EY735544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 3.409e-59 Identity = 107/158 (67.72%), Postives = 131/158 (82.91%), Query Frame = 3 Query: 96 SMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 ++ISS V T NRAS AQA++VAPFTGLKSS+ P TKKTNNDITSIASNGGRV+CM+VWPP G KKFETLSYLPPL++E L KE+ YL+R GWIPCLEFELEKG+V RE+H SPGYYDGRY TM +LP++G TD++ VLK++ D E +F+R++ Sbjct: 2 ALISSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRII 159
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 7.595e-59 Identity = 106/156 (67.95%), Postives = 125/156 (80.13%), Query Frame = 3 Query: 102 ISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 ISS+ +AT NR + QAS+ APFTGLKS+ A P TKK NND +S+ SNGGRV CMKVWPP GLKK+ETLSYLPPLSDEAL KEI YL+R+ WIPCLEFELE G+V REHH SPGYYDGRY TM KLPM+GCTD+ V+K+VG+ E F+R++ Sbjct: 4 ISSSAIATVNRTTSTQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVI 159
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.769e-58 Identity = 109/166 (65.66%), Postives = 136/166 (81.93%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHE 584 MASSMISS TVAT +RA+ AQA+MVAPFTGLKS++A PAT+K+NNDITS+ASNGGRV CMKVWPP GL+KFETLSYLPPLS E+L K+I YL+ GWIPCLEFELE +V RE++ SPGYYDGRY M KLPM+GCTDAT VL ++ + + +R++ ++++ Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNK 166
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.923e-58 Identity = 113/163 (69.33%), Postives = 133/163 (81.60%), Query Frame = 3 Query: 87 MASSMISSTTVAT--ANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASSMISS TVAT A+R + AQA MVAPFTGLKSSSA P T+K+N DITSIASNGGRV CM+VWPP GLKKFETLSYLPPLS E+L KE+ YLLR W+PCLEFELE G+V RE+H SPGYYDGRY TM KLPM+GCTD++ VLK++ + +F+R++ Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRII 162
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.923e-58 Identity = 111/166 (66.87%), Postives = 132/166 (79.52%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHE 584 MA SMISS TVA +RAS AQ+SMVAPFT LKS+SA P T+KTNNDITSIASNGGRV CM+VWPP GLKKFETLSYLPPLS E L KE+ YLLR IPCLEFELE G+V REH+ SPGYYDGRY TM KLPM+GC D++ VLK++ + F+R++ ++++ Sbjct: 1 MACSMISSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNK 166
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.871e-57 Identity = 112/163 (68.71%), Postives = 132/163 (80.98%), Query Frame = 3 Query: 87 MASSMISSTTVAT--ANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASSMISS TVAT A+R + AQA MVAPF GLKSSSA P T+K+N DITSIASNGGRV CM+VWPP GLKKFETLSYLPPLS E+L KE+ YLLR W+PCLEFELE G+V RE+H SPGYYDGRY TM KLPM+GCTD++ VLK++ + +F+R++ Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRII 162
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 9.284e-57 Identity = 106/149 (71.14%), Postives = 122/149 (81.88%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDV 533 MASSM+S+ VA NRAS AQASMVAPFTGLKS+SA P T+KT DITSIASNGGRV CM+VWPP G K +ETLSYLPPL+ E L KE+ YLLR GW+PCLEFELE G V RE+H SPGYYDGRY TM KLPM+GCTDA VL+++ ++ Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEM 149
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 2.701e-56 Identity = 105/149 (70.47%), Postives = 121/149 (81.21%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDV 533 MASSM+S+ TVA+ NR S AQA+MVAPFTGLKS+ P T+KTN+DITSI SNGG+V CMKVWP G+KKFETLSYLPPL+ E L E+ YLLRSGWIPCLEFELE G V REH PGYYDGRY TM KLPM+GCTDA VLK++ ++ Sbjct: 1 MASSMLSTATVASINRVSPAQATMVAPFTGLKSTPVFPTTRKTNSDITSITSNGGKVQCMKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPMFGCTDAAQVLKELDEL 149
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS0_SOLTU (Ribulose bisphosphate carboxylase small chain C, chloroplastic OS=Solanum tuberosum GN=RBCS-C PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 2.701e-56 Identity = 106/162 (65.43%), Postives = 131/162 (80.86%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNN-DITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS++SS VAT R+++AQASMVAPFTGLKS+++ P TKK NN DITS+ASNGGRV CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+V REH+ SPGYYDGRY TM KLPM+GCTD T VL +V + N ++R++ Sbjct: 1 MASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYPQAWIRII 160
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 6.018e-56 Identity = 106/162 (65.43%), Postives = 131/162 (80.86%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNN-DITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS++SS VAT R+++AQASMVAPFTGLKS+++ P TKK NN DITS+ASNGGRV CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+V RE+H SPGYYDGRY TM KLPM+GCTDAT VL +V + ++R++ Sbjct: 1 MASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWIRII 160 The following BLAST results are available for this feature:
BLAST of EY735544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735544 ID=EY735544; Name=EY735544; organism=Citrus sinensis; type=EST; length=919bpback to top |