CK935028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.373e-58 Identity = 83/141 (58.87%), Postives = 98/141 (69.50%), Query Frame = 3 Query: 438 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFXXTE 860 R+ ELPPVDMFVTTAD EPP+I VNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYNV++RAPF YF +DW+ K+EY+KLSQ +E A S D F T+ Sbjct: 88 RVHELPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFMYF-RNSPEAAEGSEFSKDWEMTKREYEKLSQKVEDATGSSHWLDAEDDFEAFLNTK 227 HSP 2 Score: 78.9518 bits (193), Expect = 1.373e-58 Identity = 36/88 (40.91%), Postives = 47/88 (53.41%), Query Frame = 1 Query: 64 MANTKSSCLPLYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 MA + S PL E++ HK+ + RA W +AFLCE+CFTF+W+LI N KW+P YKTYP+RL ER Sbjct: 1 MAESSSPLPPLCERISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDTVWIVAFLCETCFTFVWLLITNIKWSPADYKTYPERLDER 88
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.132e-54 Identity = 78/141 (55.32%), Postives = 97/141 (68.79%), Query Frame = 3 Query: 438 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFXXTE 860 R+ +LP VDMFVTTAD EPPI+ NT+LSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYN+++RAPFRYF +DW+ K+EY+KLS+ +E A S D F T+ Sbjct: 88 RVHDLPSVDMFVTTADPVREPPILVANTLLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNIKVRAPFRYF-LNPPAATESSEFSKDWEITKREYEKLSRRVEDATGDSHWLDAEDDFEDFSNTK 227 HSP 2 Score: 74.3294 bits (181), Expect = 1.132e-54 Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 1 Query: 64 MANTKSSCLPLYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 MA++ SS PL EK+ +KN + R + W +AFLCES F+FIW+LI + KW+P +YK+YP+RL ER Sbjct: 1 MADSSSSLPPLCEKISYKNYFLRVVDLTILGFLFSLLLYRILLMNQNNSVWVVAFLCESFFSFIWLLITSIKWSPASYKSYPERLDER 88
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 7.871e-53 Identity = 78/141 (55.32%), Postives = 97/141 (68.79%), Query Frame = 3 Query: 438 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFXXTE 860 R+ +LP VDMFV TAD EPPI+ VNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYN+++RAPFRYF +DW+ K+EY+KL + +E A S L + F T+ Sbjct: 88 RVYDLPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKVRAPFRYF-LNPFAATEGSEFSRDWEMTKREYEKLCRKVEDATGDSHLLGTDNELEAFSNTK 227 HSP 2 Score: 69.3218 bits (168), Expect = 7.871e-53 Identity = 33/88 (37.50%), Postives = 44/88 (50.00%), Query Frame = 1 Query: 64 MANTKSSCLPLYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 MA++ S PLYE + +K+ RA +G W +AFLCESCF+F+W+L KW+P K YP RL ER Sbjct: 1 MADSSCSLPPLYENISYKSYILRAVDLTILGLLFSLLLHRILYMSQNGIIWLVAFLCESCFSFVWLLSTCTKWSPAETKPYPDRLDER 88
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 1.026e-52 Identity = 80/141 (56.74%), Postives = 94/141 (66.67%), Query Frame = 3 Query: 438 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFXXTE 860 R+ +LP VDMFV TAD EPPII VNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKF K+W PFCKKYNV++RAPFRYF +DWK MK+EY KL + +E A S D F T+ Sbjct: 88 RVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYF-LNPLVATDDSVFSKDWKMMKREYVKLCRKVEDATGDSHWLDADDDFEAFSNTK 227 HSP 2 Score: 67.781 bits (164), Expect = 1.026e-52 Identity = 33/88 (37.50%), Postives = 45/88 (51.14%), Query Frame = 1 Query: 64 MANTKSSCLPLYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 MA++ SS LPL E++ HK+ R + W +AFLCESCF+F+W++I KW+P K YP RL ER Sbjct: 1 MADSSSSLLPLCERISHKSYILRIVDLTILVLLFSLLWYRILHMCENNTIWLVAFLCESCFSFMWLIITCIKWSPAEDKPYPNRLDER 88
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 3.795e-49 Identity = 76/141 (53.90%), Postives = 96/141 (68.09%), Query Frame = 3 Query: 438 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFXXTE 860 R+ +LP VDMFV TAD EPPI+ V+TVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYN ++RAP RYF +DW+ K+EY+KL + +E A S + D+ F T+ Sbjct: 88 RVHDLPSVDMFVPTADPVREPPIMVVDTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNTRVRAPSRYFLKPISVATEDYEFNRDWEKTKREYEKLRRKVEDATGDSHMLDVEDDFEAFSNTK 228 HSP 2 Score: 55.0694 bits (131), Expect = 3.795e-49 Identity = 28/88 (31.82%), Postives = 40/88 (45.45%), Query Frame = 1 Query: 64 MANTKSSCLPLYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 MA++ S PL E++ + N + RA + W +AF CESCF + +LI KW+P K +P RL ER Sbjct: 1 MADSSFSLPPLCERISYTNYFLRAVYLTVLGLFFSLLLHRIRHTSEYDNVWLVAFFCESCFFLVCLLITCLKWSPADTKPFPDRLDER 88
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 2.375e-45 Identity = 80/144 (55.56%), Postives = 94/144 (65.28%), Query Frame = 3 Query: 438 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPV--HKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFXXTER 863 RI ELP VDMFVTTAD LEPP++TVNTVLSLLA+DYP KLACYVSDD CSPL Y+L EA++FA+ WVPFC+++ V +RAPFRYF +DW MK EY+KL IE A + S L G F ER Sbjct: 87 RIDELPAVDMFVTTADPVLEPPLVTVNTVLSLLALDYPAAGEKLACYVSDDGCSPLTCYALREAARFARTWVPFCRRHGVAVRAPFRYFSSTPEFGPADGKFLEDWTFMKSEYEKLVHRIEDADEPSLLRHGGGEFAEFLDVER 230 HSP 2 Score: 48.521 bits (114), Expect = 2.375e-45 Identity = 18/35 (51.43%), Postives = 26/35 (74.29%), Query Frame = 1 Query: 223 AFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 A CE+ FTF+W+L VN KW+P+ + T+P+ L ER Sbjct: 53 ALACEAWFTFMWLLNVNAKWSPVRFDTFPENLAER 87
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.355e-38 Identity = 85/176 (48.30%), Postives = 106/176 (60.23%), Query Frame = 3 Query: 345 LALIISASFAIVFVILQVXXXXXXXXCVRLN----RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFXXTE 860 LA + F++V++I +N R+ +LP +DMFV TAD E PIITVNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKF K+W PFCKKYNV++RAPFRYF +DWK MK+EY KL + +E A S D F T+ Sbjct: 53 LAFFCESCFSLVWLIFTCLKWSPAEDIPYINTLNERVHDLPSLDMFVPTADTVRESPIITVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYF-LNPLVATDDSVFSKDWKMMKREYVKLCRKVEDATGDSHWLDADDDFEAFSNTK 227
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 4.222e-32 Identity = 72/129 (55.81%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPV--HKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQ---DWKNMKKEYDKLSQNIEHAAKRSSL 818 ELP VDM VTTAD LEPP++TVNTVLSLLA+DYP +LACYVSDD CSPL ++L EA+ FA WVPFC++Y V +RAPFRYF + DW MK EYDKL + I++ +RS L Sbjct: 133 ELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTFMKDEYDKLVRRIKNTDERSLL 261
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.222e-32 Identity = 72/129 (55.81%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPV--HKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQ---DWKNMKKEYDKLSQNIEHAAKRSSL 818 ELP VDM VTTAD LEPP++TVNTVLSLLA+DYP +LACYVSDD CSPL ++L EA+ FA WVPFC++Y V +RAPFRYF + DW MK EYDKL + I++ +RS L Sbjct: 133 ELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTFMKDEYDKLVRRIKNTDERSLL 261
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.012e-30 Identity = 61/117 (52.14%), Postives = 78/117 (66.67%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791 +L PVD+FV+T D EPPIIT NT+LS+LAVDYPV+K++CYVSDD S L F +L E S+FA+ WVPFCKKYNV+ RAP YF +D + MK+EY++ I Sbjct: 290 KLAPVDVFVSTVDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYFSEKIDYLKDKVQTTFVKDRRAMKREYEEFKVRI 406 HSP 2 Score: 35.4242 bits (80), Expect = 2.012e-30 Identity = 15/38 (39.47%), Postives = 20/38 (52.63%), Query Frame = 1 Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 W ++ +CE F WIL KW P+ +TY RL R Sbjct: 244 WLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMR 281 The following BLAST results are available for this feature:
BLAST of CK935028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935028 ID=CK935028; Name=CK935028; organism=Citrus sinensis; type=EST; length=868bpback to top |