CK934181
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934181 vs. ExPASy Swiss-Prot
Match: C3H66_ARATH (Zinc finger CCCH domain-containing protein 66 OS=Arabidopsis thaliana GN=At5g58620 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.896e-44 Identity = 92/181 (50.83%), Postives = 121/181 (66.85%), Query Frame = 3 Query: 258 KREIEEKGFD-VDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGGVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVGLIPVAMKSPLHSRKRAIELLLKGDHTI------FEEEELVNIPVPQLSKDGTEKKEYPIDXSLPDINNGVYGT 779 K +EE+G + +D WYGRR+GSKKMGFEERTP+MIAA+FG V+ Y+I TG V+VNR+CGSDG TALHCAV+G + +S E+V LLL SA+ + D YGNKP +I + +R + +E LLKG+ + E E V + V G+E+KEYP+D +LPDI NGVYGT Sbjct: 27 KSLVEEEGLESIDGSGLWYGRRLGSKKMGFEERTPLMIAALFGSKEVVDYIISTGLVDVNRSCGSDGATALHCAVSGLSANSLEIVTLLLKGSANPDSCDAYGNKPGDVIFPCLSPVFSARMKVLERLLKGNDDLNEVNGQEESEPEVEVEVEVSPPRGSERKEYPVDPTLPDIKNGVYGT 207
BLAST of CK934181 vs. ExPASy Swiss-Prot
Match: C3H29_ARATH (Zinc finger CCCH domain-containing protein 29 OS=Arabidopsis thaliana GN=At2g40140 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.699e-42 Identity = 92/176 (52.27%), Postives = 119/176 (67.61%), Query Frame = 3 Query: 258 KREIEEK-GFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGGVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVGLIPVAMKSPLHSRKRAIELLLKGDH-TIFEEEELVNIPVPQLSKDGTEKKEYPIDXSLPDINNGVYGT 779 KREIEE ++DE FWY RR+GSKKMGFEERTP+M+AAM+G + VL Y+I TG+ +VNR C + TALHCAV+G + S E++K+LL ASA NCVD GNKPV L+ + + ++A+E+LL G H ++ EEEE +L T +YP D SLPDIN GVYGT Sbjct: 46 KREIEENPSVEIDESGFWYCRRVGSKKMGFEERTPLMVAAMYGSMEVLNYIIATGRSDVNRVCSDEKVTALHCAVSGCSVSIVEIIKILLDASASPNCVDANGNKPVDLLAKDSRFVPNQSRKAVEVLLTGIHGSVMEEEE------EELKSVVT---KYPADASLPDINEGVYGT 212
BLAST of CK934181 vs. ExPASy Swiss-Prot
Match: C3H47_ARATH (Zinc finger CCCH domain-containing protein 47 OS=Arabidopsis thaliana GN=At3g55980 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.438e-41 Identity = 87/174 (50.00%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 258 KREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGGVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVGLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSKDGTEKKEYPIDXSLPDINNGVYGT 779 KRE+EEKG D+DE WY RR+GSKKMG EERTP+M+AAM+G + VL +++ TGK +VNRACG + T LHCAVAG + + EV+ +LL ASA VN VD GN+P+ + + R++A+ELLL+G +E V + +SK YP D SLPDIN GVYG+ Sbjct: 43 KREVEEKGLDLDESGLWYCRRVGSKKMGLEERTPLMVAAMYGSIKVLTFIVSTGKSDVNRACGEERVTPLHCAVAGCSVNMIEVINVLLDASALVNSVDANGNQPLDVFVRVSRFVASPRRKAVELLLRGGGVGGLIDEAVEEEIKIVSK-------YPADASLPDINEGVYGS 209
BLAST of CK934181 vs. ExPASy Swiss-Prot
Match: C3H30_ARATH (Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana GN=At2g41900 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 6.266e-29 Identity = 78/202 (38.61%), Postives = 106/202 (52.48%), Query Frame = 3 Query: 255 LKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGGVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVGLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEEL---VNIP------------------------VPQLSKDGTEKKEYPIDXSLPDINNGVYGT 779 ++ IE VDE WYGR+ GSK M + RTP+M+AA +G + V+K ++ +VNRACG+D TALHCA +GGA ++ +VVKLLL+A AD+N +D G + +I V K L K ++ LL D + E L N+P P K KKEYP+D SLPDI N +Y T Sbjct: 60 VRLSIERDPSCVDEAGLWYGRQKGSKAMVNDYRTPLMVAATYGSIDVIKLIVSLTDADVNRACGNDQTTALHCAASGGAVNAIQVVKLLLAAGADLNLLDAEGQRAGDVIVVPPK--LEGVKLMLQELLSADGSSTAERNLRVVTNVPNRSSSPCHSPTGENGGSGSGSPLGSPFKLKSTEFKKEYPVDPSLPDIKNSIYAT 259
BLAST of CK934181 vs. ExPASy Swiss-Prot
Match: C3H56_ARATH (Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis thaliana GN=At5g12850 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.229e-26 Identity = 68/194 (35.05%), Postives = 106/194 (54.64%), Query Frame = 3 Query: 288 VDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGGVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVGLIPVAMKSPLHSRKRAIELLLKGDHTIFEE---------------------------EELVNIPVPQLSKDGT---EKKEYPIDXSLPDINNGVYGT 779 +++ WY R+ ++M E+RTP+M+A+++G + V+K+++ + +N +CG D TALHCA +G + +S +VVKLLLS AD N D +GN+PV ++ V+ +P + +E +LK D I E+ + V+ P D T EKKEYPID SLPDI +G+Y T Sbjct: 64 INQMGLWYRRQRFVRRMVLEQRTPLMVASLYGSLDVVKFILSFPEAELNLSCGPDKSTALHCAASGASVNSLDVVKLLLSVGADPNIPDAHGNRPVDVLVVSPHAP--GLRTILEEILKKDEIISEDLHASSSSLGSSFRSLSSSPDNGSSLLSLDSVSSPTKPHGTDVTFASEKKEYPIDPSLPDIKSGIYST 255
BLAST of CK934181 vs. ExPASy Swiss-Prot
Match: C3H24_ORYSJ (Zinc finger CCCH domain-containing protein 24 OS=Oryza sativa subsp. japonica GN=Os03g0698800 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.464e-26 Identity = 74/192 (38.54%), Postives = 99/192 (51.56%), Query Frame = 3 Query: 291 DEPSFWYGRRIGSKKMGFEERTPIMIAAMFGGVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVGLIPVAMKSPLHSRKRAIELLL---KGDHTIF-------------------EEEELVNIPVPQLSKDG-------TEKKEYPIDXSLPDINNGVYGT 779 DE WYGRR E RTP+M+AA +G +AVL+ ++ V+VNR CGSDG TALHCA +GG+ S E VKLLL+A AD + D G +P +I V K + K A++ LL K H + E+ + V +K +EKKEYP+D SLPDI N +Y + Sbjct: 95 DEAGLWYGRR-----KVLEHRTPLMVAATYGSLAVLRLLLSLPSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATDASGYRPADVISVPPK--MFDAKIALQDLLGCPKAGHGVLRVVTRAANSMLSPVSSPTAEDARSPSAAVMMTTKFADLPRVVTSEKKEYPVDPSLPDIKNSIYAS 279 HSP 2 Score: 21.1718 bits (43), Expect = 7.464e-26 Identity = 10/19 (52.63%), Postives = 12/19 (63.16%), Query Frame = 1 Query: 220 LLELSASDDISALREK*KR 276 LLEL+A DD LR +R Sbjct: 70 LLELAADDDAEGLRRALER 88
BLAST of CK934181 vs. ExPASy Swiss-Prot
Match: C3H33_ORYSJ (Zinc finger CCCH domain-containing protein 33 OS=Oryza sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.195e-22 Identity = 59/176 (33.52%), Postives = 88/176 (50.00%), Query Frame = 3 Query: 255 LKREIEEKGFDVDEPSFWYGRRI-GSKKMGFEERTPIMIAAMFGGVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVGLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSKDGTEKKEYPIDXSLPDINNGVYGT 779 ++R +EE+ + WYG G ++G E RT M+AA++G VL YV+ RA +DG T LH A AGGA ++ +LLL+A A V+ + G + L+P A + ++AI LLLK + P KKEYP D +LPD+ +G++ T Sbjct: 40 VRRVVEEEKVSLGVAGLWYGPSASGVARLGMERRTAAMVAALYGSTGVLGYVVAAAPAEAARASETDGATPLHMAAAGGAANAVAATRLLLAAGASVDALSASGLRAGDLLPRAT-----AAEKAIRLLLKSPAVSPSSSPKKSASPPSPPPPQEAKKEYPPDLTLPDLKSGLFST 210 HSP 2 Score: 28.8758 bits (63), Expect = 1.195e-22 Identity = 13/29 (44.83%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 175 LPKLKDGALYNKSSILLELSASDDISALR 261 LP+ + A +S+LLEL+A+DD++A+R Sbjct: 13 LPQQQKEATVMAASLLLELAAADDVAAVR 41
BLAST of CK934181 vs. ExPASy Swiss-Prot
Match: C3H50_ORYSJ (Zinc finger CCCH domain-containing protein 50 OS=Oryza sativa subsp. japonica GN=Os07g0568300 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.378e-19 Identity = 66/192 (34.38%), Postives = 90/192 (46.88%), Query Frame = 3 Query: 270 EEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGGVAVLKYVIETGK-VNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVGLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVN-IPVPQLSKDGTE--------------------KKEYPIDXSLPDINNGVYGT 779 EE D WYGR +E RTP+M+AA +G V+ ++ G V+VNR G+DG TALHCA +GG+ ++ VVKLLL+A AD D G P +I SP +E+LL + + + P LS E KKEYP+D +LPDI + VY + Sbjct: 48 EEAAELADGVGLWYGR-----SKAYEARTPLMVAATYGSAGVVSLLVGLGGCVDVNRRPGADGATALHCAASGGSRNAVAVVKLLLAAGADPATPDSAGRFPADVILAPPASP--DALGDLEVLLGRRRALAVATSVASGSSSPPLSSSPDEGNRSPSSRSSSLSPITVDRGKKEYPVDPTLPDIKSSVYAS 232 HSP 2 Score: 23.8682 bits (50), Expect = 5.378e-19 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 193 GALYNKSSILLELSASDDISALR 261 G ++ + LLEL+A+DD+ LR Sbjct: 18 GGRRDRLAALLELAAADDVDGLR 40
BLAST of CK934181 vs. ExPASy Swiss-Prot
Match: C3H67_ORYSJ (Zinc finger CCCH domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=Os12g0515500 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11 Identity = 52/164 (31.71%), Postives = 79/164 (48.17%), Query Frame = 3 Query: 291 DEPSFWYGRRIGSKKMGFEERTPIMIAAMFGGVAVLKYVIETGK-VNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVGLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSKDGTEKKEYPIDXSLPDINNGVYGT 779 DEP+ WY + G E TP+M+AA++G V L ++ V+ NRA S T LH A AGG+ S+ V LL+A AD +D H ++RA +L+ +++ + L+++ +KE+P D SLPDI NG Y + Sbjct: 39 DEPAPWY-----TPARGAEPLTPLMVAAVYGSVGCLDALLSPPYLVDPNRASASSLSTPLHLAAAGGSASAPAAVSRLLAAGADPALLD------------------HLQRRASDLVALPPNSLPLKNHLLSLL--------GARKEWPPDPSLPDIKNGAYAS 171 The following BLAST results are available for this feature:
BLAST of CK934181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934181 ID=CK934181; Name=CK934181; organism=Citrus sinensis; type=EST; length=781bpback to top |