CK739476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739476 vs. ExPASy Swiss-Prot
Match: PSAN_ARATH (Photosystem I reaction center subunit N, chloroplastic OS=Arabidopsis thaliana GN=PSAN PE=1 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 1.023e-52 Identity = 112/175 (64.00%), Postives = 128/175 (73.14%), Query Frame = 3 Query: 9 MAAMNSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGHK----MPVIRAQQVDVSKESRGTDGRRXXXXXXXXXXXXXXXXXXXXXXXXGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKMKDKYKCGSNVFWKW 521 MAAMNSSVL C+YAI+GS GS ELN K+ V++ G K MPVI+AQ+V V + G++GRR GVIDEYLERSK NKELND+KRLATSGANFARA+TVQFG+CKFPENFTGCQDLAKQKKVPFIS+D+ LEC+ KDKYKCGSNVFWKW Sbjct: 1 MAAMNSSVLTCSYAIAGS-GSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRV-VGDDVDGSNGRRSAMVFLAATLFSTAAVSASANA--GVIDEYLERSKTNKELNDKKRLATSGANFARAFTVQFGSCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW 171
BLAST of CK739476 vs. ExPASy Swiss-Prot
Match: PSAN_MAIZE (Photosystem I reaction center subunit N, chloroplastic (Fragment) OS=Zea mays GN=PSAN PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 4.928e-39 Identity = 71/84 (84.52%), Postives = 81/84 (96.43%), Query Frame = 3 Query: 270 VIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKMKDKYKCGSNVFWKW 521 + DEYLE+SKANKELND+KRLATSGANFARAYTV+FG+C+FP NFTGCQDLAKQKKVPFISDDLE+EC+ K+K+KCGSNVFWKW Sbjct: 29 IFDEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFISDDLEIECEGKEKFKCGSNVFWKW 112
BLAST of CK739476 vs. ExPASy Swiss-Prot
Match: PSAN_HORVU (Photosystem I reaction center subunit N, chloroplastic OS=Hordeum vulgare GN=PSAN PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.873e-38 Identity = 71/84 (84.52%), Postives = 79/84 (94.05%), Query Frame = 3 Query: 270 VIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKMKDKYKCGSNVFWKW 521 V DEYLE+SK NKELND+KR ATSGANFARAYTVQFG+CKFP NFTGCQDLAKQKKVPFI+DDLE+EC+ K+K+KCGSNVFWKW Sbjct: 62 VFDEYLEKSKLNKELNDKKRAATSGANFARAYTVQFGSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFWKW 145
BLAST of CK739476 vs. ExPASy Swiss-Prot
Match: PSAN_VOLCA (Photosystem I reaction center subunit N, chloroplastic OS=Volvox carteri GN=PSAN PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.141e-19 Identity = 45/79 (56.96%), Postives = 61/79 (77.22%), Query Frame = 3 Query: 267 GVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKMKDKYKCGS 503 GV+++ L +S ANK LN++KRLATS AN AR+ TV GTC+FPENF GC++LA K V +I++DL++EC+ KD CGS Sbjct: 54 GVVEDLLAKSAANKALNNKKRLATSYANLARSRTVYDGTCQFPENFFGCEELAFNKGVKYIAEDLKIECEGKDAKSCGS 132 The following BLAST results are available for this feature:
BLAST of CK739476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739476 ID=CK739476; Name=CK739476; organism=Citrus sinensis; type=EST; length=577bpback to top |