CK740113

Overview
NameCK740113
Unique NameCK740113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXD1_ARATH (Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.167e-59
Identity = 116/177 (65.54%), Postives = 143/177 (80.79%), Query Frame = 2
Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQKLRFSMRRFLIR----LTMMRISSGSWLQEQAQINATLNQYKNVYGE 520
            R+A QRK+IRQ Y +TYGEDLLK+LDKEL+NDFER ++LWTL+P ERDA LANEATKRWTSSNQVLME+ACTR+S QLL ARQAYHAR+KKSLEEDV +HT GDFRKLL+ LVT+YRYEGDEVN+TLA Q+ +    +   +      ++RI S    + +AQINAT N+Y++ +GE
Sbjct:   41 RSAEQRKVIRQAYHETYGEDLLKTLDKELSNDFERAILLWTLEPGERDALLANEATKRWTSSNQVLMEVACTRTSTQLLHARQAYHARYKKSLEEDVAHHTTGDFRKLLVSLVTSYRYEGDEVNMTLAKQEAKLVHEKIKDKHYNDEDVIRILS---TRSKAQINATFNRYQDDHGE 214          
BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXD7_ARATH (Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 2.017e-55
Identity = 100/181 (55.25%), Postives = 126/181 (69.61%), Query Frame = 2
Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQKLRFSMRRF---------LIRLTMMRISSGSWLQEQAQINATLNQYKNVYG 517
            RNA QR  IR  YA  Y +DLLK LD+EL+ DFER VMLWT +PAERDA+LA E+TK +T +N VL+EIACTRS+ +L  A+QAY AR+K SLEEDV YHT+GD RKLL+PLV+ +RY+GDEVN+TLA  + +    +          LIR+   R         +AQI+ATLN YKN +G
Sbjct:   41 RNATQRSFIRAVYAANYNKDLLKELDRELSGDFERAVMLWTFEPAERDAYLAKESTKMFTKNNWVLVEIACTRSALELFNAKQAYQARYKTSLEEDVAYHTSGDIRKLLVPLVSTFRYDGDEVNMTLARSEAKILHEKIKEKAYADDDLIRILTTR--------SKAQISATLNHYKNNFG 213          

HSP 2 Score: 43.1282 bits (100), Expect = 2.017e-55
Identity = 17/38 (44.74%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  516 GNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKIL 629
            G  + + L+ D ++EY+ LL+A ++CL  PE YFEK+L
Sbjct:  213 GTSMSKYLKEDSENEYIQLLKAVIKCLTYPEKYFEKVL 250          
BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXD2_ARATH (Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 5.827e-55
Identity = 100/176 (56.82%), Postives = 129/176 (73.30%), Query Frame = 2
Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQKLRFSMRRFLIRL----TMMRISSGSWLQEQAQINATLNQYKNVYG 517
            RNAAQR LIR  YA TY EDLLK+LDKEL++DFER VMLWTLDP ERDA+LA E+TK +T +N VL+EIACTR + +L++ +QAY AR+KKS+EEDV  HT+GD RKLLLPLV+ +RYEGD+VN+ LA  + +    +   +       +RI +    + +AQ+ ATLN Y N YG
Sbjct:   41 RNAAQRSLIRSVYAATYNEDLLKALDKELSSDFERAVMLWTLDPPERDAYLAKESTKMFTKNNWVLVEIACTRPALELIKVKQAYQARYKKSIEEDVAQHTSGDLRKLLLPLVSTFRYEGDDVNMMLARSEAKILHEKVSEKSYSDDDFIRILT---TRSKAQLGATLNHYNNEYG 213          

HSP 2 Score: 39.6614 bits (91), Expect = 5.827e-55
Identity = 18/39 (46.15%), Postives = 28/39 (71.79%), Query Frame = 3
Query:  516 GNDIDQDLEADPKD-EYLDLLRATVQCLVRPEHYFEKIL 629
            GN I+++L+ +  D +Y+ LLRA + CL  PE +FEK+L
Sbjct:  213 GNAINKNLKEESDDNDYMKLLRAVITCLTYPEKHFEKVL 251          
BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXD6_ARATH (Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.406e-52
Identity = 95/178 (53.37%), Postives = 126/178 (70.79%), Query Frame = 2
Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEG--DEVNITLANQKLRFSMRRFLIRL----TMMRISSGSWLQEQAQINATLNQYKNVYG 517
            RNA QR  IR  YA  Y +DLLK LD EL+ DFERVVMLWTLDP ERDA+LANE+TK +T +  VL+EIACTR S +  + +QAYH R+K SLEEDV YHT+G+ RKLL+PLV+ +RY+G  DEVN+ LA  + +   ++   +      ++RI +    + +AQINATLN +K+ +G
Sbjct:   41 RNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKKITEKAYTDEDLIRILT---TRSKAQINATLNHFKDKFG 215          

HSP 2 Score: 43.5134 bits (101), Expect = 4.406e-52
Identity = 17/38 (44.74%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  516 GNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKIL 629
            G+ I++ L+ D  D+Y+ LL+  ++CL  PE YFEK+L
Sbjct:  215 GSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVL 252          
BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANX4_FRAAN (Annexin-like protein RJ4 OS=Fragaria ananassa PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.040e-36
Identity = 84/176 (47.73%), Postives = 114/176 (64.77%), Query Frame = 2
Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQK---LRFSMR-RFLIRLTMMRISSGSWLQEQAQINATLNQYKNVYG 517
            RNA QRK IR  Y   Y EDLLK L+ EL+ DFE+ V  WTLDPA+RDA LAN A K+ T    V++EI+C  S ++LL  R+AY  R+K S+EED+  HT GD RKLL+ LVTAYRY+G E+N  LAN +   L  +++ +      ++RI S    + + Q+ AT N+Y++  G
Sbjct:   40 RNAGQRKEIRAAYEQLYQEDLLKPLESELSGDFEKAVYRWTLDPADRDAVLANVAIKKSTDVYNVIIEISCIHSPEELLAVRRAYQLRYKHSVEEDLAAHTTGDIRKLLVALVTAYRYDGHEINAKLANSEADILHDAIKDKAFNHEEIIRILS---TRSKTQLMATFNKYRDDQG 212          
BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXD4_ARATH (Annexin D4 OS=Arabidopsis thaliana GN=ANN4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.042e-20
Identity = 52/128 (40.62%), Postives = 81/128 (63.28%), Query Frame = 2
Query:   17 RKLIRQTYADTYGEDLLKSLDK-------ELTNDFER---VVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEV 370
            RKL R+     + ED  ++ +K        L  +F R    V++W + P ERDA L  +A K+   +  +++E++CTRS++ LL AR+AYH+ F +S+EED+  H +G  RKLL+ LV+AYRYEG++V
Sbjct:   39 RKLFRKASKSFFVEDEERAFEKCHDHFVRHLKLEFSRFNTAVVMWAMHPWERDARLVKKALKKGEEAYNLIVEVSCTRSAEDLLGARKAYHSLFDQSMEEDIASHVHGPQRKLLVGLVSAYRYEGNKV 166          
BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXD3_ARATH (Annexin D3 OS=Arabidopsis thaliana GN=ANN3 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.181e-19
Identity = 51/133 (38.35%), Postives = 79/133 (59.40%), Query Frame = 2
Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLAN-----EATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLA 385
            R+ +QR+ IR+++ + YG+DL+  L  EL+ DF + V+ WT DPAERDA L N     E  K+   + +V++EI+CT S   L+  R+AY + F  SLEE +         KLL+ L + +RY+ D  +  +A
Sbjct:   41 RDQSQRRKIRESFREIYGKDLIDVLSSELSGDFMKAVVSWTYDPAERDARLVNKILNKEKKKKSLENLKVIVEISCTTSPNHLIAVRKAYCSLFDSSLEEHIASSLPFPLAKLLVTLASTFRYDKDRTDAEVA 173          
BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANX13_HUMAN (Annexin A13 OS=Homo sapiens GN=ANXA13 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 1.403e-18
Identity = 48/130 (36.92%), Postives = 80/130 (61.54%), Query Frame = 2
Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQ 391
            R + +R+ I+Q Y  TYG++L + L  EL+ +FE+  +     P+E  A    +A K   +   VL+E+ CTR++K+++  ++AY   F +SLE DV   T+G+ +K+L+ L+ A R EGD+V+  LA Q
Sbjct:   44 RTSDERQQIKQKYKATYGKELEEVLKSELSGNFEKTALALLDRPSEYAARQLQKAMKGLGTDESVLIEVLCTRTNKEIIAIKEAYQRLFDRSLESDVKGDTSGNLKKILVSLLQANRNEGDDVDKDLAGQ 173          

HSP 2 Score: 21.557 bits (44), Expect = 1.403e-18
Identity = 14/46 (30.43%), Postives = 23/46 (50.00%), Query Frame = 3
Query:  504 RMYMGNDIDQDLE----ADPKDEYLDLLRATVQCLVRPEHYFEKIL 629
            ++ +G DI++ +E     D +  YL L+R    C    E YF + L
Sbjct:  213 QILIGKDIEEAIEEETSGDLQKAYLTLVRCAQDC----EDYFAERL 254          
BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXD5_ARATH (Annexin D5 OS=Arabidopsis thaliana GN=ANN5 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.961e-18
Identity = 45/124 (36.29%), Postives = 69/124 (55.65%), Query Frame = 2
Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVN 373
            RNA QR LI Q Y   + +DL K L  EL    ++ V+LW  +  ERDA +   + +   + ++ + EI CTRS  QL + +Q Y   F   LEED+    +G+ +++LL  +   RYEG E++
Sbjct:   41 RNATQRALIEQEYETKFSDDLRKRLHSELHGHLKKAVLLWMPEAVERDASILKRSLRGAVTDHKAIAEIICTRSGSQLRQIKQVYSNTFGVKLEEDIESEASGNHKRVLLAYLNTTRYEGPEID 164          
BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANX13_CANFA (Annexin A13 OS=Canis familiaris GN=ANXA13 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.480e-18
Identity = 48/130 (36.92%), Postives = 79/130 (60.77%), Query Frame = 2
Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQ 391
            R + +R+ I+Q Y  TYG+DL +    +L+ +FE+  +     P+E DA    +A K   +   VL+EI CTR++K+++  ++AY   F +SLE DV   T+G+ + +L+ L+ A R EGD+V+  LA Q
Sbjct:   44 RTSDERQQIKQKYKATYGKDLEEVFKSDLSGNFEKTALALLDRPSEYDARQLQKAMKGLGTDEAVLIEILCTRTNKEIMAIKEAYQRLFDRSLESDVKADTSGNLKAILVSLLQANRDEGDDVDKDLAGQ 173          
The following BLAST results are available for this feature:
BLAST of CK740113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
ANXD1_ARATH1.167e-5965.54Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV... [more]
ANXD7_ARATH2.017e-5555.25Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 ... [more]
ANXD2_ARATH5.827e-5556.82Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV... [more]
ANXD6_ARATH4.406e-5253.37Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV... [more]
ANX4_FRAAN4.040e-3647.73Annexin-like protein RJ4 OS=Fragaria ananassa PE=2... [more]
ANXD4_ARATH9.042e-2040.63Annexin D4 OS=Arabidopsis thaliana GN=ANN4 PE=2 SV... [more]
ANXD3_ARATH1.181e-1938.35Annexin D3 OS=Arabidopsis thaliana GN=ANN3 PE=2 SV... [more]
ANX13_HUMAN1.403e-1836.92Annexin A13 OS=Homo sapiens GN=ANXA13 PE=1 SV=3[more]
ANXD5_ARATH4.961e-1836.29Annexin D5 OS=Arabidopsis thaliana GN=ANN5 PE=2 SV... [more]
ANX13_CANFA6.480e-1836.92Annexin A13 OS=Canis familiaris GN=ANXA13 PE=1 SV=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6607 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740113 ID=CK740113; Name=CK740113; organism=Citrus sinensis; type=EST; length=667bp
CAGAAATGCTGCTCAACGCAAGTTGATTCGACAAACATATGCTGATACTT
ACGGCGAAGACCTCCTCAAGTCGCTCGACAAGGAACTCACTAATGACTTT
GAGAGGGTGGTGATGCTCTGGACTCTTGATCCTGCTGAACGTGATGCGTT
TTTGGCTAATGAAGCCACTAAGAGGTGGACTTCTAGCAACCAGGTTCTTA
TGGAAATTGCATGCACCAGGTCTTCGAAGCAATTGCTCGAAGCAAGGCAG
GCTTATCATGCTCGTTTTAAGAAGTCCCTTGAAGAGGATGTTGGTTATCA
CACCAATGGGGACTTCCGCAAGCTTTTGCTACCCCTTGTGACTGCCTACC
GATATGAGGGTGATGAGGTGAACATTACACTTGCAAATCAGAAGCTAAGA
TTCTCCATGAGAAGATTTCTAATAAGGCTTACAATGATGAGGATCTCATC
AGGATCTTGGCTACAGGAGCAAGCACAGATCAATGCGACTCTGAATCAAT
ACAAGAATGTATATGGGGAATGATATTGATCAGGACTTAGAGGCTGACCC
TAAAGATGAGTACCTCGACCTACTGAGGGCCACAGTTCAGTGCTTAGTCC
GCCCTGAACATTATTTTGAGAAGATACTTCTCTGGCATTAACAAACAGGG
AACAGATGAAGGGCTCT
back to top