CK934995

Overview
NameCK934995
Unique NameCK934995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934995 vs. ExPASy Swiss-Prot
Match: RL9_PEA (60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.638e-89
Identity = 166/194 (85.57%), Postives = 181/194 (93.30%), Query Frame = 3
Query:   75 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEEAGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTILGEE 656
            MKTILSSETM+IPDGV +K+NAKVIEVEGPRGKL RDFKHLNLDF L+TDE  GK+KLKIDAWFGSRKTSAAIRTALSHV NLITGVTKG+RYKMRFVYA FPINASI N+NK+IEIRNFLGEKKVRKVD+LDGV++IRS+KVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYVSEK  ++ EE
Sbjct:    1 MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDEN-GKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFLGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGAVVVEE 193          
BLAST of CK934995 vs. ExPASy Swiss-Prot
Match: RL91_ARATH (60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=2 SV=3)

HSP 1 Score: 328.561 bits (841), Expect = 2.793e-89
Identity = 161/194 (82.99%), Postives = 180/194 (92.78%), Query Frame = 3
Query:   75 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEEAGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTILGEE 656
            MKTILSSETMDIPD V +K++AKVIEVEGPRGKL RDFKHLNLDF L+ D E GK+KLKID+WFG+RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASIG + K+IEIRNFLGEKKVRKV+MLDGVT++RS+KVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYVSEKS I+ EE
Sbjct:    1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKIDSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKSKIVEEE 194          
BLAST of CK934995 vs. ExPASy Swiss-Prot
Match: RL92_ARATH (60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.174e-87
Identity = 158/194 (81.44%), Postives = 177/194 (91.24%), Query Frame = 3
Query:   75 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEEAGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTILGEE 656
            MKTILSSETMDIPDGV +K+NAKVIEVEGPRGKL+RDFKHLNLDF L+ D+  GKR+LKID+WFGSRKTSA+IRTALSHV NLI GVT+G+ Y+MRFVYAHFPINASI  NNK+IEIRNFLGEKKVRKV+MLDGV ++RS+KVKDE++L+GNDIELVSRS ALINQKCHVK KDIRKFLDGIYVSEK  I  EE
Sbjct:    1 MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKIDSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGKIAVEE 194          
BLAST of CK934995 vs. ExPASy Swiss-Prot
Match: RL9_ORYSJ (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3)

HSP 1 Score: 311.227 bits (796), Expect = 4.615e-84
Identity = 155/190 (81.58%), Postives = 175/190 (92.11%), Query Frame = 3
Query:   75 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEEAGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 644
            MKTIL+SETM+IP+GV V++ AKV+ VEGPRGKL+R+FKHLNLDF L+     G RKL++DAWFG+R+T AAIRTA+SHV NLITGVTKGYRYKMRFVYAHFPINASI N+N AIEIRNFLGEKKVRKVDML+GVT++RS+KVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS+K TI
Sbjct:    1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLE----GGRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTI 186          
BLAST of CK934995 vs. ExPASy Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.159e-57
Identity = 113/194 (58.25%), Postives = 140/194 (72.16%), Query Frame = 3
Query:   75 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEEAGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTILGEE 656
            MKTILS++T+DIPD V V +  + + V+GPRG L R+F H+NL+  L+  ++   +KL++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV    S   KDELVL+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVSEK T++  E
Sbjct:    1 MKTILSTQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKKQ---KKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVVEPE 191          
BLAST of CK934995 vs. ExPASy Swiss-Prot
Match: RL9_MOUSE (60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 4.809e-57
Identity = 110/190 (57.89%), Postives = 140/190 (73.68%), Query Frame = 3
Query:   75 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEEAGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 644
            MKTILS++T+DIP+ V++ +  + + V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I  N   +EIRNFLGEK +R+V M  GV    S   KDEL+L+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVSEK T+
Sbjct:    1 MKTILSNQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          
BLAST of CK934995 vs. ExPASy Swiss-Prot
Match: RL9_MACFA (60S ribosomal protein L9 OS=Macaca fascicularis GN=RPL9 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.281e-57
Identity = 111/190 (58.42%), Postives = 139/190 (73.16%), Query Frame = 3
Query:   75 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEEAGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 644
            MKTILS++T+DIP+ V + +  + + V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A IRT  SHV N+I GVT G+RYKMR VYAHFPIN  I  N   +EIRNFLGEK +R+V M  GV    S   KDEL+L+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVSEK T+
Sbjct:    1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATIRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          
BLAST of CK934995 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.281e-57
Identity = 110/190 (57.89%), Postives = 139/190 (73.16%), Query Frame = 3
Query:   75 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEEAGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 644
            MKTILS++T+DIP+ V + +  + + V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I  N   +EIRNFLGEK +R+V M  GV    S   KDEL+L+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVSEK T+
Sbjct:    1 MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          
BLAST of CK934995 vs. ExPASy Swiss-Prot
Match: RL9_RAT (60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.203e-57
Identity = 110/190 (57.89%), Postives = 139/190 (73.16%), Query Frame = 3
Query:   75 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEEAGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 644
            MKTILS++T+DIP+ V + +  + + V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I  N   +EIRNFLGEK +R+V M  GV    S   KDEL+L+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVSEK T+
Sbjct:    1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          
BLAST of CK934995 vs. ExPASy Swiss-Prot
Match: RL9_HUMAN (60S ribosomal protein L9 OS=Homo sapiens GN=RPL9 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.203e-57
Identity = 110/190 (57.89%), Postives = 139/190 (73.16%), Query Frame = 3
Query:   75 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEEAGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 644
            MKTILS++T+DIP+ V + +  + + V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I  N   +EIRNFLGEK +R+V M  GV    S   KDEL+L+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVSEK T+
Sbjct:    1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          
The following BLAST results are available for this feature:
BLAST of CK934995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
RL9_PEA1.638e-8985.5760S ribosomal protein L9 OS=Pisum sativum GN=RPL9 ... [more]
RL91_ARATH2.793e-8982.9960S ribosomal protein L9-1 OS=Arabidopsis thaliana... [more]
RL92_ARATH1.174e-8781.4460S ribosomal protein L9-2 OS=Arabidopsis thaliana... [more]
RL9_ORYSJ4.615e-8481.5860S ribosomal protein L9 OS=Oryza sativa subsp. ja... [more]
RL9_ICTPU2.159e-5758.2560S ribosomal protein L9 OS=Ictalurus punctatus GN... [more]
RL9_MOUSE4.809e-5757.8960S ribosomal protein L9 OS=Mus musculus GN=Rpl9 P... [more]
RL9_MACFA6.281e-5758.4260S ribosomal protein L9 OS=Macaca fascicularis GN... [more]
RL9_BOVIN6.281e-5757.8960S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=... [more]
RL9_RAT8.203e-5757.8960S ribosomal protein L9 OS=Rattus norvegicus GN=R... [more]
RL9_HUMAN8.203e-5757.8960S ribosomal protein L9 OS=Homo sapiens GN=RPL9 P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004224_C08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIIF_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934995 ID=CK934995; Name=CK934995; organism=Citrus sinensis; type=EST; length=853bp
GGGGAGGGTTTTGCGGCATCTCTAGCTTAAGCGTAGGAGGAGAAGAANNN
NGAAGATATTACAGAGAGAGGAAAATGAAGACAATTCTCTCTTCAGAGAC
TATGGACATCCCAGATGGGGTGAAAGTCAAGATAAATGCAAAGGTTATTG
AAGTAGAGGGACCGAGAGGTAAGCTCAGCCGCGACTTCAAGCATTTGAAC
CTCGACTTCCATCTCATGACTGACGAGGAAGCCGGTAAGCGCAAGCTTAA
GATCGATGCCTGGTTCGGCTCTCGCAAGACCAGCGCCGCCATCAGAACTG
CCCTCAGCCATGTCGGCAATCTCATCACTGGTGTTACCAAGGGCTATCGC
TACAAGATGAGATTTGTGTACGCTCACTTTCCCATCAACGCCTCCATCGG
TAACAATAACAAGGCCATTGAGATCCGTAACTTTCTTGGAGAGAAAAAGG
TTCGAAAAGTGGATATGCTTGATGGTGTTACCGTCATTAGGTCCGATAAG
GTTAAGGATGAACTCGTTCTTGATGGAAATGACATTGAACTCGTGTCTCG
CTCTGCTGCTCTAATCAATCAGAAATGCCATGTGAAGAACAAGGACATTA
GGAAATTTCTTGATGGGATCTATGTCAGTGAGAAAAGCACCATACTTGGA
GAAGAATGATGATTAGCTTTCGAATTTTCTTGTCATAGTAATGTTATGAA
TTTTTTTTTAAATCTTTTTAATTTTGCCTCTTACTTTGAGTTGAGGACAT
GCTTTTGGTTGTATTTGGGATTTGGGACTTGGGAGTTCTAGATTTCAATT
TTATGTCTTCAATTGCTATCATCACAATATATGTATGGATTTTATAGCTA
TGC
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