EY720905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720905 vs. ExPASy Swiss-Prot
Match: MED10_ANOGA (Mediator of RNA polymerase II transcription subunit 10 OS=Anopheles gambiae GN=MED10 PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15 Identity = 40/120 (33.33%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 196 PKQNLNQVINSVQKTLGLLHQLYLTVSSFNAASQLPLLQRLNSLVSELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKSLRKHLLDELEQTFRMKL 555 P +NL N ++ + + Q+ + VS F Q L Q++ SLV+ L + KL + ++ VP+EV + ID G+NP +T+D I+ + KN+ KGK D+++ + +L+ EL +TF +++ Sbjct: 4 PLENLE---NHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQIDVNVPLEVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELSETFPVEI 120
BLAST of EY720905 vs. ExPASy Swiss-Prot
Match: MED10_AEDAE (Mediator of RNA polymerase II transcription subunit 10 OS=Aedes aegypti GN=MED10 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15 Identity = 40/116 (34.48%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 196 PKQNLNQVINSVQKTLGLLHQLYLTVSSFNAASQLPLLQRLNSLVSELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKSLRKHLLDELEQTF 543 P +NL N ++ + + Q+ + VS F Q L Q++ SLV+ L + KL + ++ VP+EV + ID G+NP +T+D I+ + KN+ KGK D+++ + +L+ EL++TF Sbjct: 4 PLENLE---NHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQVDVNVPLEVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELDETF 116
BLAST of EY720905 vs. ExPASy Swiss-Prot
Match: MED10_XENTR (Mediator of RNA polymerase II transcription subunit 10 OS=Xenopus tropicalis GN=med10 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.366e-12 Identity = 39/106 (36.79%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 229 VQKTLGLLHQLYLTVSSFNAASQLPLLQRLNSLVSELDNMVKLSEKCN-IQVPMEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKSLRKHLLDELEQTF 543 ++K + + QL + VS F +SQ L Q+LN LV+ L ++ K ++ + I VP+EV + ID G+NP +T++ + +AKN+ KGK D K + L+ EL + F Sbjct: 12 LEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFLVTGLQDIDKCRQQLHDITVPLEVFDYIDQGRNPQLYTKECLERALAKNEQVKGKIDTLKKFKSLLIQELSKVF 117
BLAST of EY720905 vs. ExPASy Swiss-Prot
Match: MED10_XENLA (Mediator of RNA polymerase II transcription subunit 10 OS=Xenopus laevis GN=med10 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12 Identity = 39/115 (33.91%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 202 QNLNQVINSVQKTLGLLHQLYLTVSSFNAASQLPLLQRLNSLVSELDNMVKLSEKCN-IQVPMEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKSLRKHLLDELEQTF 543 + + + + ++K + + QL + VS F +SQ L Q+LN LV L ++ K ++ + I VP+EV + ID G+NP +T++ + +AKN+ KGK D K + L+ EL + F Sbjct: 3 EKFDNLEDHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFLVRGLQDIDKCRQQLHDITVPLEVFDYIDQGRNPQLYTKECLERALAKNEQVKGKIDTLKKFKSLLIQELSKVF 117
BLAST of EY720905 vs. ExPASy Swiss-Prot
Match: MED10_MOUSE (Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus GN=Med10 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.331e-12 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 229 VQKTLGLLHQLYLTVSSFNAASQLPLLQRLNSLVSELDNMVKLSEKCN-IQVPMEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKSLRKHLLDELEQTF 543 ++K + + QL + VS F +SQ L Q+LN +V+ L ++ K ++ + I VP+EV ID G+NP +T++ + +AKN+ KGK D K + L+ EL + F Sbjct: 12 LEKFVENIRQLGIIVSDFQPSSQAGLSQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVF 117
BLAST of EY720905 vs. ExPASy Swiss-Prot
Match: MED10_PONAB (Mediator of RNA polymerase II transcription subunit 10 OS=Pongo abelii GN=MED10 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.044e-12 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 229 VQKTLGLLHQLYLTVSSFNAASQLPLLQRLNSLVSELDNMVKLSEKCN-IQVPMEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKSLRKHLLDELEQTF 543 ++K + + QL + VS F +SQ L Q+LN +V+ L ++ K ++ + I VP+EV ID G+NP +T++ + +AKN+ KGK D K + L+ EL + F Sbjct: 12 LEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVF 117
BLAST of EY720905 vs. ExPASy Swiss-Prot
Match: MED10_HUMAN (Mediator of RNA polymerase II transcription subunit 10 OS=Homo sapiens GN=MED10 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.044e-12 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 229 VQKTLGLLHQLYLTVSSFNAASQLPLLQRLNSLVSELDNMVKLSEKCN-IQVPMEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKSLRKHLLDELEQTF 543 ++K + + QL + VS F +SQ L Q+LN +V+ L ++ K ++ + I VP+EV ID G+NP +T++ + +AKN+ KGK D K + L+ EL + F Sbjct: 12 LEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVF 117
BLAST of EY720905 vs. ExPASy Swiss-Prot
Match: MED10_BOVIN (Mediator of RNA polymerase II transcription subunit 10 OS=Bos taurus GN=MED10 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.044e-12 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 229 VQKTLGLLHQLYLTVSSFNAASQLPLLQRLNSLVSELDNMVKLSEKCN-IQVPMEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKSLRKHLLDELEQTF 543 ++K + + QL + VS F +SQ L Q+LN +V+ L ++ K ++ + I VP+EV ID G+NP +T++ + +AKN+ KGK D K + L+ EL + F Sbjct: 12 LEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVF 117
BLAST of EY720905 vs. ExPASy Swiss-Prot
Match: MED10_MACFA (Mediator of RNA polymerase II transcription subunit 10 OS=Macaca fascicularis GN=MED10 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.973e-11 Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 229 VQKTLGLLHQLYLTVSSFNAASQLPLLQRLNSLVSELDNMVKLSEKCN-IQVPMEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKSLRKHLLDELEQTF 543 ++K + + QL + VS F +SQ L Q+LN +V+ L ++ K ++ + I VP+EV ID G+NP +T++ + +AKN+ KGK D K + L+ L + F Sbjct: 12 LEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQGLSKVF 117
BLAST of EY720905 vs. ExPASy Swiss-Prot
Match: MED10_DANRE (Mediator of RNA polymerase II transcription subunit 10 OS=Danio rerio GN=med10 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.973e-11 Identity = 36/106 (33.96%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 229 VQKTLGLLHQLYLTVSSFNAASQLPLLQRLNSLVSELDNMVKLSEKCN-IQVPMEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKSLRKHLLDELEQTF 543 ++K + + QL + VS F +SQ L Q+LN +++ L ++ K ++ + I VP+EV ID G+NP +T++ + +AKN+ KGK D + L+ EL + F Sbjct: 12 LEKFVENIRQLGIIVSDFQPSSQTGLNQKLNFMITGLQDIEKCRQQLHDINVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTLTKFKSLLISELGKVF 117 The following BLAST results are available for this feature:
BLAST of EY720905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720905 ID=EY720905; Name=EY720905; organism=Citrus sinensis; type=EST; length=901bpback to top |