CK935643
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.042e-41 Identity = 82/120 (68.33%), Postives = 97/120 (80.83%), Query Frame = 2 Query: 5 PGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 364 P YE F+ NPQ++FL SLPTQLQATKVMAVQ+TLSTHSPDEEYL ++ ++ HW D +V+ F+KFS L +IEK IN RNKD +LK R GAG+PPYELLLP+S GVTGRGIPNSISI Sbjct: 798 PDYEMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.272e-31 Identity = 67/120 (55.83%), Postives = 85/120 (70.83%), Query Frame = 2 Query: 5 PGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 364 P + F+ +PQ F SS+P+ LQ TK MAV DTLSTHSPDEEY+G+ Q S W D E+++ F FSA + IEK I+ RN+D + RCGAG+ PYEL+ PSS PGVT RG+PNS+SI Sbjct: 808 PEFTSFIEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGE-RQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 926
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.037e-29 Identity = 66/117 (56.41%), Postives = 81/117 (69.23%), Query Frame = 2 Query: 14 EKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 364 +KF+ P+ L SLP+Q+QA KVMA D LS+HSPDEEY+G+ + W+ +P V F+KFS L+E E I+ RN + K RCGAGI PYELL P S PGVTGRGIPNSISI Sbjct: 782 KKFMARPEEVLLQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAE--PAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.539e-29 Identity = 64/120 (53.33%), Postives = 82/120 (68.33%), Query Frame = 2 Query: 5 PGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 364 P Y F+ +P+ + SS+P+ Q +K MAV DTLSTHSPDEEY+G+ Q S W D E++ F F+A + IEK I RN D + RCGAG+ PYELL+PSS PGVT RG+PNS+SI Sbjct: 801 PEYASFISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGE-RQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 9.464e-27 Identity = 64/117 (54.70%), Postives = 78/117 (66.67%), Query Frame = 2 Query: 14 EKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 364 E+FL NP P+Q+QAT VMAV D LS+HS DEEYLG + W +D V +D F+A L+EIE +I+ RNKD +LK RCGAGI PY+L+ P S GVTG GIPNS SI Sbjct: 810 ERFLDNPDQALRECFPSQVQATVVMAVLDVLSSHSTDEEYLG--GEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDSGVTGMGIPNSTSI 924
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.108e-26 Identity = 63/119 (52.94%), Postives = 76/119 (63.87%), Query Frame = 2 Query: 11 YEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHS-HWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 364 Y FL +P FL+++P L+ATK MAV DTLSTHSPDEEYLG+ W D + F+A++ E+ I RN D K RCGAG+ PYELL PSS PGVT RG+PNSISI Sbjct: 800 YAAFLADPHRFFLNAMPGVLEATKFMAVVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 918
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.754e-26 Identity = 64/117 (54.70%), Postives = 77/117 (65.81%), Query Frame = 2 Query: 14 EKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 364 E+FL NP P+Q+QAT VMAV D LSTHS DEEYLG + W +D V + F+A L+EIE +I+ RNKD +LK RCGAGI PY+L+ P S GVTG GIPNS SI Sbjct: 827 ERFLDNPDQALRECFPSQVQATVVMAVLDVLSTHSTDEEYLG--GEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 5.193e-25 Identity = 58/120 (48.33%), Postives = 76/120 (63.33%), Query Frame = 2 Query: 5 PGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 364 P Y + +P FLS+LP+ Q T M V DTLSTHS DEEYLG+ + W DP L +F+A++ E+ I RN D + RCGAG+ PYEL+ PSSGPG+T RG+PNS++I Sbjct: 782 PEYAHLVADPHRFFLSALPSLTQTTTFMTVIDTLSTHSADEEYLGE--RPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 899
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.794e-24 Identity = 55/117 (47.01%), Postives = 76/117 (64.96%), Query Frame = 2 Query: 14 EKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 364 ++F +P+ L + P+Q QAT VM D LSTHSPDEEY+G+ Q + W N+P + F++F L+ +E +I+ RN + LK R GAG+ YELL P+S GVTG G+P SISI Sbjct: 782 KEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGE--QQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.019e-22 Identity = 57/121 (47.11%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 2 SPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 364 +P +E+ NP FL ++ QLQ +++ + LSTHS DE YLGQ + W + E L F+KF ++EIEK I+ RN D LK R G PY LL PSS GVTGRGIPNS+SI Sbjct: 741 TPEFEELEKNPDKVFLKTITAQLQTLLGISLIEILSTHSSDEVYLGQRDS--KEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIPNSVSI 859 The following BLAST results are available for this feature:
BLAST of CK935643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935643 ID=CK935643; Name=CK935643; organism=Citrus sinensis; type=EST; length=647bpback to top |