EY736159
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736159 vs. ExPASy Swiss-Prot
Match: RB3GP_XENLA (Rab3 GTPase-activating protein catalytic subunit OS=Xenopus laevis GN=rab3gap1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.206e-24 Identity = 80/272 (29.41%), Postives = 131/272 (48.16%), Query Frame = 3 Query: 15 NLPREIHGAPPESFIVKLSEVIGSFK----NLRKMALFWCKVVAELRRLWSEEQHIPGIPLDETPDLNSCLLYQQLQVINCCLSRKRRHTIATE------SLESVMRQCSSNV------------------------EDSSPC---MDTMPETPVLYARVCTGELVIRLGA------YQPTDLIMLETGEPVYSPISQEGPLLTEDLIKETEELVLRTGSVGAGCXQ--------LLSDMQAFKAANPXCSLKDFVRWHSPPDWTETDQSDE 677 NL ++ AP S KL+ + ++ +A W + V E+R W IPG+ + +PDL CLL+Q+LQ++NCCL RK+ + S ES + + +S++ E+ C + + E+ AR E +Q +L++L +GEP+Y P++Q+ +T+DL++E E++ + G+ G LLSDM++FKAANP C L+DFVRW+SP D+ E + D+ Sbjct: 444 NLYSQLKSAPSNSLTYKLALCLCMVNFYHGGVKGVAHLWQEFVLEMRYRWENNFLIPGLA-NGSPDLKCCLLHQKLQMLNCCLERKKARDEGKKGNPLYSSSESSVNKTASDLLSPVEADKSKYEVAKSWDSWSDSEEEFFECHSDTEELKESGQESARKAKEETKENPSPKPEGRLHQSGNLMLLNSGEPLYIPVTQDPAPMTDDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCCLEDFVRWYSPRDYIEEEVMDD 714 HSP 2 Score: 23.483 bits (49), Expect = 1.206e-24 Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 1 Query: 718 KGQLSRRIQKEGNWGGELWETS 783 KG+LS R++ N E WET+ Sbjct: 721 KGELSARMKIPNNMWVEAWETA 742
BLAST of EY736159 vs. ExPASy Swiss-Prot
Match: RB3GP_RAT (Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus GN=Rab3gap1 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.211e-24 Identity = 77/274 (28.10%), Postives = 124/274 (45.26%), Query Frame = 3 Query: 18 LPREIHGAPPESFIVKLSEVIGSFK----NLRKMALFWCKVVAELRRLWSEEQHIPGIPLDETPDLNSCLLYQQLQVINCCLSRKR-----RHTIATESLESV----------------MRQCSSNVEDSSPCMDTMPETPVLYARVCTGELVIRLGAYQPTD---------------------LIMLETGEPVYSPISQEGPLLTEDLIKETEELVLRTGSVGAGCXQ--------LLSDMQAFKAANPXCSLKDFVRWHSPPDWTETDQSDE 677 L + AP +S KL+ + L+ +A W + V E+R W IPG+ PDL CLL+Q+LQ++NCC+ RK+ + T ++S+ +R ++ D+ ++ + + +R + T L +L GEP+Y P++QE +TEDL++E E++ + G+ G LLSDM++FKAANP C L+DFVRW+SP D+ E + +DE Sbjct: 237 LYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGLA-SGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSPSDSMTKAYPADAGKAGGQLGLDHLRDTEKEKGEAGKSWDSWSDSEEEFFECLSDAEDLRGNGQESTKKGGPKDMAPLKPEGRLHQHGKLTLLRNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCCLEDFVRWYSPRDYIEEEVTDE 509 HSP 2 Score: 24.2534 bits (51), Expect = 1.211e-24 Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 1 Query: 715 MKGQLSRRIQKEGNWGGELWETS 783 +KG+LS R++ N E WET+ Sbjct: 515 LKGELSARMKIPSNMWVEAWETA 537
BLAST of EY736159 vs. ExPASy Swiss-Prot
Match: RB3GP_DROME (Rab3 GTPase-activating protein catalytic subunit OS=Drosophila melanogaster GN=CG31935 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 2.187e-23 Identity = 77/241 (31.95%), Postives = 121/241 (50.21%), Query Frame = 3 Query: 21 PREIHGAPPESFIVKLSEVIGS----FKNLRKMALFWCKVVAELRRLWSEEQHIPGIPLDETPDLNSCLLYQQLQVINCCLSRK-RRHTIATESLESVMRQCSSNVEDSSP--------CMDTMPETPVLYARVCTGELVIRLGAYQPTDLIMLETGEPVYSPISQEGPLLTEDLIKETEELVLRTGSVGAG------CXQLLSDMQAFKAANPXCSLKDFVRWHSPPDWTE-TDQSDEAK 683 P I A P+S + +LS ++ + ++ MA W +LR LW +PGI PD +CLL+Q+LQ++N C+ R+ +R + E ++ + SS E+ C D V + + RL + ++ E E +Y P +QE TED +++ E++L+ G G+G C LLSDM+AFKAANP ++DF+RW+SP DW E TD+ + K Sbjct: 442 PMRIKSAVPDSLVCRLSCLLATCHAHLGSVEGMAQVWAAFTRQLRLLWDNSLMVPGISAG-FPDTRTCLLHQKLQMLNVCVERRVQREANSKRKSEGMVGKASSEEEEDEDDDEGEFFDCDDLTAGAGSPTKAVLSLKPEGRLRRLN-NERLLEEPDEYLYIPDTQEPVPKTEDQLQDDAEVMLKLGP-GSGLTTQMMCTSLLSDMEAFKAANPRGIMEDFIRWYSPKDWEEVTDELGQVK 679 HSP 2 Score: 22.7126 bits (47), Expect = 2.187e-23 Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 1 Query: 715 MKGQLSRRIQKEGNWGGELWE 777 +K QLS R+ EGN ++WE Sbjct: 678 VKHQLSIRMTTEGNTWQKVWE 698
BLAST of EY736159 vs. ExPASy Swiss-Prot
Match: RB3GP_DANRE (Rab3 GTPase-activating protein catalytic subunit OS=Danio rerio GN=rab3gap1 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.794e-22 Identity = 72/229 (31.44%), Postives = 107/229 (46.72%), Query Frame = 3 Query: 96 LRKMALFWCKVVAELRRLWSEEQHIPGIPLDETPDLNSCLLYQQLQVINCCLSRKRRHTIATES------------------------LESVMRQCSSNVEDSSPCMDTMPETPVLYARVCTGELVIRL---GAYQPTDL-IMLETGEPVYSPISQEGPLLTEDLIKETEELVLRTGSVGAGCXQ--------LLSDMQAFKAANPXCSLKDFVRWHSPPDWTETDQSD 674 +R +A W + V E+R W I G+ PDL CLL+Q+LQ++NCC+ RK+ +S E+ + S + + + +T + E R G QP +L T EP+Y PI+QE +TEDL++E E++ + G+ G LLSDM++FKAANP C+L DFVRW+SP D+ E +D Sbjct: 475 VRAVAHLWQEFVLEMRYRWENNCLIYGLA-SGPPDLRCCLLHQKLQMLNCCIERKKARDDGKKSSSSDGARDRSRGAPEGAGPEGAGPAEAAGKSWDSWSDSEDEFFECVSDTEEMKEDKEEAENRSRSKPEGRLQPHGTHTLLNTQEPLYIPITQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCTLLDFVRWYSPRDYVEEQVTD 702 HSP 2 Score: 25.0238 bits (53), Expect = 1.794e-22 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 715 MKGQLSRRIQKEGNWGGELWETS 783 ++G+LS R++ GN E WET+ Sbjct: 709 VRGELSARMKIPGNMWVEAWETA 731
BLAST of EY736159 vs. ExPASy Swiss-Prot
Match: RB3GP_HUMAN (Rab3 GTPase-activating protein catalytic subunit OS=Homo sapiens GN=RAB3GAP1 PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 5.069e-18 Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 3 Query: 417 YQPTDLIMLETGEPVYSPISQEGPLLTEDLIKETEELVLRTGSVGAGCXQ--------LLSDMQAFKAANPXCSLKDFVRWHSPPDWTETDQSDE 677 YQ L +L GEP+Y P++QE +TEDL++E E++ + G+ G LLSDM++FKAANP CSL+DFVRW+SP D+ E + DE Sbjct: 621 YQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRDYIEEEVIDE 715 HSP 2 Score: 24.2534 bits (51), Expect = 5.069e-18 Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 1 Query: 715 MKGQLSRRIQKEGNWGGELWETS 783 +KG+LS R++ N E WET+ Sbjct: 721 LKGELSARMKIPSNMWVEAWETA 743
BLAST of EY736159 vs. ExPASy Swiss-Prot
Match: RB3GP_MOUSE (Rab3 GTPase-activating protein catalytic subunit OS=Mus musculus GN=Rab3gap1 PE=2 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 4.135e-17 Identity = 42/95 (44.21%), Postives = 61/95 (64.21%), Query Frame = 3 Query: 417 YQPTDLIMLETGEPVYSPISQEGPLLTEDLIKETEELVLRTGSVGAGCXQ--------LLSDMQAFKAANPXCSLKDFVRWHSPPDWTETDQSDE 677 +Q L +L GEP+Y P++QE +TEDL++E E++ + G+ G LLSDM++FKAANP C L+DFVRW+SP D+ E + +DE Sbjct: 621 HQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCFLEDFVRWYSPRDYIEEEVTDE 715 HSP 2 Score: 24.2534 bits (51), Expect = 4.135e-17 Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 1 Query: 715 MKGQLSRRIQKEGNWGGELWETS 783 +KG+LS R++ N E WET+ Sbjct: 721 LKGELSARMKIPSNMWVEAWETA 743 The following BLAST results are available for this feature:
BLAST of EY736159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736159 ID=EY736159; Name=EY736159; organism=Citrus sinensis; type=EST; length=858bpback to top |