CK934063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934063 vs. ExPASy Swiss-Prot
Match: ATL1Q_ARATH (RING-H2 finger protein ATL1Q OS=Arabidopsis thaliana GN=ATL1Q PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.964e-45 Identity = 84/144 (58.33%), Postives = 110/144 (76.39%), Query Frame = 1 Query: 310 ELLEASRAYWCLERTGSRGSSSMADFVEDLLRGRFIEEQFTPAILGAYHWQVRIASMSYDVNDTDCRAL-SRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 738 E+LEASRAYW LE +GSRG SSMADFVE L RGR ++EQ ++ ++HWQ+RI+ +SY+ + L +RGL+G+SL+KLPC+++ E+ Q + C+ICLQDI GE+ RSLP C HTFHL CVDKWLIRHGSCP+CR+ V Sbjct: 78 EVLEASRAYWYLELSGSRGPSSMADFVEQLFRGRLVDEQLMSTMINSHHWQLRISDVSYEEREDVYGELEARGLSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICRQAV 221
BLAST of CK934063 vs. ExPASy Swiss-Prot
Match: ATL5P_ARATH (RING-H2 finger protein ATL5P OS=Arabidopsis thaliana GN=ATL5P PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.113e-27 Identity = 64/142 (45.07%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 310 ELLEASRAYWCLERTGSRGSSSMADFVEDLLRGRFIEEQFTPAILGAYHWQV-RIASMSYDVNDTDCRALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRR 732 E+ E+S W + +G + D + LL GR + E+ PA+L A Q+ + S D D A+S+GLTG+SL ++P I D S CS+CLQD VGE RSLPHCHH FHL C+DKWL RH SCP+CRR Sbjct: 80 EVFESSLLLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRITDTSPEIVS--CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRR 219
BLAST of CK934063 vs. ExPASy Swiss-Prot
Match: ATL2B_ARATH (RING-H2 finger protein ATL2B OS=Arabidopsis thaliana GN=ATL2B PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.323e-25 Identity = 60/148 (40.54%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 310 ELLEASRAYWCLERTGSRGSSSMADFVEDLLRGRFIEEQFTPAILGAYHWQVRIASMSYDVNDT--DCRALSRGLTGESLKKLPCHVILDEIKPTQSS---CCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 738 E+ E+S W + +G + D + LL GR + E+ PA+L A Q+ ++D + + D S+GLTG+ ++K+P I S CS+CLQD +GE RSLPHCHH FHL C+D WL+RHGSCP+CRRD+ Sbjct: 95 EVFESSLDLWKSDESGFGCFLYLIDVIVSLLSGRLVRERIGPAMLSAVQSQMGAVDTAFDDHTSLFDTGG-SKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241
BLAST of CK934063 vs. ExPASy Swiss-Prot
Match: ATL4M_ARATH (RING-H2 finger protein ATL4M OS=Arabidopsis thaliana GN=ATL4M PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.706e-23 Identity = 58/150 (38.67%), Postives = 82/150 (54.67%), Query Frame = 1 Query: 310 ELLEASRAYWCLERTGSRGSSSMADFVEDLLRGRFIEEQFTPAILGAYHWQVRIASMSYD----VNDTDCRALSRGLTGESLKKLPCHVILDEIKPTQSS---CCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 738 E+ E+S W + + D + L+ GR + E+ PA+L A Q+ +++ + DT S+GLTG+ + K+P I + S CS+CLQD +GE RSLPHCHH FHL C+D WL RHGSCP+CRRD+ Sbjct: 90 EVFESSLVLWKSNESRFGCLLYLIDVIVSLISGRLVRERIGPAMLSAVQSQMGAVDSTFEELSSIFDTGG---SKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236
BLAST of CK934063 vs. ExPASy Swiss-Prot
Match: ATL5B_ARATH (RING-H2 finger protein ATL5B OS=Arabidopsis thaliana GN=ATL5B PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12 Identity = 33/84 (39.29%), Postives = 49/84 (58.33%), Query Frame = 1 Query: 487 DVNDTDCRALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 738 D DT+ +++G+ +LK +P E+K + C ICL D + GE R LP C+H FH+ C+D WL+ H SCP CR+ + Sbjct: 77 DPVDTNAN-VAKGIKKRALKVIPVDSYSPELKMKATECL-ICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL 158
BLAST of CK934063 vs. ExPASy Swiss-Prot
Match: ATL1I_ARATH (RING-H2 finger protein ATL1I OS=Arabidopsis thaliana GN=ATL1I PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12 Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 499 TDCRALSRGLTGESLKKLPCHVILDEIK-PTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCR 729 T C + ++G+ ++L+ P E+ P C ICL D + GE R LP CHH FH+ C+DKWL +H +CP CR Sbjct: 101 TPCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCR 178
BLAST of CK934063 vs. ExPASy Swiss-Prot
Match: ATL2I_ARATH (RING-H2 finger protein ATL2I OS=Arabidopsis thaliana GN=ATL2I PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.133e-11 Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 1 Query: 523 GLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCR 729 GL ++++ P + + PT +SCC+ICL D L R LP C+H FHL C+D WL + +CPVCR Sbjct: 121 GLDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCR 189
BLAST of CK934063 vs. ExPASy Swiss-Prot
Match: ATL1P_ARATH (RING-H2 finger protein ATL1P OS=Arabidopsis thaliana GN=ATL1P PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.397e-11 Identity = 32/77 (41.56%), Postives = 42/77 (54.55%), Query Frame = 1 Query: 523 GLTGESLKKLPCHVILDEIKPTQSSC-----CSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 738 GLT L LP Q SC CSICL +++ G+ AR LP C+H+FH+ C+D W H +CP+CR V Sbjct: 102 GLTSFELSSLPIVFF------RQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172
BLAST of CK934063 vs. ExPASy Swiss-Prot
Match: ATL3F_ARATH (RING-H2 finger protein ATL3F OS=Arabidopsis thaliana GN=ATL3F PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 31/80 (38.75%), Postives = 42/80 (52.50%), Query Frame = 1 Query: 517 SRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV*AYVGL 756 SRGL +K LP DE C ++CL + E R LP+C HTFH+ C+D W H +CP+CR V + G+ Sbjct: 92 SRGLDPNVIKSLPVFTFSDETHKDPIEC-AVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGI 170
BLAST of CK934063 vs. ExPASy Swiss-Prot
Match: ATL3C_ARATH (RING-H2 finger protein ATL3C OS=Arabidopsis thaliana GN=ATL3C PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 30/76 (39.47%), Postives = 45/76 (59.21%), Query Frame = 1 Query: 511 ALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 738 A + GL ++LK++P + I +++ C ICL D GE R LP C+H FH+ C+D WL+ SCP CR+ + Sbjct: 84 AAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSL 159 The following BLAST results are available for this feature:
BLAST of CK934063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934063 ID=CK934063; Name=CK934063; organism=Citrus sinensis; type=EST; length=869bpback to top |