EY756238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756238 vs. ExPASy Swiss-Prot
Match: PSBW_SPIOL (Photosystem II reaction center W protein, chloroplastic OS=Spinacia oleracea GN=psbW PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.372e-18 Identity = 54/125 (43.20%), Postives = 70/125 (56.00%), Query Frame = 3 Query: 45 MASISSTNFPALLPRSGFVPKGLT--HASPVCGLPAMATTRGRVRCSLDEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIY 413 MA+I++++ +L+ R+ V +SP+ GLP+M T R +V CS++ K VDERM+TEGTGLPFGLSNN LGWILFGVFGLIWALYF+Y Sbjct: 1 MATITASSSASLVARASLVHNSRVGVSSSPILGLPSM-TKRSKVTCSIENKPSTTETTTTTNKSMGASLLAAAAAATISNPAMAL-VDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVY 123
BLAST of EY756238 vs. ExPASy Swiss-Prot
Match: PSBW_ARATH (Photosystem II reaction center W protein, chloroplastic OS=Arabidopsis thaliana GN=PSBW PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.588e-17 Identity = 53/123 (43.09%), Postives = 63/123 (51.22%), Query Frame = 3 Query: 48 ASISSTNFPALLPRSGFVPKGLTHASPVCGLPAMATTRGRVRCSLDEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIYT 416 AS S PALL + + ++PV GLP M +G VRCS++ K VDERM+TEGTGLPFGLSNN LGWILFGVFGLIW +F+YT Sbjct: 8 ASTVSAARPALL-----LKPTVAISAPVLGLPPMGKKKGGVRCSMETKQGNVSVMGAGVSAAATAALTAVMSNPAMAL-----VDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYT 120
BLAST of EY756238 vs. ExPASy Swiss-Prot
Match: PSBW_ORYSJ (Photosystem II reaction center W protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PSBW PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 3 Query: 297 VDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIYT 416 VDERM+TEGTGL GLSNN LGWIL GVFGLIW+LY IYT Sbjct: 71 VDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYT 110 The following BLAST results are available for this feature:
BLAST of EY756238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756238 ID=EY756238; Name=EY756238; organism=Citrus sinensis; type=EST; length=596bpback to top |