FE659327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 1.526e-71 Identity = 127/162 (78.40%), Postives = 147/162 (90.74%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREW 489 GNIFIKNLD+SIDHKALHDTFSSFGNI+SCK+A D SGQSKG+GFVQ+ N+ESAQ AI+KLNGML+NDKQV+VG FLR+QER++ A KTKF NV+VKNL ESTTD+DLK FGEYG ITSAVVM+DG+GKSK FGFVNFEN DDAA+AV++LNG KFDD+EW Sbjct: 124 GNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEW 285 HSP 2 Score: 138.272 bits (347), Expect = 1.823e-32 Identity = 72/171 (42.11%), Postives = 104/171 (60.82%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET------------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483 N+++KNL +S L + F +G I S + DG G+SKGFGFV FEN + A A++ LNG +DK+ +VG +K ERET A K + +N++VKNLD S +DE LK+IF +GT+TS+ VMRD +G SK GFV F ++A +A+ L+GK + + Sbjct: 216 NVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESK 386 HSP 3 Score: 73.9442 bits (180), Expect = 4.223e-13 Identity = 37/95 (38.95%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNV 285 + N+++KNLD SI + L + FS FG + S K+ D +G SKG GFV F E A A+ +L+G +I K ++V RK++R V ++ +F+ V Sbjct: 317 SSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRR-VRLQAQFSQV 410
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.214e-52 Identity = 102/161 (63.35%), Postives = 127/161 (78.88%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE--RETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDD 480 GNIFIKNLD SID+KAL +TFSSFG ILSCK+A D +G+SKG+GFVQFE +ESAQ AIDKLNGML+NDKQVFVGHF+R+QE R+ +F NV+VKNL + +++L+K FG++G I+SAVVMRD G S+CFGFVNFE + AA AV+ +NG D Sbjct: 136 GNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGD 296 HSP 2 Score: 129.798 bits (325), Expect = 6.484e-30 Identity = 68/167 (40.72%), Postives = 101/167 (60.48%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N+++KNL K I L TF FG I S + D SG S+ FGFV FE E+A +A++K+NG+ + D ++VG +K ERE ++ KF N+++KNLD+S DE LK++F EYG +TS+ VM + G S+ FGFV + N ++A +A+ +NGK Sbjct: 230 NVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREE-ELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGK 395 HSP 3 Score: 90.5077 bits (223), Expect = 4.360e-18 Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 +++ +LD + L D F N++S ++ D + +S G+ ++ F N A A++ LN + D+ + + R+ + N+F+KNLD S ++ L + F +GTI S V D G+SK +GFV FE + A A+D LNG +D++ Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRI----MLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQ 205 HSP 4 Score: 75.8702 bits (185), Expect = 1.111e-13 Identity = 32/81 (39.51%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 249 N+++KNLD S+D + L + FS +GN+ S K+ + G S+GFGFV + N E A A+ ++NG +I K +++ RK++R Sbjct: 333 NLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDR 413
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 1.754e-51 Identity = 101/157 (64.33%), Postives = 129/157 (82.17%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER---ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNG 465 GN+FIKNLD SID+KAL++TFSSFG ILSCK+A D G+SKG+GFVQFE +E+AQ AIDKLNGML+NDKQVFVGHF+R+Q+R E+ A+ + F NV+VKNL + TD++LKK FG+YG I+SAVVM+D G S+ FGFVNF + + AA AV+ +NG Sbjct: 132 GNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPS-FTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNG 287 HSP 2 Score: 124.405 bits (311), Expect = 2.724e-28 Identity = 64/167 (38.32%), Postives = 100/167 (59.88%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF-------------NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N+++KNL K I L TF +G+I S + D SG S+ FGFV F + E+A A++K+NG+ + + ++VG +K +RE ++ KF +N+++KNLD+S DE LK++F EYG +TS VM + G S+ FGFV + N ++A A+ +NGK Sbjct: 226 NVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREE-ELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGK 391 HSP 3 Score: 92.4337 bits (228), Expect = 1.147e-18 Identity = 51/160 (31.87%), Postives = 86/160 (53.75%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 ++++ +LD S++ L D F+ + + ++ D + +S G+ +V F N E A A++ LN I D+ + + R+ + NVF+KNLD S ++ L + F +GTI S V D G+SK +GFV FE + A A+D LNG +D++ Sbjct: 46 SLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRI----MLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQ 201 HSP 4 Score: 78.1814 bits (191), Expect = 2.239e-14 Identity = 34/82 (41.46%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 252 N+++KNLD S++ + L + FS +GN+ SCK+ + G S+GFGFV + N E A A+ ++NG +I K ++V RK+ER+ Sbjct: 329 NLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQ 410
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 8.146e-49 Identity = 93/160 (58.13%), Postives = 126/160 (78.75%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENVDDAAKAVDALNGKKF 474 GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+AQNAI +NGML+NDK+VFVGH + K++R++ +K F NV+VKN+D+ TT+E+ + +F ++G ITSA + RD + GKS+ FGFVNF + D+AA AV+ALN K F Sbjct: 143 GNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDF 302 HSP 2 Score: 100.908 bits (250), Expect = 3.226e-21 Identity = 69/218 (31.65%), Postives = 100/218 (45.87%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV------------AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-------------------------------GD----------------------GKSKCFGFVNFENVDDAAKAVDALN 462 N+++KN+D+ + D F FG I S +A D SG+S+GFGFV F + ++A A++ LN ++++VG +K ERE A K + N+++KNL + DE L+++F YGTITSA VMRD GD GKSK FGFV F + D+A+KAV +N Sbjct: 237 NVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKDNKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMN 454 HSP 3 Score: 87.4261 bits (215), Expect = 3.691e-17 Identity = 48/163 (29.45%), Postives = 85/163 (52.15%), Query Frame = 1 Query: 1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 + ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + N + A++ LN LI + + +R+ KT NVF+KNLD + ++ L F +G I S V +D G SK +GFV++E + A A+ +NG +D++ Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKK 212
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 3.095e-48 Identity = 89/158 (56.33%), Postives = 121/158 (76.58%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKK 471 GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++ +K F NV++KN+D+ TDE+ +K+F ++G ITSA + RD +GKS+ FGFVNF D A AVD +N K+ Sbjct: 140 GNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKE 297 HSP 2 Score: 107.842 bits (268), Expect = 2.639e-23 Identity = 69/209 (33.01%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE------------TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD----GD-----------------------------------------GKSKCFGFVNFENVDDAAKAVDALN 462 N++IKN+D+ + + F FG I S ++ D G+S+GFGFV F +SAQ A+D++N I ++++VG +K ERE A K + N++VKNL + DE L+++F +GTITSA VMRD G+ GKSK FGFV F + D+A+KAV +N Sbjct: 234 NVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVTAGETSESEKEKESNKENEKEGEEKTEEKPKESEEEAKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMN 442 HSP 3 Score: 89.3521 bits (220), Expect = 9.712e-18 Identity = 49/163 (30.06%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 + ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N + A++ LN LI K + +R+ KT NVF+KNLD + ++ L F +G I S V +D G SK +GFV++E + A A+ +NG +D++ Sbjct: 51 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKK 209
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 3.095e-48 Identity = 89/158 (56.33%), Postives = 121/158 (76.58%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKK 471 GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++ +K F NV++KN+D+ TDE+ +K+F ++G ITSA + RD +GKS+ FGFVNF D A AVD +N K+ Sbjct: 140 GNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKE 297 HSP 2 Score: 107.071 bits (266), Expect = 4.501e-23 Identity = 69/211 (32.70%), Postives = 101/211 (47.87%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE------------TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD----GD-------------------------------------------GKSKCFGFVNFENVDDAAKAVDALN 462 N++IKN+D+ + + F FG I S ++ D G+S+GFGFV F +SAQ A+D++N I ++++VG +K ERE A K + N++VKNL + DE L+++F +GTITSA VMRD G+ GKSK FGFV F + D+A+KAV +N Sbjct: 234 NVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVTTGETSESEKEKEKESNKENEKEGEEKTEEKPKESEEEPKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMN 444 HSP 3 Score: 89.3521 bits (220), Expect = 9.712e-18 Identity = 49/163 (30.06%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 + ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N + A++ LN LI K + +R+ KT NVF+KNLD + ++ L F +G I S V +D G SK +GFV++E + A A+ +NG +D++ Sbjct: 51 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKK 209
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 189.889 bits (481), Expect = 5.280e-48 Identity = 95/162 (58.64%), Postives = 123/162 (75.93%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483 GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AIDK+NGML+ND++VFVG F ++ERE A +F NV++KN + DE LK++FG+YG S VM D +GKSK FGFV+FE +DA KAVD +NGK + + Sbjct: 99 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGK 259 HSP 2 Score: 136.732 bits (343), Expect = 5.305e-32 Identity = 75/167 (44.91%), Postives = 105/167 (62.87%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N++IKN ++ + L + F +G LS K+ TD +G+SKGFGFV FE E AQ A+D++NG +N K +FVG +K ER+T +K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FGFV F + ++A KAV +NG+ Sbjct: 192 NVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQT-ELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGR 356 HSP 3 Score: 86.2705 bits (212), Expect = 8.222e-17 Identity = 50/161 (31.06%), Postives = 91/161 (56.52%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 ++++ +L + + L++ FS G ILS ++ D + +S G+ +V F+ A+ A+D +N +I + V + +R+ K+ N+F+KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE + A +A+D +NG +DR+ Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRI----MWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRK 167 HSP 4 Score: 72.0182 bits (175), Expect = 1.605e-12 Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 252 N+++KNLD ID + L F FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 295 NLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.176e-47 Identity = 94/163 (57.67%), Postives = 124/163 (76.07%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE +DA KAVD +NGK+ + ++ Sbjct: 99 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260 HSP 2 Score: 145.206 bits (365), Expect = 1.491e-34 Identity = 78/167 (46.71%), Postives = 107/167 (64.07%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N++IKN + +D + L + F FG LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FGFV F + ++A KAV +NG+ Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGR 356 HSP 3 Score: 85.1149 bits (209), Expect = 1.832e-16 Identity = 50/161 (31.06%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+ A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE + A +A++ +NG +DR+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI----MWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRK 167 HSP 4 Score: 74.3294 bits (181), Expect = 3.233e-13 Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 252 N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 295 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.536e-47 Identity = 94/163 (57.67%), Postives = 124/163 (76.07%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE +DA KAVD +NGK+ + ++ Sbjct: 99 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260 HSP 2 Score: 145.206 bits (365), Expect = 1.491e-34 Identity = 78/167 (46.71%), Postives = 107/167 (64.07%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N++IKN + +D + L + F FG LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FGFV F + ++A KAV +NG+ Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGR 356 HSP 3 Score: 85.1149 bits (209), Expect = 1.832e-16 Identity = 50/161 (31.06%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+ A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE + A +A++ +NG +DR+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI----MWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRK 167 HSP 4 Score: 74.3294 bits (181), Expect = 3.233e-13 Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 252 N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 295 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 2.006e-47 Identity = 94/163 (57.67%), Postives = 123/163 (75.46%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA KAVD +NGK+ + ++ Sbjct: 99 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260 HSP 2 Score: 146.747 bits (369), Expect = 5.126e-35 Identity = 79/167 (47.31%), Postives = 107/167 (64.07%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N++IKN + +D + L D F FG LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FGFV F + ++A KAV +NG+ Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGR 356 HSP 3 Score: 83.5741 bits (205), Expect = 5.329e-16 Identity = 50/161 (31.06%), Postives = 89/161 (55.28%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 ++++ +L L++ FS G ILS ++ D + +S G+ +V F+ A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE + A +A++ +NG +DR+ Sbjct: 12 SLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRI----MWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRK 167 HSP 4 Score: 74.3294 bits (181), Expect = 3.233e-13 Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 252 N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 295 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375 The following BLAST results are available for this feature:
BLAST of FE659327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >FE659327 ID=FE659327; Name=FE659327; organism=Citrus sinensis; type=EST; length=489bpback to top |