CK934151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 5.120e-87 Identity = 152/173 (87.86%), Postives = 164/173 (94.80%), Query Frame = 3 Query: 3 YGFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIDYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIRHARL 521 YGFDPFGLGKPAEYLQ+D DSLDQNLAKN AGD+IGTR EA+D +STP QPY+EVFG+QRFRECELIHGRWAMLATLGAL+VEWLTG+TWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVI YIEFQRN+ELD EKRLYPGGKFFDPLGLAADPEK A LQLAEI+HARL Sbjct: 76 YGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARL 248
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 2.151e-85 Identity = 150/173 (86.71%), Postives = 162/173 (93.64%), Query Frame = 3 Query: 3 YGFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIDYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIRHARL 521 YGFDPFGLGKPAEYLQ+D DSLDQNLAKN G++IGTR EA D +STP QPY+EVFGLQRFRECELIHGRWAMLATLGA+TVEWLTG+TWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVI YIEFQRN+ELD EKRLYPGGKFFDPLGLA+DP KKA LQLAEI+HARL Sbjct: 73 YGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARL 245
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 4.642e-80 Identity = 143/172 (83.14%), Postives = 157/172 (91.28%), Query Frame = 3 Query: 6 GFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIDYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIRHARL 521 GFDPFGLGKPAEYLQYD+D LDQNLAKN AGDIIG E+S+++ TP QPYTEVFG+QRFRECELIHGRWAML TLGA+ VE LTGI WQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLV+ YIEFQRNSELDPEKR+YPGG +FDPLGLAADPEK TL+LAEI+H+RL Sbjct: 78 GFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKLAEIKHSRL 248
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 190.66 bits (483), Expect = 3.587e-48 Identity = 103/175 (58.86%), Postives = 124/175 (70.86%), Query Frame = 3 Query: 6 GFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTP--LQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIDYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKA-TLQLAEIRHARL 521 GFDP GL KP+E++ D DQN AKN G + D S+ L PY+EVFGL RFRECELIHGRWAMLA LGAL E TG++W +AGKVEL +G+SY G LPFSIT LIWIEV+++ EF RNSE +PEKR YPGG FDPL LA++ E++A L+ AEI+HARL Sbjct: 72 GFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEAGKVEL-DGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSETNPEKRCYPGG-VFDPLKLASEDEERAFRLKTAEIKHARL 244
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.203e-19 Identity = 54/119 (45.38%), Postives = 77/119 (64.71%), Query Frame = 3 Query: 174 LQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEG--SSYLGQPLPF-SITTLIWIEVLVIDYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIRHARL 521 L+R++E ELIH RWAMLA G + E L W A + + G ++YLGQP+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG FDPLG + DP K L++ EI++ RL Sbjct: 81 LERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGA-FDPLGYSKDPAKFEELKVKEIKNGRL 198
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.268e-18 Identity = 58/134 (43.28%), Postives = 77/134 (57.46%), Query Frame = 3 Query: 129 DMQSTPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGK-VELVEG-SSYLGQPLPF-SITTLIWIEVLVIDYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIRHARL 521 D PL T +RF+E E+ H RWAML G L E L W A + L +G ++YLG P+P+ ++ T++ IE L I + E QR E DPEK+ YPGG FDPLG + DP K L+L EI++ RL Sbjct: 65 DFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGA-FDPLGFSKDPAKFEELKLKEIKNGRL 197
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.797e-15 Identity = 56/148 (37.84%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 174 LQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIDYIEFQRNSE-LDPEKRL----------------------YPGGKFFDPLGLAA---------DPEKKATLQLAEIRHARL 521 L+ +RE ELIHGRWAMLA LG + TGI W +AG + G PFS TL+ ++L++ ++E +R + DP+ + YPGGKFFDPL LA D +K L+LAEI+HARL Sbjct: 98 LKWYREAELIHGRWAMLAVLGIFVGQAWTGIPWFEAG--------ADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARL 237
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.521e-14 Identity = 62/205 (30.24%), Postives = 85/205 (41.46%), Query Frame = 3 Query: 3 YGFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIDYIEFQRNSE-LDPEKRL----------------------YPGGKFFDPLGLAA---------DPEKKATLQLAEIRHARL 521 YGFDP GLGK +L++ +RE ELIHGRWAM A LG + +GI W +AG + G PFS TL+ +++++ ++E +R + DP+ + YPGGKFFDPL LA D EK L++AEI+HARL Sbjct: 79 YGFDPLGLGKDPAFLKW-------------------------------------------YREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAG--------ADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARL 232
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.197e-13 Identity = 59/184 (32.07%), Postives = 85/184 (46.20%), Query Frame = 3 Query: 3 YGFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGI--------TWQDAGKVELVEGSS--YLGQPLPFSITTLIWIEVLVIDYIEFQR-NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIRHARL 521 YG+DPFGLGK E N AK ++ ELIH RWAML G + E L W G + L++G++ Y G+ +P ++ + EV+++ E+ R + LD E +L+PGG F DPLGLA DPE+ A L++ EI++ RL Sbjct: 93 YGYDPFGLGKKPE-----------NFAK--------------------------------YQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPF-DPLGLAKDPEQGALLKVKEIKNGRL 231
BLAST of CK934151 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13 Identity = 52/148 (35.14%), Postives = 73/148 (49.32%), Query Frame = 3 Query: 174 LQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIDYIEFQR--------NSELD---------------PEKRLYPGGKFFDPLGLAA---------DPEKKATLQLAEIRHARL 521 L+ +RE ELIHGRWAM A LG + +GI W +AG G PFS +L+ ++L++ ++E +R + +D ++ YPGGKFFDPL LA D EK L+LAEI+H+RL Sbjct: 93 LKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADP--------GAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRL 232 The following BLAST results are available for this feature:
BLAST of CK934151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934151 ID=CK934151; Name=CK934151; organism=Citrus sinensis; type=EST; length=522bpback to top |