EY756359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RK6_ARATH (50S ribosomal protein L6, chloroplastic OS=Arabidopsis thaliana GN=RPL6 PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.532e-46 Identity = 87/112 (77.68%), Postives = 102/112 (91.07%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSREEE 424 RTLTDNMVVGVSKGFEKKL +VGVGYRA ++G+ LVL+LGFSHPV+M IPD +KV VEENTRITVSGYDKS IGQFAA++RKWRPPEPYKGKGVKY DE++RRK GK+ +++ Sbjct: 112 RTLTDNMVVGVSKGFEKKLILVGVGYRATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVSGYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDEIVRRKEGKAGKKK 223
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_MAGSM (50S ribosomal protein L6 OS=Magnetococcus sp. (strain MC-1) GN=rplF PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.102e-36 Identity = 70/110 (63.64%), Postives = 87/110 (79.09%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 +RTL DNMVVGVS+GF K+L++ GVGYRAA++G+ L LSLGFSHPV +P+G++ VE+NT ITV GYDK +GQ A IR WRPPEPYKGKGV+YV E + RK GK + Sbjct: 68 SRTLLDNMVVGVSQGFSKQLEIQGVGYRAAVKGRTLELSLGFSHPVNYELPNGLEATVEKNTLITVKGYDKEVLGQACAEIRSWRPPEPYKGKGVRYVGEFVLRKEGKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CLOD6 (50S ribosomal protein L6 OS=Clostridium difficile (strain 630) GN=rplF PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.626e-35 Identity = 70/109 (64.22%), Postives = 83/109 (76.15%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TRTL DNMVVGV+ GFEKKL++ GVGYRA +G+ LV++LGFSHPV M P+GI V T + V G DK +G +AA IR WR PEPYKGKG+KYVDEVIRRK GK+ Sbjct: 69 TRTLLDNMVVGVNTGFEKKLELKGVGYRAQKQGKKLVMNLGFSHPVEMEDPEGITVEAPNQTELIVKGIDKQLVGNYAAKIRAWRKPEPYKGKGIKYVDEVIRRKEGKT 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PARUW (50S ribosomal protein L6 OS=Protochlamydia amoebophila (strain UWE25) GN=rplF PE=3 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 3.430e-35 Identity = 65/108 (60.19%), Postives = 88/108 (81.48%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 RTL NMVVG ++GFEKKL+M+GVGYRAA++G +L L LGFSHP ++ IP G+ V V++NT IT+SG+DK +GQFAA++R RPPEPY+GKG++Y E +R+K GK+ Sbjct: 69 RTLIHNMVVGTTEGFEKKLEMIGVGYRAAVQGDLLDLQLGFSHPCKLPIPKGLAVKVDKNTLITISGFDKHLVGQFAATVRSQRPPEPYQGKGIRYAGEFVRKKAGKA 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_AKKM8 (50S ribosomal protein L6 OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=rplF PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.641e-35 Identity = 67/108 (62.04%), Postives = 88/108 (81.48%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 R+L +NMV+GVS+GF K L++VGVG+RAA++G +L L+LG SHP+ IP+G+KV V ENT++TV G DK +GQFAA +R + PPEPYKGKGV++V EVIRRK GKS Sbjct: 69 RSLLNNMVIGVSEGFVKNLEIVGVGFRAAVKGNILDLNLGKSHPINQVIPEGLKVTVTENTKVTVEGIDKQVVGQFAAEVRAYYPPEPYKGKGVRFVGEVIRRKEGKS 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_NITOC (50S ribosomal protein L6 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=rplF PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.303e-34 Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR L +NMV GVS+GFE++LQ+VGVGYRA L+G+ LVLSLG+SHPV T P+G+ + V T I V GYDK +GQ AA+IR++RPPEPYKGKGV+Y DEV+ RK K + Sbjct: 69 TRALINNMVQGVSQGFERRLQLVGVGYRAQLQGRKLVLSLGYSHPVEFTAPEGLTIEVPSPTEIIVKGYDKQQVGQAAANIRRFRPPEPYKGKGVRYADEVVVRKEAKKK 178
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_MYCPN (50S ribosomal protein L6 OS=Mycoplasma pneumoniae GN=rplF PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.792e-34 Identity = 66/108 (61.11%), Postives = 83/108 (76.85%), Query Frame = 2 Query: 95 LTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSRE 418 L N ++GV++GFEKKL++VGVGYRA +EG+ L L LG+SHP++ IP G+ V VE+NT IT+SG K +GQFA +RKWR PEPYKGKGV Y DEVI RK GK+ E Sbjct: 74 LITNAIIGVTQGFEKKLRLVGVGYRANVEGETLNLQLGYSHPIKEKIPKGLTVKVEKNTEITISGISKELVGQFATEVRKWRKPEPYKGKGVLYFDEVIVRKAGKTAE 181
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_ACHLI (50S ribosomal protein L6 OS=Acholeplasma laidlawii (strain PG-8A) GN=rplF PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.792e-34 Identity = 68/109 (62.39%), Postives = 85/109 (77.98%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR L NMV GVS+GF KKL++ GVGYRA L+G LVL LGFSH + M +P+GI ++V +NT ITV+G DK+ +GQFAA IRK R PEPYKGKG++YVDE + RK GK+ Sbjct: 69 TRALLFNMVHGVSEGFSKKLEIKGVGYRAQLQGNTLVLQLGFSHNIEMPLPEGISLDVPKNTEITVNGIDKAVVGQFAAEIRKHRKPEPYKGKGIRYVDEYVARKAGKT 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_ALKMQ (50S ribosomal protein L6 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rplF PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.952e-34 Identity = 66/109 (60.55%), Postives = 86/109 (78.90%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 +RTL NMV GV+KG+EKKL++VGVGYRA ++G+ LVLSLGFSHPV + P+G+ + V T++TV G DK +G FAA IR++R PEPYKGKGV+Y EV+RRK GK+ Sbjct: 69 SRTLVANMVEGVTKGYEKKLELVGVGYRATMQGKKLVLSLGFSHPVEIDQPEGLTIEVPSQTQVTVKGIDKQQVGNFAAKIREYRKPEPYKGKGVRYAGEVVRRKEGKT 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PELPD (50S ribosomal protein L6 OS=Pelobacter propionicus (strain DSM 2379) GN=rplF PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.103e-33 Identity = 70/119 (58.82%), Postives = 88/119 (73.95%), Query Frame = 2 Query: 62 SSIASSFH--TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 S A S H TRTL NMV GV+KGF+K L++ GVGYRA ++G LVLSLG+SHPV TIP G+ + V++ T++ V G+DK +G+ AA IR +RPPEPYKGKGVKY DE I RK GK+ Sbjct: 58 SGTARSAHGLTRTLVSNMVNGVTKGFQKSLEINGVGYRAEVKGSELVLSLGYSHPVVFTIPAGVTIEVDKLTKVVVKGFDKELVGETAAKIRSFRPPEPYKGKGVKYADETILRKAGKT 176 The following BLAST results are available for this feature:
BLAST of EY756359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756359 ID=EY756359; Name=EY756359; organism=Citrus sinensis; type=EST; length=584bpback to top |