CK739703
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739703 vs. ExPASy Swiss-Prot
Match: PSAF_ARATH (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana GN=PSAF PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.780e-29 Identity = 58/65 (89.23%), Postives = 63/65 (96.92%), Query Frame = 3 Query: 3 FLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKDV 197 FLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASR++FRGF WPVAAYREF+NG+L+ KDV Sbjct: 157 FLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221
BLAST of CK739703 vs. ExPASy Swiss-Prot
Match: PSAF_HORVU (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare GN=PSAF PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 2.436e-25 Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 3 Query: 3 FLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 194 FLYIAGWIGWVGRSYLIA+SGEKKPAM+EIIIDV LA+R++ RGF WPVAAYRE +NG+LVV D Sbjct: 167 FLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDD 230
BLAST of CK739703 vs. ExPASy Swiss-Prot
Match: PSAF_FLATR (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia GN=PSAF PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.155e-25 Identity = 51/61 (83.61%), Postives = 57/61 (93.44%), Query Frame = 3 Query: 3 FLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELV 185 FLYIAGWIGWVGRSYLIAI EKKP KEIIIDVPLA++L+FRGFSWPVAAYRE++NGEL+ Sbjct: 168 FLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLATKLLFRGFSWPVAAYREYLNGELI 228
BLAST of CK739703 vs. ExPASy Swiss-Prot
Match: PSAF_SPIOL (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea GN=PSAF PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.087e-25 Identity = 53/61 (86.89%), Postives = 55/61 (90.16%), Query Frame = 3 Query: 3 FLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELV 185 FLYIAGWIGWVGRSYLIAI EKKP KEIIIDVPLAS L+FRGFSWPVAAYRE +NGELV Sbjct: 167 FLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227
BLAST of CK739703 vs. ExPASy Swiss-Prot
Match: PSAF_SYNP6 (Photosystem I reaction center subunit III OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaF PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.096e-17 Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 3 Query: 3 FLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVK 191 FLYIAGWIGWVGRSYL AI +K A KEI+IDVPLA + GF+WP+AA++EF +G+L+ K Sbjct: 88 FLYIAGWIGWVGRSYLQAIKSDKDAAGKEIVIDVPLAVKFSLTGFAWPLAAFQEFSSGKLLAK 150
BLAST of CK739703 vs. ExPASy Swiss-Prot
Match: PSAF_SYNY3 (Photosystem I reaction center subunit III OS=Synechocystis sp. (strain PCC 6803) GN=psaF PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.869e-17 Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 3 Query: 3 FLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 194 FLYIAGWIGWVGRSYLI I K P M+E++I+VPLA + + GF WP+AA E+ +G+LV+KD Sbjct: 94 FLYIAGWIGWVGRSYLIEIRESKNPEMQEVVINVPLAIKKMLGGFLWPLAAVGEYTSGKLVMKD 157
BLAST of CK739703 vs. ExPASy Swiss-Prot
Match: PSAF_THEEB (Photosystem I reaction center subunit III OS=Thermosynechococcus elongatus (strain BP-1) GN=psaF PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.164e-17 Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 3 FLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 194 FLYIAGWIGWVGR+YLIA+ + KEIIIDVPLA + + GF+WP+AA +E +GEL KD Sbjct: 93 FLYIAGWIGWVGRAYLIAVRNSGEANEKEIIIDVPLAIKCMLTGFAWPLAALKELASGELTAKD 156
BLAST of CK739703 vs. ExPASy Swiss-Prot
Match: PSAF_SYNEN (Photosystem I reaction center subunit III OS=Synechococcus elongatus naegeli GN=psaF PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.164e-17 Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 3 FLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 194 FLYIAGWIGWVGR+YLIA+ + KEIIIDVPLA + + GF+WP+AA +E +GEL KD Sbjct: 93 FLYIAGWIGWVGRAYLIAVRNSGEANEKEIIIDVPLAIKCMLTGFAWPLAALKELASGELTAKD 156
BLAST of CK739703 vs. ExPASy Swiss-Prot
Match: PSAF_PORYE (Photosystem I reaction center subunit III OS=Porphyra yezoensis GN=psaF PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.103e-17 Identity = 35/64 (54.69%), Postives = 50/64 (78.12%), Query Frame = 3 Query: 3 FLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 194 FLYI GWIGWVGR YL++++ KP KEII+DVPLA + + GF+WP+AA++EF +G+L+ + Sbjct: 110 FLYITGWIGWVGRGYLLSVAKTSKPTEKEIILDVPLAIKFMSSGFAWPLAAWQEFSSGQLIASN 173
BLAST of CK739703 vs. ExPASy Swiss-Prot
Match: PSAF_PORPU (Photosystem I reaction center subunit III OS=Porphyra purpurea GN=psaF PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.277e-17 Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 3 Query: 3 FLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELV 185 FLYI GWIGWVGR YL++++ KP KEII+DVPLA + + GF+WP+AA++EF +G+L+ Sbjct: 114 FLYITGWIGWVGRGYLLSVAKTSKPTEKEIILDVPLAVKFMSSGFAWPLAAWQEFSSGQLI 174 The following BLAST results are available for this feature:
BLAST of CK739703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739703 ID=CK739703; Name=CK739703; organism=Citrus sinensis; type=EST; length=351bpback to top |