ubiquitin-like protein SMT3 OS=Oryza sativa subsp. japonica GN=SMT3 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.680e-33 Identity = 68/80 (85.00%), Postives = 73/80 (91.25%), Query Frame = 2 Query: 65 AHINLKVKGQDGNEGVFGIKRPTQLKKLMNAYCDIQSVELNSLAFLFDGRRLRGHQTPDELEMEDGDEIDALLHQTGGML 304 AHINLKVKGQDGNE F IKR TQLKKLMNAYCD QSV++N++AFLFDGRRLRG QTPDELEMEDGDEIDA+LHQTGG L Sbjct: 19 AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGCL 98
BLAST of CF835243 vs. ExPASy Swiss-Prot
Match: SMT3_ARATH (Ubiquitin-like protein SMT3 OS=Arabidopsis thaliana GN=SMT3 PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 7.797e-33 Identity = 68/85 (80.00%), Postives = 73/85 (85.88%), Query Frame = 2 Query: 44 KSPTINQAHINLKVKGQDGNEGVFGIKRPTQLKKLMNAYCDIQSVELNSLAFLFDGRRLRGHQTPDELEMEDGDEIDALLHQTGG 298 K P AHINLKVKGQDGNE F IKR TQLKKLMNAYCD QSV++NS+AFLFDGRRLR QTPDEL+MEDGDEIDA+LHQTGG Sbjct: 9 KKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGG 93
BLAST of CF835243 vs. ExPASy Swiss-Prot
Match: PMT3_SCHPO (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe GN=pmt3 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 3.757e-19 Identity = 46/77 (59.74%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 68 HINLKVKGQDGNEGVFGIKRPTQLKKLMNAYCDIQSVELNSLAFLFDGRRLRGHQTPDELEMEDGDEIDALLHQTGG 298 HINLKV GQD NE F IK+ T+ KLM YC Q +NSL FL DG R+R QTP EL+MEDGD+I+A+L Q GG Sbjct: 35 HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGERIRPDQTPAELDMEDGDQIEAVLEQLGG 111
BLAST of CF835243 vs. ExPASy Swiss-Prot
Match: SUMO2_RAT (Small ubiquitin-related modifier 2 OS=Rattus norvegicus GN=Sumo2 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.279e-16 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 2 Query: 53 TINQAHINLKVKGQDGNEGVFGIKRPTQLKKLMNAYCDIQSVELNSLAFLFDGRRLRGHQTPDELEMEDGDEIDALLHQTGGM 301 T N HINLKV GQDG+ F IKR T L KLM AYC+ Q + + + F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 12 TENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 94
BLAST of CF835243 vs. ExPASy Swiss-Prot
Match: SUMO2_PIG (Small ubiquitin-related modifier 2 OS=Sus scrofa GN=SUMO2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.279e-16 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 2 Query: 53 TINQAHINLKVKGQDGNEGVFGIKRPTQLKKLMNAYCDIQSVELNSLAFLFDGRRLRGHQTPDELEMEDGDEIDALLHQTGGM 301 T N HINLKV GQDG+ F IKR T L KLM AYC+ Q + + + F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 12 TENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 94
BLAST of CF835243 vs. ExPASy Swiss-Prot
Match: SUMO2_MOUSE (Small ubiquitin-related modifier 2 OS=Mus musculus GN=Sumo2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.279e-16 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 2 Query: 53 TINQAHINLKVKGQDGNEGVFGIKRPTQLKKLMNAYCDIQSVELNSLAFLFDGRRLRGHQTPDELEMEDGDEIDALLHQTGGM 301 T N HINLKV GQDG+ F IKR T L KLM AYC+ Q + + + F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 12 TENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 94
BLAST of CF835243 vs. ExPASy Swiss-Prot
Match: SUMO2_MACFA (Small ubiquitin-related modifier 2 OS=Macaca fascicularis GN=SUMO2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.279e-16 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 2 Query: 53 TINQAHINLKVKGQDGNEGVFGIKRPTQLKKLMNAYCDIQSVELNSLAFLFDGRRLRGHQTPDELEMEDGDEIDALLHQTGGM 301 T N HINLKV GQDG+ F IKR T L KLM AYC+ Q + + + F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 12 TENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 94
BLAST of CF835243 vs. ExPASy Swiss-Prot
Match: SUMO2_HUMAN (Small ubiquitin-related modifier 2 OS=Homo sapiens GN=SUMO2 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.279e-16 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 2 Query: 53 TINQAHINLKVKGQDGNEGVFGIKRPTQLKKLMNAYCDIQSVELNSLAFLFDGRRLRGHQTPDELEMEDGDEIDALLHQTGGM 301 T N HINLKV GQDG+ F IKR T L KLM AYC+ Q + + + F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 12 TENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 94
BLAST of CF835243 vs. ExPASy Swiss-Prot
Match: SUMO2_CRIGR (Small ubiquitin-related modifier 2 OS=Cricetulus griseus GN=SUMO2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.279e-16 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 2 Query: 53 TINQAHINLKVKGQDGNEGVFGIKRPTQLKKLMNAYCDIQSVELNSLAFLFDGRRLRGHQTPDELEMEDGDEIDALLHQTGGM 301 T N HINLKV GQDG+ F IKR T L KLM AYC+ Q + + + F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 12 TENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 94
BLAST of CF835243 vs. ExPASy Swiss-Prot
Match: SUMO2_CHICK (Small ubiquitin-related modifier 2 OS=Gallus gallus GN=SUMO2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.279e-16 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 2 Query: 53 TINQAHINLKVKGQDGNEGVFGIKRPTQLKKLMNAYCDIQSVELNSLAFLFDGRRLRGHQTPDELEMEDGDEIDALLHQTGGM 301 T N HINLKV GQDG+ F IKR T L KLM AYC+ Q + + + F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 12 TENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 94 The following BLAST results are available for this feature:
BLAST of CF835243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835243 ID=CF835243; Name=CF835243; organism=Citrus sinensis; type=EST; length=539bpback to top |