CK934385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_FLAPR (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei GN=GDCSH PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.685e-49 Identity = 94/138 (68.12%), Postives = 112/138 (81.16%), Query Frame = 3 Query: 93 SVFHRGFSSVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEEDSKH 506 S R FSSV+ LKYA+SHEWVK +G+ ATIGITDHAQDHLG+VV+V+LPE G +V + FGAVESVKATSDVNSP+SG++VEVN +LS +P L+NSSPYEDGW+IKV+ N EL LM A +YTKFCEEEDS H Sbjct: 25 SPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_FLAAN (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala GN=GDCSH PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.981e-49 Identity = 93/138 (67.39%), Postives = 112/138 (81.16%), Query Frame = 3 Query: 93 SVFHRGFSSVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEEDSKH 506 S R FSSV+ LKYA+SHEWVK +G+ ATIGITDHAQDHLG+VV+V+LPE G +V + FGAVESVKATSDVNSP+SG++VEVN +LS +P L+NSSPYEDGW+IKV+ N EL LM A +YTKFCEEED+ H Sbjct: 25 SPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_PEA (Glycine cleavage system H protein, mitochondrial OS=Pisum sativum GN=GDCSH PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.282e-47 Identity = 89/134 (66.42%), Postives = 110/134 (82.09%), Query Frame = 3 Query: 105 RGFSSVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEEDSKH 506 R FS+V+ LKYA SHEWVK +G+ ATIGITDHAQDHLG+VV+VELPE GV+V + FGAVESVKATSDVNSP+SG+V+EVN L+ P L+NSSPYEDGW+IK++ + EL+ L+ A +YTKFCEEED+ H Sbjct: 32 RCFSNVLDGLKYAPSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEEEDAAH 165
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH2_ARATH (Probable glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana GN=At1g32470 PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.599e-47 Identity = 88/134 (65.67%), Postives = 112/134 (83.58%), Query Frame = 3 Query: 105 RGFSSVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEEDSKH 506 R FSSV++ LKYA+SHEWVK +G+ ATIGITDHAQDHLG+VV+VELPE +V ++ SFGAVESVKATS++ SP+SG+V+EVN +L+ SP L+NSSPYEDGW+IKV+ + EL+ LM +YTKFCEEED+ H Sbjct: 33 RCFSSVLEGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH1_ARATH (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSH PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.127e-46 Identity = 86/136 (63.24%), Postives = 113/136 (83.09%), Query Frame = 3 Query: 99 FHRGFSSVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEEDSKH 506 F R FS+V++ LKYA+SHEWVK +G+ ATIGIT HAQDHLG+VV+VELPE +V ++ SFGAVESVKATS++ SP+SG+++EVN++L+ SP L+NSSPYEDGW+IKV+ + EL+ LM +YTKFCEEED+ H Sbjct: 30 FSRCFSTVLEGLKYANSHEWVKHEGSVATIGITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTESPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_ORYSJ (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. japonica GN=GDCSH PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 8.084e-46 Identity = 87/132 (65.91%), Postives = 107/132 (81.06%), Query Frame = 3 Query: 105 RGFSSVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEEDS 500 R FS+V+ LKY+ SHEWVK DG+ ATIGITDHAQ HLG+VV+VELPE G V Q +FG VESVKATSD+NSP+SG+VVEVN++LS +P L+NSSPYEDGW+IKV+ + EL L+D +YTK CEEED+ Sbjct: 32 RYFSTVLDGLKYSSSHEWVKNDGSVATIGITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_ORYSI (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. indica GN=GDCSH PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 8.084e-46 Identity = 87/132 (65.91%), Postives = 107/132 (81.06%), Query Frame = 3 Query: 105 RGFSSVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEEDS 500 R FS+V+ LKY+ SHEWVK DG+ ATIGITDHAQ HLG+VV+VELPE G V Q +FG VESVKATSD+NSP+SG+VVEVN++LS +P L+NSSPYEDGW+IKV+ + EL L+D +YTK CEEED+ Sbjct: 32 RYFSTVLDGLKYSSSHEWVKNDGSVATIGITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_FLATR (Glycine cleavage system H protein, mitochondrial OS=Flaveria trinervia GN=GDCSH PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.072e-45 Identity = 90/136 (66.18%), Postives = 108/136 (79.41%), Query Frame = 3 Query: 93 SVFHRGFSS--VIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEE 494 S R FSS V+ LKYA+SHEWVK +G+ ATIGITDHAQDHLG+VV+VELPEVG +V + FGAVESVKATSDVNSP+SG++VEVN +L+ +P L+N SPYEDGW+IKV+ N EL LM +YTKFCEEE Sbjct: 25 SPLFRCFSSAAVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEVGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLTKTPGLINKSPYEDGWMIKVKPSNPSELDSLMGPKEYTKFCEEE 160
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_MESCR (Glycine cleavage system H protein, mitochondrial OS=Mesembryanthemum crystallinum GN=GDCSH PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.875e-43 Identity = 86/132 (65.15%), Postives = 104/132 (78.79%), Query Frame = 3 Query: 105 RGFSSVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEEEDS 500 R FS+V+ LKYA SHEWVK G+ ATIGITDHAQ HLGDVV+ ELPE G V F +VESVKATSDVNSP+SG++VEVN +LS SP L+NSSPYE+GW++KV+ N EL+ LM + +YTKFCEEED+ Sbjct: 32 RCFSTVLDGLKYASSHEWVKHGGSVATIGITDHAQGHLGDVVFAELPEGGA-VSAGKPFASVESVKATSDVNSPISGEIVEVNTKLSDSPGLLNSSPYEEGWMVKVKPSNPAELESLMGSKEYTKFCEEEDA 162
BLAST of CK934385 vs. ExPASy Swiss-Prot
Match: GCSH_FLAPU (Glycine cleavage system H protein, mitochondrial (Fragment) OS=Flaveria pubescens GN=GDCSH PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.755e-43 Identity = 84/128 (65.62%), Postives = 103/128 (80.47%), Query Frame = 3 Query: 93 SVFHRGFSSVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYT 476 S R FSSV+ LKYA+SHEWVK +G+ AT+GITDHAQDHLG+VV+V+LPE G +V + FGAVESVKATSDVNSP+SG++VEVN +LS +P L+NSSPYEDGW+IKV+ N EL LM A +YT Sbjct: 25 SPLSRCFSSVLDGLKYANSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYT 152 The following BLAST results are available for this feature:
BLAST of CK934385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934385 ID=CK934385; Name=CK934385; organism=Citrus sinensis; type=EST; length=822bpback to top |