EY735836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PR19B_ARATH (Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana GN=PRP19B PE=1 SV=3) HSP 1 Score: 335.88 bits (860), Expect = 4.804e-95 Identity = 163/222 (73.42%), Postives = 188/222 (84.68%), Query Frame = 2 Query: 14 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVATVTADWNCIKTFPDLSGTGKATCVKFG 679 + DL LT SADKTVR+W+ DGNY C +TL DH+AEV+AVTVH TNKYFV+ASLD TWCFYDLSSG CL QVSD D + YT+AAFHPDGLILGTGTS+++VKIWDVKSQANVAKFDGH G VTAISFSENGY+LATAA DGV+LWDLRKL+NF+SF S+D+ NSV+FD SGSYL +A++DI+VYQ A+V A+WN IKT PDLSGTGKATCVKFG Sbjct: 275 DSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSD---DSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWDLRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTLPDLSGTGKATCVKFG 489 HSP 2 Score: 32.7278 bits (73), Expect = 4.804e-95 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 678 GPHRYYLAVGSMDRHLLVFGLP 743 G Y+AVGSMDR+L +FGLP Sbjct: 489 GSDAQYVAVGSMDRNLRIFGLP 510
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PR19A_ARATH (Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana GN=PRP19A PE=1 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 6.859e-94 Identity = 161/220 (73.18%), Postives = 190/220 (86.36%), Query Frame = 2 Query: 20 DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVATVTADWNCIKTFPDLSGTGKATCVKFG 679 DL LT S+DKTVR+W SEDGNY +HTLKDH+AEV+AVTVHATNKYFV+ASLD+TWCFYDLSSG+CL QV+DA + YT+AAFHPDGLILGTGT++++VKIWDVKSQANVAKF GH G +T+ISFSENGY+LATAA DGV+LWDLRKLKNFR+F+ D+ NSV+FDHSGSYL +A++DIRV+Q A+V A+WN IKT PDLSGTGKAT VKFG Sbjct: 277 DLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASEND--VNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGVRLWDLRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLPDLSGTGKATSVKFG 490 HSP 2 Score: 32.3426 bits (72), Expect = 6.859e-94 Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3 Query: 693 YLAVGSMDRHLLVFGLP 743 Y+AVGSMDR+L +FGLP Sbjct: 495 YIAVGSMDRNLRIFGLP 511
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PRP19_HUMAN (Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.639e-44 Identity = 99/221 (44.80%), Postives = 135/221 (61.09%), Query Frame = 2 Query: 20 DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVATVTADWNCIKTFPDLSGTGKATCVKFG 679 DL + S D T+R+W N C ++ H + V +++HAT Y +++S D W F D+ +G LT+V+D T G T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGYYLATAA D VKLWDLRKLKNF++ + D+ S+ FD SG+YLA+ D+++Y + W I F + SG T V FG Sbjct: 277 DLVFSASPDATIRIWSVP---NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDE-TSGC--SLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQ-LDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEILHFTEHSGL--TTGVAFG 484
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PRP19_CHICK (Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19 PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.639e-44 Identity = 97/221 (43.89%), Postives = 133/221 (60.18%), Query Frame = 2 Query: 20 DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVATVTADWNCIKTFPDLSGTGKATCVKFG 679 DL + S D T+R+W N C ++ H V +++HAT Y +++S D W F D+ +G LT+V+D + T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGYYLATAA D VKLWDLRKLKNF++ + D+ S+ FD SG+YLA+ D+++Y + W I F + SG T V FG Sbjct: 278 DLVFSASPDATIRIWSVP---NASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGC---ALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQ-LDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEILHFTEHSGL--TTGVAFG 485
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PRP19_RAT (Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 1.059e-43 Identity = 98/221 (44.34%), Postives = 135/221 (61.09%), Query Frame = 2 Query: 20 DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVATVTADWNCIKTFPDLSGTGKATCVKFG 679 +L + S D T+R+W N C ++ H + V +++HAT Y +++S D W F D+ +G LT+V+D T G T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGYYLATAA D VKLWDLRKLKNF++ + D+ S+ FD SG+YLA+ D+++Y + W I F + SG T V FG Sbjct: 277 ELVFSASPDATIRIWSVP---NTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDE-TSGC--SLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQ-LDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEILHFTEHSGL--TTGVAFG 484
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PRP19_MOUSE (Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.059e-43 Identity = 98/221 (44.34%), Postives = 135/221 (61.09%), Query Frame = 2 Query: 20 DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVATVTADWNCIKTFPDLSGTGKATCVKFG 679 +L + S D T+R+W N C ++ H + V +++HAT Y +++S D W F D+ +G LT+V+D T G T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGYYLATAA D VKLWDLRKLKNF++ + D+ S+ FD SG+YLA+ D+++Y + W I F + SG T V FG Sbjct: 277 ELVFSASPDATIRIWSVP---NTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDE-TSGC--SLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQ-LDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEILHFTEHSGL--TTGVAFG 484
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PRP19_BOVIN (Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.059e-43 Identity = 98/221 (44.34%), Postives = 135/221 (61.09%), Query Frame = 2 Query: 20 DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVATVTADWNCIKTFPDLSGTGKATCVKFG 679 +L + S D T+R+W N C ++ H + V +++HAT Y +++S D W F D+ +G LT+V+D T G T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGYYLATAA D VKLWDLRKLKNF++ + D+ S+ FD SG+YLA+ D+++Y + W I F + SG T V FG Sbjct: 277 ELVFSASPDATIRIWSVP---NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDE-TSGC--SLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQ-LDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEILHFTEHSGL--TTGVAFG 484
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PRP19_CAEEL (Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans GN=T10F2.4 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.582e-39 Identity = 94/227 (41.41%), Postives = 138/227 (60.79%), Query Frame = 2 Query: 29 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVATVTADWNCIKTFPDLSGTGKATCVKFG--PPSLLPC 700 ++ SAD +RVW ++ + K + H A V ++++A+ Y ++AS D+ W F D+ SG L +VS G S FHPDGLI GTG ++A+VKIWD+K+Q A F GH AV +I+FSENGYYLAT + DG VKLWDLRKLKN ++F +++ + P NS+ FD +G++L + ++V V + W+ + + D S G T V+FG SL+ C Sbjct: 267 ISASADSHIRVWSATDSSS---KAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVE--PGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKLKNLKTF-ANEEKQPINSLSFDMTGTFLGIGGQKVQVLHVKS----WSEVVSLSDHS--GPVTGVRFGENARSLVTC 481
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PRP19_DICDI (Pre-mRNA-processing factor 19 homolog OS=Dictyostelium discoideum GN=prp19 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.956e-26 Identity = 73/200 (36.50%), Postives = 106/200 (53.00%), Query Frame = 2 Query: 11 AEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKD-----HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPT------NSVDFDHSGSYLAVASAD 577 A + ++ +D +RV +G E + K H A V +++H Y +++SLD + YD+ +G LT + + YTS AFHPDG+ GT +VKI+D+KS+ N F G AV ISFSENGYYL A ++ VKL+DLRK + S D +T T S++FD+S YL VAS++ Sbjct: 269 APNNTIVSAGSDAVIRVVKGGESPSKKTYTQYKSTYQFAHKASVTDISLHVLGDYIISSSLDKSLNMYDIVNGTHLTSFGQS----QQLCYTSVAFHPDGMFFAAGTQNGVVKIFDLKSKVNSFNFQGLSTAVNCISFSENGYYLTAADNNTVKLFDLRKA---ATKNSPDIQTITLDNQQIKSINFDYSSQYLGVASSN 461
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: YIDC_SCHPO (Uncharacterized WD repeat-containing protein C227.12 OS=Schizosaccharomyces pombe GN=SPAC227.12 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.757e-22 Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = 2 Query: 5 ASAEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT-AAHDGVKLWDLRKL 478 A +E TG+AD TV +W+ S+ L+ H A V V H + Y V+AS D TW +D+ +G+ L +G EG S A PDG ++ +G ++A+ +IWD++S ++ D H+ + A+++S NGY LAT +A D VK+WDLRK+ Sbjct: 231 ADSEQLTLATGAADNTVCLWKASQSTPL---LRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLM-----QEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKV 381 The following BLAST results are available for this feature:
BLAST of EY735836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735836 ID=EY735836; Name=EY735836; organism=Citrus sinensis; type=EST; length=860bpback to top |