CF835313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835313 vs. ExPASy Swiss-Prot
Match: RS30_ARATH (40S ribosomal protein S30 OS=Arabidopsis thaliana GN=RPS30A PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 7.002e-22 Identity = 50/62 (80.65%), Postives = 52/62 (83.87%), Query Frame = 3 Query: 60 MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK 245 MGKVHGSLARAGKVRGQTP PRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSEK Sbjct: 1 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSSEK 62
BLAST of CF835313 vs. ExPASy Swiss-Prot
Match: RS30_RAT (40S ribosomal protein S30 OS=Rattus norvegicus GN=Fau PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.197e-13 Identity = 37/58 (63.79%), Postives = 41/58 (70.69%), Query Frame = 3 Query: 66 KVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 239 KVHGSLARAGKVRGQTP GRA +RMQYNRRFV V FGKK+GPN++ Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58
BLAST of CF835313 vs. ExPASy Swiss-Prot
Match: RS30_PONAB (40S ribosomal protein S30 OS=Pongo abelii GN=FAU PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.197e-13 Identity = 37/58 (63.79%), Postives = 41/58 (70.69%), Query Frame = 3 Query: 66 KVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 239 KVHGSLARAGKVRGQTP GRA +RMQYNRRFV V FGKK+GPN++ Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58
BLAST of CF835313 vs. ExPASy Swiss-Prot
Match: RS30_PIG (40S ribosomal protein S30 OS=Sus scrofa GN=FAU PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.197e-13 Identity = 37/58 (63.79%), Postives = 41/58 (70.69%), Query Frame = 3 Query: 66 KVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 239 KVHGSLARAGKVRGQTP GRA +RMQYNRRFV V FGKK+GPN++ Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58
BLAST of CF835313 vs. ExPASy Swiss-Prot
Match: RS30_MUSSI (40S ribosomal protein S30 OS=Mus spicilegus GN=Fau PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.197e-13 Identity = 37/58 (63.79%), Postives = 41/58 (70.69%), Query Frame = 3 Query: 66 KVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 239 KVHGSLARAGKVRGQTP GRA +RMQYNRRFV V FGKK+GPN++ Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58
BLAST of CF835313 vs. ExPASy Swiss-Prot
Match: RS30_MOUSE (40S ribosomal protein S30 OS=Mus musculus GN=Fau PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.197e-13 Identity = 37/58 (63.79%), Postives = 41/58 (70.69%), Query Frame = 3 Query: 66 KVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 239 KVHGSLARAGKVRGQTP GRA +RMQYNRRFV V FGKK+GPN++ Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58
BLAST of CF835313 vs. ExPASy Swiss-Prot
Match: RS30_HUMAN (40S ribosomal protein S30 OS=Homo sapiens GN=FAU PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.197e-13 Identity = 37/58 (63.79%), Postives = 41/58 (70.69%), Query Frame = 3 Query: 66 KVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 239 KVHGSLARAGKVRGQTP GRA +RMQYNRRFV V FGKK+GPN++ Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58
BLAST of CF835313 vs. ExPASy Swiss-Prot
Match: RS30_CRIGR (40S ribosomal protein S30 OS=Cricetulus griseus GN=FAU PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.197e-13 Identity = 37/58 (63.79%), Postives = 41/58 (70.69%), Query Frame = 3 Query: 66 KVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 239 KVHGSLARAGKVRGQTP GRA +RMQYNRRFV V FGKK+GPN++ Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58
BLAST of CF835313 vs. ExPASy Swiss-Prot
Match: RS30_BOVIN (40S ribosomal protein S30 OS=Bos taurus GN=FAU PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.197e-13 Identity = 37/58 (63.79%), Postives = 41/58 (70.69%), Query Frame = 3 Query: 66 KVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 239 KVHGSLARAGKVRGQTP GRA +RMQYNRRFV V FGKK+GPN++ Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58
BLAST of CF835313 vs. ExPASy Swiss-Prot
Match: RS30_ORYLA (40S ribosomal protein S30 OS=Oryzias latipes GN=fau PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 3.851e-12 Identity = 35/58 (60.34%), Postives = 40/58 (68.97%), Query Frame = 3 Query: 66 KVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 239 KVHGSLARAGKVRGQTP GRA +R+QYNRRFV V FGKK+G N++ Sbjct: 1 KVHGSLARAGKVRGQTPNVDKHEEKEEEDGRAKRRIQYNRRFVNVVPTFGKKKGANAN 58 The following BLAST results are available for this feature:
BLAST of CF835313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835313 ID=CF835313; Name=CF835313; organism=Citrus sinensis; type=EST; length=457bpback to top |