CF835648

Overview
NameCF835648
Unique NameCF835648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835648 vs. ExPASy Swiss-Prot
Match: PR4A_TOBAC (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.165e-58
Identity = 103/144 (71.53%), Postives = 121/144 (84.03%), Query Frame = 1
Query:   19 MGRFGLCV-ILSLCLLVATASAQSASNVRATYHLYHPEQIGWDLTAASAFCATWDASKPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLDEGVFKKLDTNGIGYQQGFLTVSYEFVNCND 447
            +  + LCV +L + +++A A+AQSA+NVR+TYHLY+P+ I WDL AASAFCATWDA KPLAWRQKYGWTAFC   GP GQ +CGRCLRVTN+GTG Q  VRIVDQC+NGGLDLD  VF +LDTNG+GYQQG LTV+YEFVNCND
Sbjct:    4 VNNYKLCVALLIISMVMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNGVGYQQGHLTVNYEFVNCND 147          
BLAST of CF835648 vs. ExPASy Swiss-Prot
Match: PR4B_TOBAC (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 7.553e-58
Identity = 102/144 (70.83%), Postives = 120/144 (83.33%), Query Frame = 1
Query:   19 MGRFGLCV-ILSLCLLVATASAQSASNVRATYHLYHPEQIGWDLTAASAFCATWDASKPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLDEGVFKKLDTNGIGYQQGFLTVSYEFVNCND 447
            +  + LCV +L + +++A A+AQSA+NVR+TYHLY+P+ I WDL AASAFCATWDA KPLAWRQKYGWTAFC   GP GQ +CGRCLRVTN+GTG Q  VRIVDQC+NGGLDLD  VF +LDTNG+GYQQG L V+YEFVNCND
Sbjct:    4 VNNYKLCVALLIMSVMMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNGLGYQQGHLIVNYEFVNCND 147          
BLAST of CF835648 vs. ExPASy Swiss-Prot
Match: PRP2_SOLLC (Pathogenesis-related protein P2 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 8.641e-54
Identity = 94/137 (68.61%), Postives = 112/137 (81.75%), Query Frame = 1
Query:   34 LCVILSLC-LLVATASAQSASNVRATYHLYHPEQIGWDLTAASAFCATWDASKPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLDEGVFKKLDTNGIGYQQGFLTVSYEFVNC 441
            LCV   +  +++A A+AQSA+NVRATYHLY+P+ I WDL  AS +CATWDA KPL WR++YGWTAFC   GP GQA+CGRCLRVTN+GTG Q+ VRIVDQC NGGLDLD  VF +LDTNG+GYQ+G L V+YEFVNC
Sbjct:    7 LCVAFFVINMMMAVAAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPAGPTGQASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNVNYEFVNC 143          
BLAST of CF835648 vs. ExPASy Swiss-Prot
Match: WHW2_WHEAT (Wheatwin-2 OS=Triticum aestivum GN=PR4B PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.796e-50
Identity = 95/141 (67.38%), Postives = 106/141 (75.18%), Query Frame = 1
Query:   34 LCVILSLCLLVATASAQSASNVRATYHLYHPEQIGWDL--TAASAFCATWDASKPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLD-EGVFKKLDTNGIGYQQGFLTVSYEFVNCND 447
            + V   LC   A A+AQ A+NVRATYH Y P Q  WDL   A SA+CATWDASKPL+WR KYGWTAFC   G  GQAACG+CLRVTN  TGAQ   RIVDQCANGGLDLD + VF K+DTNGIGYQQG L V+Y+FV+C D
Sbjct:    8 MLVAALLCAAAAAATAQQATNVRATYHYYRPAQNNWDLGAPAVSAYCATWDASKPLSWRSKYGWTAFCGPAGAHGQAACGKCLRVTNPATGAQITARIVDQCANGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVDCRD 148          
BLAST of CF835648 vs. ExPASy Swiss-Prot
Match: WHW1_WHEAT (Wheatwin-1 OS=Triticum aestivum GN=PR4A PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.291e-49
Identity = 93/141 (65.96%), Postives = 107/141 (75.89%), Query Frame = 1
Query:   34 LCVILSLCLLVATASAQSASNVRATYHLYHPEQIGWDL--TAASAFCATWDASKPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLD-EGVFKKLDTNGIGYQQGFLTVSYEFVNCND 447
            + V+  LC   A A+AQ A+NVRATYH Y P Q  WDL   A SA+CATWDASKPL+WR KYGWTAFC   G  GQA+CG+CL+VTN  TGAQ   RIVDQCANGGLDLD + VF K+DTNGIGYQQG L V+Y+FV+C D
Sbjct:    6 MLVVALLCAAAAAATAQQATNVRATYHYYRPAQNNWDLGAPAVSAYCATWDASKPLSWRSKYGWTAFCGPAGAHGQASCGKCLQVTNPATGAQITARIVDQCANGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVDCRD 146          
BLAST of CF835648 vs. ExPASy Swiss-Prot
Match: WIN2_SOLTU (Wound-induced protein WIN2 OS=Solanum tuberosum GN=WIN2 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.154e-48
Identity = 82/121 (67.77%), Postives = 101/121 (83.47%), Query Frame = 1
Query:   85 SASNVRATYHLYHPEQIGWDLTAASAFCATWDASKPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLDEGVFKKLDTNGIGYQQGFLTVSYEFVNCND 447
            SA NVRATYH+Y+P+ +GWDL A SA+C+TWDA+KP AWR KYGWTAFC   GP G+ +CG+CLRVTN+ TGAQ  VRIVDQC+NGGLDLD  VF+++DT+G+G QQG L V+Y+FVNC D
Sbjct:   78 SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSCGKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNCGD 198          
BLAST of CF835648 vs. ExPASy Swiss-Prot
Match: BARW_HORVU (Barwin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.062e-47
Identity = 89/125 (71.20%), Postives = 99/125 (79.20%), Query Frame = 1
Query:   82 QSASNVRATYHLYHPEQIGWDL--TAASAFCATWDASKPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLD-EGVFKKLDTNGIGYQQGFLTVSYEFVNCND 447
            Q A++VRATYH Y P Q  WDL   A SA+CATWDASKPL+WR KYGWTAFC   GP GQAACG+CLRVTN  TGAQ   RIVDQCANGGLDLD + VF K+DTNGIGYQQG L V+Y+FV+C D
Sbjct:    1 QQANDVRATYHYYRPAQNNWDLGAPAVSAYCATWDASKPLSWRSKYGWTAFCGPAGPRGQAACGKCLRVTNPATGAQITARIVDQCANGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVDCRD 125          
BLAST of CF835648 vs. ExPASy Swiss-Prot
Match: WIN1_SOLTU (Wound-induced protein WIN1 OS=Solanum tuberosum GN=WIN1 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.834e-47
Identity = 80/121 (66.12%), Postives = 101/121 (83.47%), Query Frame = 1
Query:   85 SASNVRATYHLYHPEQIGWDLTAASAFCATWDASKPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLDEGVFKKLDTNGIGYQQGFLTVSYEFVNCND 447
            SA NVRATYH+Y+P+ +GWDL A SA+C+TWDA+KPL+WR+KYGWTAFC   GP G+ +CG+CLRVTN+ TGAQ  VRIVDQC+NGGLDLD  VF+++DT+G G  QG L V+Y+FV+C D
Sbjct:   79 SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSCGKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDCGD 199          
BLAST of CF835648 vs. ExPASy Swiss-Prot
Match: HEVE_HEVBR (Pro-hevein OS=Hevea brasiliensis GN=HEV1 PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 5.078e-46
Identity = 80/121 (66.12%), Postives = 101/121 (83.47%), Query Frame = 1
Query:   85 SASNVRATYHLYHPEQIGWDLTAASAFCATWDASKPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLDEGVFKKLDTNGIGYQQGFLTVSYEFVNCND 447
            SASNV ATYHLY+ +  GWDL AASA+C+TWDA+KP +WR KYGWTAFC   G  GQ++CG+CL VTN+GTGA+  VRIVDQC+NGGLDLD  VF++LDT+G GY++G +TV+Y+FV+C D
Sbjct:   69 SASNVLATYHLYNSQDHGWDLNAASAYCSTWDANKPYSWRSKYGWTAFCGPVGAHGQSSCGKCLSVTNTGTGAKTTVRIVDQCSNGGLDLDVNVFRQLDTDGKGYERGHITVNYQFVDCGD 189          
BLAST of CF835648 vs. ExPASy Swiss-Prot
Match: HEVL_ARATH (Hevein-like protein OS=Arabidopsis thaliana GN=HEL PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.477e-45
Identity = 80/122 (65.57%), Postives = 95/122 (77.87%), Query Frame = 1
Query:   82 QSASNVRATYHLYHPEQIGWDLTAASAFCATWDASKPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLDEGVFKKLDTNGIGYQQGFLTVSYEFVNCND 447
            +SASNVRATYH Y+P Q  WDL A SA+C+TWDA KP AWR KYGWTAFC   GP GQA+CG+CLRV N+ T A   VRIVDQC+NGGLDLD  +F ++DT+G GYQQG L V Y+FV+C +
Sbjct:   72 ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQASCGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDCGN 193          
The following BLAST results are available for this feature:
BLAST of CF835648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
PR4A_TOBAC1.165e-5871.53Pathogenesis-related protein PR-4A OS=Nicotiana ta... [more]
PR4B_TOBAC7.553e-5870.83Pathogenesis-related protein PR-4B OS=Nicotiana ta... [more]
PRP2_SOLLC8.641e-5468.61Pathogenesis-related protein P2 OS=Solanum lycoper... [more]
WHW2_WHEAT5.796e-5067.38Wheatwin-2 OS=Triticum aestivum GN=PR4B PE=1 SV=1[more]
WHW1_WHEAT1.291e-4965.96Wheatwin-1 OS=Triticum aestivum GN=PR4A PE=1 SV=1[more]
WIN2_SOLTU4.154e-4867.77Wound-induced protein WIN2 OS=Solanum tuberosum GN... [more]
BARW_HORVU2.062e-4771.20Barwin OS=Hordeum vulgare PE=1 SV=1[more]
WIN1_SOLTU7.834e-4766.12Wound-induced protein WIN1 OS=Solanum tuberosum GN... [more]
HEVE_HEVBR5.078e-4666.12Pro-hevein OS=Hevea brasiliensis GN=HEV1 PE=1 SV=2[more]
HEVL_ARATH1.477e-4565.57Hevein-like protein OS=Arabidopsis thaliana GN=HEL... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01K06_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01K06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835648 ID=CF835648; Name=CF835648; organism=Citrus sinensis; type=EST; length=630bp
AAAAATTAACACATTAATATGGGGAGGTTCGGTCTTTGTGTGATTCTGTC
ACTTTGTCTACTGGTGGCCACTGCTTCTGCCCAAAGTGCTTCTAATGTGA
GAGCCACGTATCATCTCTACCACCCTGAGCAAATTGGATGGGACTTGACG
GCAGCGAGCGCTTTCTGCGCAACATGGGATGCCAGCAAGCCCTTGGCCTG
GCGCCAGAAATATGGCTGGACCGCTTTCTGTCATTCGGGCGGACCCATTG
GACAAGCTGCTTGTGGCAGGTGCTTAAGGGTCACAAACAGTGGTACAGGA
GCCCAACAAATTGTGAGAATTGTTGATCAGTGTGCCAATGGAGGCTTAGA
TTTGGACGAAGGAGTGTTCAAGAAATTGGACACCAATGGAATAGGCTATC
AACAAGGCTTCCTTACTGTCAGCTACGAGTTTGTGAACTGCAATGATTAA
AGCACCATCTATAATTCCATGATCGATCGAAGCTTATTGCTGTAATAGGG
TTAATTTATTAATTAATTATCCCTCTATATATTTAGTTCATAAATAAAAT
AAACTTCTGATGAAGTATCAAGAAGTGCTCATGGGCACTACAGTTATGTA
ATAAAAGTTTCCTTTTTTTATCCCTTTAAA
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