CK739480
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739480 vs. ExPASy Swiss-Prot
Match: NIFU3_ARATH (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.205e-58 Identity = 81/100 (81.00%), Postives = 93/100 (93.00%), Query Frame = 3 Query: 135 LKMGIETRLRDKIPEILEVEQILDTETG-LELNEENIEKVLAEIRPYLAGTGGGILELIQIDDYVVRVRLSGPAAGVMTVRVALTQKLREKIPSIAAVQL 431 LKMGIE+RLRDKIPEI+ VEQ L++ETG LELN+ENIEKVL+E+RPYL+GTGGG LEL++ID YVV+VRL+GPAAGVMTVRVALTQKLRE IPSI AVQL Sbjct: 135 LKMGIESRLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQKLRETIPSIGAVQL 234 HSP 2 Score: 89.7373 bits (221), Expect = 1.205e-58 Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 2 Query: 2 RVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTPKDG 145 RVLDEVRP LMADGGNVALHEIDGLVVVLKLQGACGSCPSS+MT K G Sbjct: 91 RVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMG 138
BLAST of CK739480 vs. ExPASy Swiss-Prot
Match: NIFU2_ARATH (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.602e-52 Identity = 73/99 (73.74%), Postives = 87/99 (87.88%), Query Frame = 3 Query: 135 LKMGIETRLRDKIPEILEVEQILDTETGLELNEENIEKVLAEIRPYLAGTGGGILELIQIDDYVVRVRLSGPAAGVMTVRVALTQKLREKIPSIAAVQL 431 +KMGIE RL +KIPEI+ VE + D ETGLELNEENIEKVL EIRPYL GT G L+L++I+D +V++R++GPAAGVMTVRVA+TQKLREKIPSIAAVQL Sbjct: 136 MKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQL 234 HSP 2 Score: 80.1073 bits (196), Expect = 2.602e-52 Identity = 38/47 (80.85%), Postives = 42/47 (89.36%), Query Frame = 2 Query: 5 VLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTPKDG 145 VLDE+RP LM+DGGNVALHEIDG +V +KLQGACGSCPSSTMT K G Sbjct: 93 VLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMG 139
BLAST of CK739480 vs. ExPASy Swiss-Prot
Match: NIFU1_ORYSJ (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.335e-44 Identity = 65/99 (65.66%), Postives = 80/99 (80.81%), Query Frame = 3 Query: 135 LKMGIETRLRDKIPEILEVEQILDTETGLELNEENIEKVLAEIRPYLAGTGGGILELIQIDDYVVRVRLSGPAAGVMTVRVALTQKLREKIPSIAAVQL 431 +K GIE RL +KIP++ VE + D ETGLELNEEN+EKVL EIRPYLAGTGGG L+ + I +V+VRL+GPAA V TVR+A+++KLREKIPSI VQL Sbjct: 126 IKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIVQL 224 HSP 2 Score: 70.8626 bits (172), Expect = 1.335e-44 Identity = 36/47 (76.60%), Postives = 39/47 (82.98%), Query Frame = 2 Query: 5 VLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTPKDG 145 VLD+VRP L ADGG+VALHEI G VV LKLQGACGSCPSS +T K G Sbjct: 83 VLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRG 129
BLAST of CK739480 vs. ExPASy Swiss-Prot
Match: NIFU1_ARATH (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 5.642e-12 Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 2 Query: 5 VLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMT 133 VL++VRP L++DGGNV + ++ VV LKLQGAC SCPSS+ T Sbjct: 93 VLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTT 135 HSP 2 Score: 36.1946 bits (82), Expect = 5.642e-12 Identity = 23/90 (25.56%), Postives = 48/90 (53.33%), Query Frame = 3 Query: 135 LKMGIETRLRDKIPEIL-EVEQILDTETGLELNEENIEKVLAEIRPYLAGTGGGILELIQIDDYVVRVRLSGPAAGVMTVRVALTQKLRE 401 + MGIE L++K + L ++ Q+ D E ++ E + L +RP + GG + E++ ++ V+ GP + M ++ A+ +K ++ Sbjct: 136 MTMGIERVLKEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRPAIKNYGGSV-EVLSVEGEDCVVKYVGPESIGMGIQAAIKEKFKD 223
BLAST of CK739480 vs. ExPASy Swiss-Prot
Match: NIFU_ANASL (Nitrogen fixation protein nifU (Fragment) OS=Anabaena sp. (strain L31) GN=nifU PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 4.936e-11 Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 2 Query: 2 RVLDE-VRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTPK 139 +VLDE VRP L+ADGG+V L+++DG +V + LQGACGSCPSST T K Sbjct: 46 KVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLK 92 HSP 2 Score: 25.409 bits (54), Expect = 4.936e-11 Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 135 LKMGIETRLRDKIPEILEVEQI 200 LK+ IE+RLRD+I L VE + Sbjct: 91 LKIAIESRLRDRINPSLVVEAV 112 The following BLAST results are available for this feature:
BLAST of CK739480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739480 ID=CK739480; Name=CK739480; organism=Citrus sinensis; type=EST; length=627bpback to top |