CK934248
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934248 vs. ExPASy Swiss-Prot
Match: FATB_GOSHI (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum GN=FATB1 PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.476e-45 Identity = 99/149 (66.44%), Postives = 103/149 (69.13%), Query Frame = 1 Query: 403 SVAKTKNLGSANLXXXXXXXXXXXLQVKANAQAPSKINGTSVGLTTPAESLKNGDISTSSPPPRTFINQLPDWSMXXXXXXXXXXXXEKQWMMLDWKPRRSDMLVDPFGIGKIVQDGFIFRQNFSXXSYEIGADGTASIETLMNHLQET 849 S +K K LGS LQVKANAQAP KINGT V TTP E KN D SSPPPRTFINQLPDWSM EKQWMMLDWKPRR DM++DPFGIGKIVQDG +F QNFS SYEIGAD TASIETLMNHLQET Sbjct: 20 SDSKNKKLGSIK---SKPSVSSGSLQVKANAQAPPKINGT-VASTTPVEGSKNDD-GASSPPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDMVIDPFGIGKIVQDGLVFSQNFSIRSYEIGADQTASIETLMNHLQET 163
BLAST of CK934248 vs. ExPASy Swiss-Prot
Match: FATB_CUPHO (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana GN=FATB1 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42 Identity = 86/125 (68.80%), Postives = 95/125 (76.00%), Query Frame = 1 Query: 475 LQVKANAQAPSKINGTSVGLTTPAESLKNGDISTSSPPPRTFINQLPDWSMXXXXXXXXXXXXEKQWMMLDWKPRRSDMLVDPFGIGKIVQDGFIFRQNFSXXSYEIGADGTASIETLMNHLQET 849 LQVKANA AP KING+ VGL + LK + + S+PPPRTFINQLPDWSM EKQWMMLDWKP+R DMLVDPFG+G IVQDG +FRQNFS SYEIGAD TASIET+MNHLQET Sbjct: 45 LQVKANASAPPKINGSPVGLKSGG--LKTQEDAHSAPPPRTFINQLPDWSMLLAAITTVFLAAEKQWMMLDWKPKRPDMLVDPFGLGSIVQDGLVFRQNFSIRSYEIGADRTASIETVMNHLQET 167
BLAST of CK934248 vs. ExPASy Swiss-Prot
Match: FATB_CINCA (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cinnamomum camphora GN=FATB1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.050e-11 Identity = 51/128 (39.84%), Postives = 64/128 (50.00%), Query Frame = 1 Query: 475 LQVKA-NAQAPSK-INGTSVGLTTPAESLKNGDISTSSPPPRTFINQLPDWSMXXXXXXXXXXXXEKQWMMLDWKPRRS--DMLVDPFGIGKIVQDGFIFRQNFSXXSYEIGADGTASIETLMNHLQE 846 LQ++A NAQ K INGT T ESLK +LPDWSM EKQW L+WKP+ + +L D FG G +FR+ F+ SYE+G D + SI +MNHLQE Sbjct: 32 LQLRAGNAQTSLKMINGTKFSYT---ESLK----------------KLPDWSMLFAVITTIFSAAEKQWTNLEWKPKPNPPQLLDDHFG-----PHGLVFRRTFAIRSYEVGPDRSTSIVAVMNHLQE 135
BLAST of CK934248 vs. ExPASy Swiss-Prot
Match: FATB_UMBCA (Lauroyl-acyl carrier protein thioesterase, chloroplastic OS=Umbellularia californica GN=FATB1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11 Identity = 49/128 (38.28%), Postives = 63/128 (49.22%), Query Frame = 1 Query: 475 LQVKA-NAQAPSK-INGTSVGLTTPAESLKNGDISTSSPPPRTFINQLPDWSMXXXXXXXXXXXXEKQWMMLDWKPRRS--DMLVDPFGIGKIVQDGFIFRQNFSXXSYEIGADGTASIETLMNHLQE 846 LQ++A NA K INGT T ESLK +LPDWSM EKQW L+WKP+ +L D FG+ G +FR+ F+ SYE+G D + SI +MNH+QE Sbjct: 32 LQLRAGNAPTSLKMINGTKFSYT---ESLK----------------RLPDWSMLFAVITTIFSAAEKQWTNLEWKPKPKLPQLLDDHFGL-----HGLVFRRTFAIRSYEVGPDRSTSILAVMNHMQE 135 The following BLAST results are available for this feature:
BLAST of CK934248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934248 ID=CK934248; Name=CK934248; organism=Citrus sinensis; type=EST; length=849bpback to top |