EY735846
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735846 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 1.415e-80 Identity = 145/212 (68.40%), Postives = 165/212 (77.83%), Query Frame = 2 Query: 131 SRFFGTRIHGAVVKQRSGKFQARXXXXXXXXXXXXXXRPTR----DSDRLVWFPGATPPEWLDGTMVGDRGFDPLGLGKPTEYLQYDFDSLDQNLAKNDVGELLGVITDSGELQPTPLQPYTEVFGLQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGXVELVEGSSYLGQPLPFSLTTLIWIEVIVIGYIXYQRNAEPDPRKNNTP 754 S FG RI + +G+ QAR + +R D DRLVWFPGA PPEWLDG+M+GDRGFDP GLGKP EYLQYDFD LDQNLAKN G+++G+I +S E++PTP QPYTEVFG+QRFRECELIHGRWAMLGTLGAIAVEALTG+AWQDAG VELVEGSSYLGQPLPFSLTTLIWIEV+V+GYI +QRN+E DP K P Sbjct: 10 SGIFGIRIQDP--RPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYP 219
BLAST of EY735846 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 7.282e-69 Identity = 126/208 (60.58%), Postives = 153/208 (73.56%), Query Frame = 2 Query: 131 SRFFGTRIHGAVVKQRSGKFQARXXXXXXXXXXXXXXRPTRDSDRLVWFPGATPPEWLDGTMVGDRGFDPLGLGKPTEYLQYDFDSLDQNLAKNDVGELLGVITDSGELQPTPLQPYTEVFGLQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGXVELVEGSSYLGQPLPFSLTTLIWIEVIVIGYIXYQRNAEPDPRKNNTP 754 S GTR+ + SG+F A + T +DR +W+PGA P+WLDG++VGD GFDP GLGKP EYLQ+D DSLDQNLAKN G+++G T++ + + TP QPY+EVFG+QRFRECELIHGRWAML TLGA++VE LTGV WQDAG VELV+GSSYLGQPLPFS++TLIWIEV+VIGYI +QRNAE D K P Sbjct: 12 SSIMGTRVAPGI-HPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYP 218
BLAST of EY735846 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.373e-67 Identity = 122/166 (73.49%), Postives = 139/166 (83.73%), Query Frame = 2 Query: 257 SDRLVWFPGATPPEWLDGTMVGDRGFDPLGLGKPTEYLQYDFDSLDQNLAKNDVGELLGVITDSGELQPTPLQPYTEVFGLQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGXVELVEGSSYLGQPLPFSLTTLIWIEVIVIGYIXYQRNAEPDPRKNNTP 754 SDR +WFPGA PE+LDG++VGD GFDP GLGKP EYLQ+D DSLDQNLAKN GE++G T++ + + TP QPY+EVFGLQRFRECELIHGRWAML TLGAI VE LTGV WQDAG VELV+GSSYLGQPLPFS++TLIWIEV+VIGYI +QRNAE D K P Sbjct: 50 SDRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYP 215
BLAST of EY735846 vs. ExPASy Swiss-Prot
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 186.037 bits (471), Expect = 2.279e-46 Identity = 91/164 (55.49%), Postives = 113/164 (68.90%), Query Frame = 2 Query: 269 VWFPGATPPEWLDGTMVGDRGFDPLGLGKPTEYLQYDFDSLDQNLAKNDVGELLGVI--TDSGELQPTPLQPYTEVFGLQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGXVELVEGSSYLGQPLPFSLTTLIWIEVIVIGYIXYQRNAEPDPRKNNTP 754 +W P T PEWLDG++ GDRGFDPLGL KP+E++ D DQN AKN+ G + ++ T L PY+EVFGL RFRECELIHGRWAML LGA+ EA TGV+W +AG VEL +G+SY G LPFS+T LIWIEVI++G + RN+E +P K P Sbjct: 52 LWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEAGKVEL-DGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSETNPEKRCYP 214
BLAST of EY735846 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.544e-13 Identity = 46/142 (32.39%), Postives = 65/142 (45.77%), Query Frame = 2 Query: 293 PEWLDGTMVGDRGFDPLGLGKPTEYLQYDFDSLDQNLAKNDVGELLGVITDSGELQPTPLQPYTEVFGLQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGXVELVEGSSYLGQPLPFSLTTLIWIEVIVIGYIXYQR 718 PEWLDG++ GD GFDPLGLGK +L++ +RE ELIHGRWAML LG +A TG+ W +AG + G PFS TL+ +++++G++ +R Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDPAFLKW-------------------------------------------YREAELIHGRWAMLAVLGIFVGQAWTGIPWFEAG--------ADPGAVAPFSFGTLLGTQLLLMGWVESKR 163
BLAST of EY735846 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.649e-12 Identity = 45/142 (31.69%), Postives = 64/142 (45.07%), Query Frame = 2 Query: 293 PEWLDGTMVGDRGFDPLGLGKPTEYLQYDFDSLDQNLAKNDVGELLGVITDSGELQPTPLQPYTEVFGLQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGXVELVEGSSYLGQPLPFSLTTLIWIEVIVIGYIXYQR 718 PEWLDG++ GD GFDPLGLGK +L++ +RE ELIHGRWAM LG +A +G+ W +AG + G PFS TL+ ++I++G++ +R Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKW-------------------------------------------YREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAG--------ADPGAIAPFSFGTLLGTQLILMGWVESKR 158
BLAST of EY735846 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.069e-11 Identity = 43/142 (30.28%), Postives = 64/142 (45.07%), Query Frame = 2 Query: 293 PEWLDGTMVGDRGFDPLGLGKPTEYLQYDFDSLDQNLAKNDVGELLGVITDSGELQPTPLQPYTEVFGLQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGXVELVEGSSYLGQPLPFSLTTLIWIEVIVIGYIXYQR 718 PEWLDG++ GD GFDPLGLGK +L++ +RE ELIHGRWAM LG +A +G+ W +AG + G PFS +L+ +++++G++ +R Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKW-------------------------------------------YREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAG--------ADPGAIAPFSFGSLLGTQLLLMGWVESKR 158 The following BLAST results are available for this feature:
BLAST of EY735846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735846 ID=EY735846; Name=EY735846; organism=Citrus sinensis; type=EST; length=859bpback to top |