CK740007
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740007 vs. ExPASy Swiss-Prot
Match: PPOC_TOBAC (Protoporphyrinogen oxidase, chloroplastic OS=Nicotiana tabacum GN=PPXI PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.174e-42 Identity = 83/109 (76.15%), Postives = 95/109 (87.16%), Query Frame = 1 Query: 1 QEKNKAPKQPRDPRLPKPKGQTVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDNGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGALSQFYY 327 +E++ PK PRDPRLPKPKGQTVGSFRKGL MLP+AIS RLGSK+KLSWKLS + K + G Y LTYETPEG+VSL+SRS+VMTVPSYVAS++LRPLSV AA ALS FYY Sbjct: 265 KERSSTPKAPRDPRLPKPKGQTVGSFRKGLRMLPDAISARLGSKLKLSWKLSSITKSEKGGYHLTYETPEGVVSLQSRSIVMTVPSYVASNILRPLSVAAADALSNFYY 373
BLAST of CK740007 vs. ExPASy Swiss-Prot
Match: PPOC_ARATH (Protoporphyrinogen oxidase, chloroplastic OS=Arabidopsis thaliana GN=PPOX PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.839e-42 Identity = 84/109 (77.06%), Postives = 96/109 (88.07%), Query Frame = 1 Query: 1 QEKNKAPKQPRDPRLPKPKGQTVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDNGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGALSQFYY 327 QE+ APK RDPRLPKP+GQTVGSFRKGL MLPEAIS RLGSKVKLSWKLSG+ KL++G Y+LTYETP+GLVS++S+SVVMTVPS+VAS LLRPLS AA ALS+ YY Sbjct: 254 QERKNAPKAERDPRLPKPQGQTVGSFRKGLRMLPEAISARLGSKVKLSWKLSGITKLESGGYNLTYETPDGLVSVQSKSVVMTVPSHVASGLLRPLSESAANALSKLYY 362
BLAST of CK740007 vs. ExPASy Swiss-Prot
Match: PPOC_ORYSJ (Protoporphyrinogen oxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=PPOX1 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.035e-40 Identity = 79/109 (72.48%), Postives = 93/109 (85.32%), Query Frame = 1 Query: 1 QEKNKAPKQPRDPRLPKPKGQTVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDNGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGALSQFYY 327 QE+ K PK PRDPRLP PKGQTV SFRKGLTMLP+AI+ RLGSKVKLSWKL+ + K DN Y+L YETPEG+VS+++++VVMT+PSYVAS +LRPLS DAA ALS FYY Sbjct: 253 QERGKNPKPPRDPRLPTPKGQTVASFRKGLTMLPDAITSRLGSKVKLSWKLTSITKSDNKGYALVYETPEGVVSVQAKTVVMTIPSYVASDILRPLSSDAADALSIFYY 361 The following BLAST results are available for this feature:
BLAST of CK740007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740007 ID=CK740007; Name=CK740007; organism=Citrus sinensis; type=EST; length=329bpback to top |