CK739565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739565 vs. ExPASy Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 4.146e-33 Identity = 62/103 (60.19%), Postives = 72/103 (69.90%), Query Frame = 2 Query: 77 FTGLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIP 385 FTGLKAG+ V ++ K SAS +P+LSIKA++KDVG I+VLLG DDGSLAFVPS FS+S GEKIVFKNNAGFPHN+VFDED IP Sbjct: 14 FTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAASAMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIP 116 HSP 2 Score: 40.0466 bits (92), Expect = 4.146e-33 Identity = 19/23 (82.61%), Postives = 19/23 (82.61%), Query Frame = 3 Query: 384 PSGVDVSKISMSTEDLLNGPGET 452 PSGVD SKISMS EDLLN GET Sbjct: 116 PSGVDASKISMSEEDLLNAKGET 138
BLAST of CK739565 vs. ExPASy Swiss-Prot
Match: PLAS_SILPR (Plastocyanin, chloroplastic OS=Silene pratensis GN=PETE PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.922e-27 Identity = 57/103 (55.34%), Postives = 66/103 (64.08%), Query Frame = 2 Query: 77 FTGLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIP 385 F GLKA +T +T+K A A P++SIKA+LKDVG EVLLG DG LAFVPS S++SGEKI FKNNAGFPHNVVFDEDE+P Sbjct: 15 FAGLKASSTTR---AATVKV-AVATPRMSIKASLKDVGVVVAATAAAGILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVP 113 HSP 2 Score: 38.5058 bits (88), Expect = 2.922e-27 Identity = 17/22 (77.27%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 384 PSGVDVSKISMSTEDLLNGPGE 449 P+GVDV+KISM EDLLN PGE Sbjct: 113 PAGVDVTKISMPEEDLLNAPGE 134
BLAST of CK739565 vs. ExPASy Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 6.248e-27 Identity = 62/105 (59.05%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 77 FTGLKAGATPARVV--GSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIP 385 FTGLKAGA+ + V G++ K +A+ V +L++KA+LKDVG +EVLLGGDDGSLAF+P +FSVS+GEKI FKNNAGFPHNVVFDEDEIP Sbjct: 14 FTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATAVSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIP 118
BLAST of CK739565 vs. ExPASy Swiss-Prot
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 6.908e-26 Identity = 59/103 (57.28%), Postives = 71/103 (68.93%), Query Frame = 2 Query: 77 FTGLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIP 385 FTGLKA + V ++ K SAS +P+LSIKA+LK+VG ++VLLG DDGSLAFVPS FSV +GEKIVFKNNAGFPHNV+FDED +P Sbjct: 14 FTGLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAASAMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVP 116
BLAST of CK739565 vs. ExPASy Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 3.790e-24 Identity = 60/107 (56.07%), Postives = 73/107 (68.22%), Query Frame = 2 Query: 77 FTGLKAGA----TPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIP 385 FTGLKA T A+++ +T +AVP+LS+KA+LK+VG +EVLLGG DGSLAF+P FSV+SGE+IVFKNNAGFPHNVVFDEDEIP Sbjct: 15 FTGLKASGSIKPTTAKIIPTT-----TAVPRLSVKASLKNVGAAVVATAAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIP 116
BLAST of CK739565 vs. ExPASy Swiss-Prot
Match: PLAS_SAMNI (Plastocyanin OS=Sambucus nigra GN=PETE PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.820e-23 Identity = 39/47 (82.98%), Postives = 45/47 (95.74%), Query Frame = 2 Query: 245 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIP 385 +E+LLGG+DGSLAF+PS+FSV SGEKI FKNNAGFPHNVVFDEDE+P Sbjct: 1 VEILLGGEDGSLAFIPSNFSVPSGEKITFKNNAGFPHNVVFDEDEVP 47 HSP 2 Score: 40.0466 bits (92), Expect = 1.820e-23 Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 3 Query: 384 PSGVDVSKISMSTEDLLNGPGET 452 PSGVD +KISMS +DLLN PGET Sbjct: 47 PSGVDSAKISMSEDDLLNAPGET 69
BLAST of CK739565 vs. ExPASy Swiss-Prot
Match: PLAS_RUMOB (Plastocyanin OS=Rumex obtusifolius GN=PETE PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.820e-23 Identity = 38/47 (80.85%), Postives = 45/47 (95.74%), Query Frame = 2 Query: 245 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIP 385 IE+ LGGDDG+LAFVP SF+V++GEKIVFKNNAGFPHN+VFDEDE+P Sbjct: 1 IEIKLGGDDGALAFVPGSFTVAAGEKIVFKNNAGFPHNIVFDEDEVP 47 HSP 2 Score: 41.9726 bits (97), Expect = 1.820e-23 Identity = 19/23 (82.61%), Postives = 20/23 (86.96%), Query Frame = 3 Query: 384 PSGVDVSKISMSTEDLLNGPGET 452 P+GVD SKISMS EDLLN PGET Sbjct: 47 PAGVDASKISMSEEDLLNAPGET 69
BLAST of CK739565 vs. ExPASy Swiss-Prot
Match: PLAS1_ARATH (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana GN=PETE PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.881e-23 Identity = 59/106 (55.66%), Postives = 68/106 (64.15%), Query Frame = 2 Query: 77 FTGLKAGATPARVVGSTMKASASAV---PKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIP 385 FTGLK + ST+ S SA PKL++K++LKD G +EVLLG DDGSLAFVPS F+V+ GEKIVFKNNAGFPHNVVFDEDEIP Sbjct: 14 FTGLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIP 119
BLAST of CK739565 vs. ExPASy Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 2.716e-22 Identity = 54/103 (52.43%), Postives = 68/103 (66.02%), Query Frame = 2 Query: 77 FTGLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIP 385 FTGLKA + ++ +A A PKL++K++LK+ G IEVLLGG DGSLAF+P+ FS++ GEKIVFKNNAG+PHNVVFDEDEIP Sbjct: 14 FTGLKASTIKSSAT-VRIQTAAVASPKLTVKSSLKNFGVAAVAAAASIALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIP 115
BLAST of CK739565 vs. ExPASy Swiss-Prot
Match: PLAS_PEA (Plastocyanin, chloroplastic OS=Pisum sativum GN=PETE PE=4 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.003e-21 Identity = 53/103 (51.46%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 77 FTGLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIP 385 F+GLK A + + S S P+L ++A+LKD G +EVLLG DG LAFVPSS VS+GE IVFKNNAGFPHNVVFDEDEIP Sbjct: 14 FSGLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFGVALVATAASAVLASNALAVEVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIP 116 The following BLAST results are available for this feature:
BLAST of CK739565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739565 ID=CK739565; Name=CK739565; organism=Citrus sinensis; type=EST; length=477bpback to top |