CK935596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935596 vs. ExPASy Swiss-Prot
Match: YH75_SCHPO (Vesicle-associated membrane protein-associated protein C16G5.05c OS=Schizosaccharomyces pombe GN=SPBC16G5.05c PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.831e-15 Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 130 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDIIVTMQAQKEAP-PDMQCKDKFLLQSVKTNDGTTAKDINAEMF---NKEAGHVVEECKLRVIY 423 + + N V FKVKTT PK YCVRPN+G + P+ST ++ V +QA KE P PD +C+DKFL+QS+ D T+ N F ++ G + + K+R +Y Sbjct: 23 ISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDKFLIQSMAIGDADTSNVENYHEFWTEMEKQGRSIFDRKIRCVY 124
BLAST of CK935596 vs. ExPASy Swiss-Prot
Match: YDFC_SCHPO (Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe GN=SPAC17C9.12 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.714e-13 Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 94 FPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDIIVTMQAQKEAP-PDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLRVIY 423 FP L + + C L+L N + FKVKTT PK+YCVRPN G + S + V +Q P P +C+DKFL+QS + DI A+++ + + + E K+R +Y Sbjct: 11 FPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQPLDHEPAPGTKCRDKFLVQSTELKPELQGMDI-ADIWTQVSKANISERKIRCVY 120
BLAST of CK935596 vs. ExPASy Swiss-Prot
Match: VP33_APLCA (Vesicle-associated membrane protein/synaptobrevin-binding protein OS=Aplysia californica PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.514e-12 Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 61 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTND 336 + L +EP EL+F ++ L+LSN TD + FKVKTT PK+YCVRPN+GI+ P+++ + V +Q P + K KF++QS+ D Sbjct: 6 QALILEPAGELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSIAVAVMLQPFNYDPNEKN-KHKFMVQSMYAPD 97
BLAST of CK935596 vs. ExPASy Swiss-Prot
Match: VAPA_PONAB (Vesicle-associated membrane protein-associated protein A OS=Pongo abelii GN=VAPA PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.228e-11 Identity = 40/115 (34.78%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 79 PLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLRVIY 423 P +LKF ++ +L+L N +D V FKVKTT P++YCVRPN+GI+ P ST + V +Q + P+ + K KF++Q++ T+ D+ A ++ + + + KLR ++ Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQ-PFDYDPNEKSKHKFMVQTIFAPPNTS--DMEA-VWKEAKPDELMDSKLRCVF 130
BLAST of CK935596 vs. ExPASy Swiss-Prot
Match: VAPA_HUMAN (Vesicle-associated membrane protein-associated protein A OS=Homo sapiens GN=VAPA PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.228e-11 Identity = 40/115 (34.78%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 79 PLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLRVIY 423 P +LKF ++ +L+L N +D V FKVKTT P++YCVRPN+GI+ P ST + V +Q + P+ + K KF++Q++ T+ D+ A ++ + + + KLR ++ Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQ-PFDYDPNEKSKHKFMVQTIFAPPNTS--DMEA-VWKEAKPDELMDSKLRCVF 130
BLAST of CK935596 vs. ExPASy Swiss-Prot
Match: VAPB_PIG (Vesicle-associated membrane protein-associated protein B OS=Sus scrofa GN=VAPB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.604e-11 Identity = 37/89 (41.57%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 61 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSV 324 ++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+GI+ ++ ++ V +Q + P+ + K KF++QS+ Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQ-PFDYDPNEKSKHKFMVQSM 93
BLAST of CK935596 vs. ExPASy Swiss-Prot
Match: VAPB_HUMAN (Vesicle-associated membrane protein-associated protein B/C OS=Homo sapiens GN=VAPB PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.604e-11 Identity = 37/89 (41.57%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 61 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSV 324 ++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+GI+ ++ ++ V +Q + P+ + K KF++QS+ Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQ-PFDYDPNEKSKHKFMVQSM 93
BLAST of CK935596 vs. ExPASy Swiss-Prot
Match: VAPB_BOVIN (Vesicle-associated membrane protein-associated protein B OS=Bos taurus GN=VAPB PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.604e-11 Identity = 37/89 (41.57%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 61 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSV 324 ++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+GI+ ++ ++ V +Q + P+ + K KF++QS+ Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQ-PFDYDPNEKSKHKFMVQSM 93
BLAST of CK935596 vs. ExPASy Swiss-Prot
Match: VAPB_RAT (Vesicle-associated membrane protein-associated protein B OS=Rattus norvegicus GN=Vapb PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.095e-11 Identity = 36/89 (40.45%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 61 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSV 324 ++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+G++ ++ ++ V +Q + P+ + K KF++QS+ Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGASLNVSVMLQ-PFDYDPNEKSKHKFMVQSM 93
BLAST of CK935596 vs. ExPASy Swiss-Prot
Match: VAPB_MOUSE (Vesicle-associated membrane protein-associated protein B OS=Mus musculus GN=Vapb PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.737e-11 Identity = 36/89 (40.45%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 61 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSV 324 ++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+G++ ++ ++ V +Q + P+ + K KF++QS+ Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGASLNVSVMLQ-PFDYDPNEKSKHKFMVQSM 93 The following BLAST results are available for this feature:
BLAST of CK935596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935596 ID=CK935596; Name=CK935596; organism=Citrus sinensis; type=EST; length=792bpback to top |