EY720144

Overview
NameEY720144
Unique NameEY720144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEFS (Queuosine biosynthesis protein queC OS=Pseudomonas fluorescens (strain SBW25) GN=queC PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.330e-22
Identity = 68/162 (41.98%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  302 DQKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787
            DQKRAVILLSGGLDSATVVAMA+A GYSCYTMSFDYGQ              D+GVVEH+  G             +     +AP++G  VT      T   +LALGW  +L AR IF+G +                      +L T  GV+  GF   AP
Sbjct:    2 DQKRAVILLSGGLDSATVVAMAQAQGYSCYTMSFDYGQRHRAELNAAARVARDMGVVEHKVIGLNLNGIGGSALTDSSIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEVLNARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFRILAP 163          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEPG (Queuosine biosynthesis protein queC OS=Pseudomonas putida (strain GB-1) GN=queC PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.737e-22
Identity = 71/164 (43.29%), Postives = 84/164 (51.22%), Query Frame = 2
Query:  296 MTDQKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787
            MTD KRAVILLSGGLDSATVVAMA+A+GYSCYTMSFDYGQ              DLGVVEH+  G             +     +AP++G  VT      T   +LALGW  +LEAR IF+G +                      +L T  GV+  GF   AP
Sbjct:    1 MTD-KRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDLGVVEHKVIGLNLDGIGGSALTDSNIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAP 163          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC1_PSEF5 (Queuosine biosynthesis protein queC 1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=queC1 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.268e-22
Identity = 70/180 (38.89%), Postives = 85/180 (47.22%), Query Frame = 2
Query:  299 TDQKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAPRGKRCAGEVLTGRRRAG 838
            + +KRAVILLSGGLDSATVVAMARA+GY CYTMSFDYGQ              DLGVVEH+  G             +     +AP +G  VT      T   +LALGW  +L AR IF+G +                      +L T  GV+  GF   AP       E++    R G
Sbjct:   10 SSEKRAVILLSGGLDSATVVAMARAEGYRCYTMSFDYGQRHRAELHAAERVARDLGVVEHKVIGLNLNGIGGSALTDSTIEVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLHARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNLSKAEIIQAGVRLG 189          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEPU (Queuosine biosynthesis protein queC OS=Pseudomonas putida GN=queC PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22
Identity = 68/161 (42.24%), Postives = 81/161 (50.31%), Query Frame = 2
Query:  305 QKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787
            +KRAVILLSGGLDSATVVAMA+A+GYSCYTMSFDYGQ              DLGVVEH+  G             +     +AP +G  VT      T   +LALGW  +LEAR IF+G +                      +L T  GV+  GF   AP
Sbjct:    3 EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDLGVVEHKVIGLNLDGIGGSALTDSSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAP 163          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEPK (Queuosine biosynthesis protein queC OS=Pseudomonas putida (strain KT2440) GN=queC PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22
Identity = 68/161 (42.24%), Postives = 81/161 (50.31%), Query Frame = 2
Query:  305 QKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787
            +KRAVILLSGGLDSATVVAMA+A+GYSCYTMSFDYGQ              DLGVVEH+  G             +     +AP +G  VT      T   +LALGW  +LEAR IF+G +                      +L T  GV+  GF   AP
Sbjct:    3 EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDLGVVEHKVIGLNLDGIGGSALTDSSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAP 163          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEP1 (Queuosine biosynthesis protein queC OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=queC PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22
Identity = 68/161 (42.24%), Postives = 81/161 (50.31%), Query Frame = 2
Query:  305 QKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787
            +KRAVILLSGGLDSATVVAMA+A+GYSCYTMSFDYGQ              DLGVVEH+  G             +     +AP +G  VT      T   +LALGW  +LEAR IF+G +                      +L T  GV+  GF   AP
Sbjct:    3 EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVAHDLGVVEHKVIGLNLDGIGGSALTDSSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAP 163          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEE4 (Queuosine biosynthesis protein queC OS=Pseudomonas entomophila (strain L48) GN=queC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.600e-22
Identity = 70/164 (42.68%), Postives = 82/164 (50.00%), Query Frame = 2
Query:  296 MTDQKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787
            MTD KRAVILLSGGLDSATVVAMA+A+GY+CYTMSFDYGQ              DLGVVEH+  G                   +AP +G  VT      T   +LALGW  +LEAR IF+G +                      +L T  GV+  GF   AP
Sbjct:    1 MTD-KRAVILLSGGLDSATVVAMAKAEGYACYTMSFDYGQRHRAELDAAARVARDLGVVEHKVIGLNLNGIGGSALTDNSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAP 163          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEMY (Queuosine biosynthesis protein queC OS=Pseudomonas mendocina (strain ymp) GN=queC PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.470e-21
Identity = 67/177 (37.85%), Postives = 84/177 (47.46%), Query Frame = 2
Query:  308 KRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAPRGKRCAGEVLTGRRRAG 838
            K+AVILLSGGLDSATVVAMARA+GY+CY+MSFDYGQ               LGVVEH+  G             +     + P +G  VT      T   +LALGW  +L AR IF+G +                      +L T  GV+  GF   AP  +   GE++    R G
Sbjct:    4 KKAVILLSGGLDSATVVAMARAEGYACYSMSFDYGQRHRAELQAAERVARQLGVVEHKVVGLNLNGIGGSALTDSSIAVPETPGEGIPVTYVPARNTVFLSLALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFAIRAPLQQMSKGEIIQAGMRLG 180          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEPW (Queuosine biosynthesis protein queC OS=Pseudomonas putida (strain W619) GN=queC PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.920e-21
Identity = 66/161 (40.99%), Postives = 80/161 (49.69%), Query Frame = 2
Query:  305 QKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787
            +KRAVILLSGGLDSATVVAMA+A+GYSCYTMSFDYGQ              DLGVVEH+  G             +     + P +G  VT      T   +LALGW  +L+AR IF+G +                      +L T  GV+  GF   AP
Sbjct:    3 EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDLGVVEHKVIGLNLDGIGGSALTDSSIDVPETPGEGIPVTYVPARNTVFLSLALGWAEVLQARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAP 163          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEA7 (Queuosine biosynthesis protein queC OS=Pseudomonas aeruginosa (strain PA7) GN=queC PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.275e-21
Identity = 65/162 (40.12%), Postives = 80/162 (49.38%), Query Frame = 2
Query:  302 DQKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787
            +QK+AVILLSGGLDSATVVAMA+ADGY+CYTMSFDYGQ               LG +EH+  G                   +AP++G  VT      T   +LALGW  +LEAR IF+G +                      +L T  GV+  GF   AP
Sbjct:    2 NQKKAVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQLGAIEHKVIGLDLNGMGGSALTDDSIAVPEAPSQGIPVTYVPARNTVFLSLALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAP 163          
The following BLAST results are available for this feature:
BLAST of EY720144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
QUEC_PSEFS1.330e-2241.98Queuosine biosynthesis protein queC OS=Pseudomonas... [more]
QUEC_PSEPG1.737e-2243.29Queuosine biosynthesis protein queC OS=Pseudomonas... [more]
QUEC1_PSEF52.268e-2238.89Queuosine biosynthesis protein queC 1 OS=Pseudomon... [more]
QUEC_PSEPU2.962e-2242.24Queuosine biosynthesis protein queC OS=Pseudomonas... [more]
QUEC_PSEPK2.962e-2242.24Queuosine biosynthesis protein queC OS=Pseudomonas... [more]
QUEC_PSEP12.962e-2242.24Queuosine biosynthesis protein queC OS=Pseudomonas... [more]
QUEC_PSEE46.600e-2242.68Queuosine biosynthesis protein queC OS=Pseudomonas... [more]
QUEC_PSEMY1.470e-2137.85Queuosine biosynthesis protein queC OS=Pseudomonas... [more]
QUEC_PSEPW1.920e-2140.99Queuosine biosynthesis protein queC OS=Pseudomonas... [more]
QUEC_PSEA73.275e-2140.12Queuosine biosynthesis protein queC OS=Pseudomonas... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-F08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720144 ID=EY720144; Name=EY720144; organism=Citrus sinensis; type=EST; length=853bp
CTCCAGACCCCCGGGTCCAAGGAAGCGCACCGCAACCGCTACGAGAACAT
CGAGTTGCTGACGGCCAACGACCAGGTCAAGTTCGTCATCTGTTCCCGTG
AAGACTACGACTGGGCGACCTCCAAGCTGATCCAATATGGCCTGGACCGC
CGTGCCGGCGAAGTGCTGTTTTCCCCCAGCCATCATGACCTGAATGCTCG
CGACCTGGCTGACTGGGTTGTCGCAGACAATCTGCCGGTGCGCCTGCAGC
TGCAGTTGCACAAGTACCTGTGGAACGACGAGCCGGGGCGCTGAGATGAC
TGATCAAAAGCGTGCTGTCATCCTGCTGTCCGGCGGCCTCGACTCCGCCA
CCGTGGTCGCCATGGCCCGTGCAGATGGCTACAGCTGCTACACCATGAGC
TTCGACTACGGCCAGCGTCACCGTGCCGAGCTGGAGGCTGCTGCCCGCGT
CGCCCGAGACCTGGGCGTGGTGGAGCACAGGTGATCGGGCTGAACCTCGA
CGGCATGGGTGGTTCGGCGCTGACCGACAGCTCCATAGACGTGCCGCAAG
GCCCCAGCGAAGGGATCCCGGGTGACTAAGTGGCTGCGCGGTACCACGTC
CTGCTGTACCCTGGCCCTGGGTTGGGGCCGAATTCTCGAGGCGCGCCACA
TTTTCGTCGGCGGTCACCGCCCTGTATTACGCCGGGTACCCGGACTGCCG
CCCCTATTATCTCGAGTCCTGCGAGCGCGGGGCCACCTCCCCACCATGGG
CGGTGTTAAATGGGCGGGTTTTGGCTTCTGTGCGCCGCGTGGGAAACGGT
GCGCGGGCGAGGTCCTGACAGGGCGGCGCAGGGCAGGGGCGCTCTGCCCC
GCG
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