EY736015

Overview
NameEY736015
Unique NameEY736015
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY736015 vs. ExPASy Swiss-Prot
Match: LE14B_PRUAR (LEC14B homolog OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.581e-19
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 1 
Query:  535 THYSGRGRFSPADCCHMLSRYLPVNGAWPVDHRSSQAYV 651
            +++SGRGRFS AD CH+LSRYLP+NG W VD  +S AYV
Sbjct:   77 SNHSGRGRFSSADGCHVLSRYLPINGPWGVDQSTSPAYV 115

HSP 2 Score: 55.0694 bits (131), Expect = 4.581e-19
Identity = 30/73 (41.10%), Postives = 46/73 (63.01%), Query Frame = 2 
Query:  317 SRFEIESEFYDAADTVNQASNSRSKFKKPLSALDHEIAQLTKLKSEPKEHFSKEVPGKRHLPVSTVKMLAGRE 535
            +RF  ++   D+ + V  + +S+    +  +  DHEIAQLTK +S P +  S+++PGK  L VST+KML GRE
Sbjct:    5 TRFGKDNSACDSGNAVEGSGSSKGP-NEVSNDFDHEIAQLTKHRSRPHQLLSQDMPGKSRLLVSTMKMLVGRE 76
[Close]
BLAST of EY736015 vs. ExPASy Swiss-Prot
Match: LE14B_LITER (LEC14B protein OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.155e-13
Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 2 
Query:  302 MGYAMSRFEIESEFYDAADTVNQASNSRSKFKKPLSALDHEIAQLTKLKSEPKEHFSKEVPGKRHLPVSTVKMLAGRERIIQEEG-----------GSHLQIVVICLVD 595
            MGYAMSRFE +     ++ + ++ S+  S   KP+  LDHEIAQLT+L+S P E+ S+++  KR LP+ST+KMLAGRE  +   G             HL +   C+VD
Sbjct:    1 MGYAMSRFETDVSVIFSSSSDSETSHD-SLINKPVKNLDHEIAQLTRLRSAPHENLSRDLLVKRVLPLSTMKMLAGREANVSGRGRFSSADCCHVVSRHLPVNDPCVVD 108
The following BLAST results are available for this feature:
BLAST of EY736015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
LE14B_PRUAR4.581e-1966.67LEC14B homolog OS=Prunus armeniaca PE=2 SV=1[more]
LE14B_LITER1.155e-1342.20LEC14B protein OS=Lithospermum erythrorhizon PE=2 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-008-H12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736015 ID=EY736015; Name=EY736015; organism=Citrus sinensis; type=EST; length=866bp
CACGCGTCCGCGGACGCGTGGGTTATGATACAAATTACGATTCTTGTCTT
GTGAGGTTATCGTGTTTCTTTGATAACTGAAACTTGTGATTCGTCTTTTC
AAACGGCTGCTGATTCTTCTATTTTCAATTGTATGGTTCTACATAAGAAG
CTTCTTGGATGAAGAGGCTCTAAGAAGCTGTATAGGTGTGATCTCAAGGC
TCAACTTAGTTGAAAATGCTTAAGAAAAAGTAACATTGCTCGGTGATTCT
GATTTCTGAGTTATAATGTTCGTAACAGCAAGTGGAGTTGACTTTGACGA
AATGGGATATGCCATGAGTAGATTCGAGATAGAATCTGAATTCTATGATG
CTGCCGATACTGTCAATCAAGCTAGTAATAGTCGTAGCAAATTCAAGAAA
CCCTTGAGTGCTTTAGACCATGAAATTGCCCAGCTCACGAAGCTGAAATC
GGAACCCAAGGAGCATTTTAGCAAAGAAGTACCTGGGAAGCGGCACTTGC
CTGTTTCCACTGTGAAAATGTTGGCTGGTAGGGAACGCATTATTCAGGAA
GAGGGAGGTTCTCACCTGCAGATTGTTGTCATATGCTTAGTAGATATTTG
CCTGTTAATGGGGCCTGGCCTGTGGACCACAGGAGTAGCCAGGCATATGT
TCTCTCCGGTCGCGGGTGGATGGTCGTCATTTGTTGCGCGGAGGCGAGCT
AGTCAATTAAACTCCGGCAGGTGGACAGATGTTGCAGGGACCGACAGAAC
TGCGGGCACAAGGTTGGTGCGCCAGTCCGCACACATGAGGTCCCGCGGAG
CGGGCCGGGCGGGCGCGGAAGAAGTGCCCCGGAGGGCCACGGGGGAGAGC
GCGGGCGGCGGGAGGG
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