CK934355
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934355 vs. ExPASy Swiss-Prot
Match: H1_SOLPN (Histone H1 OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.500e-26 Identity = 57/74 (77.03%), Postives = 66/74 (89.19%), Query Frame = 2 Query: 233 SKTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 454 +K +HPPYFQMI EAL+AL +K GSSPYA+AKYME+KHKDELPANFRKIL +QLK+ AAKG LIKI+ASYKLS Sbjct: 44 AKAVTHPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLS 117
BLAST of CK934355 vs. ExPASy Swiss-Prot
Match: H1_WHEAT (Histone H1 OS=Triticum aestivum PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17 Identity = 40/72 (55.56%), Postives = 55/72 (76.39%), Query Frame = 2 Query: 239 TPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 454 TP+HP Y +M++EA+ AL+++SGSS AI K++E+KHK LPANFRKIL Q+K A G L K++ SYKL+ Sbjct: 52 TPAHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKLA 123
BLAST of CK934355 vs. ExPASy Swiss-Prot
Match: H1_MAIZE (Histone H1 OS=Zea mays PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17 Identity = 40/72 (55.56%), Postives = 58/72 (80.56%), Query Frame = 2 Query: 239 TPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 454 +P+H PY +M++EA+ +L++++GSS YAIAK++E+KHK +LP NFRK+L VQLK A G L K++ SYKLS Sbjct: 47 SPTHLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKLS 118
BLAST of CK934355 vs. ExPASy Swiss-Prot
Match: H1_SOLLC (Histone H1 OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16 Identity = 39/74 (52.70%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 230 QSKTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 451 +S TP+HPPYF+MI +A++ L++++GSS +AI K++EEK K LP+NF+K+L QLK F A L+K++ SYKL Sbjct: 50 RSATPTHPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQK-SLPSNFKKLLLTQLKKFVASEKLVKVKNSYKL 122
BLAST of CK934355 vs. ExPASy Swiss-Prot
Match: H1_EUPES (Histone H1 OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.317e-14 Identity = 36/71 (50.70%), Postives = 55/71 (77.46%), Query Frame = 2 Query: 239 TPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 451 T SHP +F+MI++A+ L++++GSS YAI K++E+KHK +LP+NFRK+L LK A G L+K++ S+KL Sbjct: 48 TSSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHK-QLPSNFRKLLLFHLKKLVASGKLVKVKNSFKL 117
BLAST of CK934355 vs. ExPASy Swiss-Prot
Match: H1_PEA (Histone H1 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.720e-14 Identity = 39/70 (55.71%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 245 SHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 454 SHP Y +MI +A+++L++K+GSS YAIAK++EEK K +LPANF+K+L LK A G LIK++ S+KLS Sbjct: 61 SHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQK-QLPANFKKLLLQNLKKNVASGKLIKVKGSFKLS 129
BLAST of CK934355 vs. ExPASy Swiss-Prot
Match: H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13 Identity = 36/71 (50.70%), Postives = 52/71 (73.24%), Query Frame = 2 Query: 239 TPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 451 T SHP Y +MI +A++ L++++GSS YAI K++EEKHK LP FRK+L V LK A L+K++AS+K+ Sbjct: 59 TSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHK-SLPPTFRKLLLVNLKRLVASEKLVKVKASFKI 128
BLAST of CK934355 vs. ExPASy Swiss-Prot
Match: H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13 Identity = 36/69 (52.17%), Postives = 52/69 (75.36%), Query Frame = 2 Query: 245 SHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 451 SHP Y +MI +A++ L++++GSS YAI K++EEK K ELP FRK+L + LK A G L+K++AS+KL Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRK-ELPPTFRKLLLLNLKRLVASGKLVKVKASFKL 128
BLAST of CK934355 vs. ExPASy Swiss-Prot
Match: H12_VOLCA (Histone H1-II OS=Volvox carteri GN=H1-II PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.325e-11 Identity = 33/72 (45.83%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 242 PSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKH-KDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 454 P+HPPY QM+T+A+++L+++ GSS A+ K++E K+ KD F K L++ LK F G L+K++ SYKLS Sbjct: 23 PTHPPYIQMVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKVKNSYKLS 94 The following BLAST results are available for this feature:
BLAST of CK934355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934355 ID=CK934355; Name=CK934355; organism=Citrus sinensis; type=EST; length=848bpback to top |