EY720144
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEFS (Queuosine biosynthesis protein queC OS=Pseudomonas fluorescens (strain SBW25) GN=queC PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.330e-22 Identity = 68/162 (41.98%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 302 DQKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787 DQKRAVILLSGGLDSATVVAMA+A GYSCYTMSFDYGQ D+GVVEH+ G + +AP++G VT T +LALGW +L AR IF+G + +L T GV+ GF AP Sbjct: 2 DQKRAVILLSGGLDSATVVAMAQAQGYSCYTMSFDYGQRHRAELNAAARVARDMGVVEHKVIGLNLNGIGGSALTDSSIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEVLNARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFRILAP 163
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEPG (Queuosine biosynthesis protein queC OS=Pseudomonas putida (strain GB-1) GN=queC PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.737e-22 Identity = 71/164 (43.29%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 296 MTDQKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787 MTD KRAVILLSGGLDSATVVAMA+A+GYSCYTMSFDYGQ DLGVVEH+ G + +AP++G VT T +LALGW +LEAR IF+G + +L T GV+ GF AP Sbjct: 1 MTD-KRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDLGVVEHKVIGLNLDGIGGSALTDSNIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAP 163
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC1_PSEF5 (Queuosine biosynthesis protein queC 1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=queC1 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.268e-22 Identity = 70/180 (38.89%), Postives = 85/180 (47.22%), Query Frame = 2 Query: 299 TDQKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAPRGKRCAGEVLTGRRRAG 838 + +KRAVILLSGGLDSATVVAMARA+GY CYTMSFDYGQ DLGVVEH+ G + +AP +G VT T +LALGW +L AR IF+G + +L T GV+ GF AP E++ R G Sbjct: 10 SSEKRAVILLSGGLDSATVVAMARAEGYRCYTMSFDYGQRHRAELHAAERVARDLGVVEHKVIGLNLNGIGGSALTDSTIEVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLHARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNLSKAEIIQAGVRLG 189
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEPU (Queuosine biosynthesis protein queC OS=Pseudomonas putida GN=queC PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22 Identity = 68/161 (42.24%), Postives = 81/161 (50.31%), Query Frame = 2 Query: 305 QKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787 +KRAVILLSGGLDSATVVAMA+A+GYSCYTMSFDYGQ DLGVVEH+ G + +AP +G VT T +LALGW +LEAR IF+G + +L T GV+ GF AP Sbjct: 3 EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDLGVVEHKVIGLNLDGIGGSALTDSSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAP 163
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEPK (Queuosine biosynthesis protein queC OS=Pseudomonas putida (strain KT2440) GN=queC PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22 Identity = 68/161 (42.24%), Postives = 81/161 (50.31%), Query Frame = 2 Query: 305 QKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787 +KRAVILLSGGLDSATVVAMA+A+GYSCYTMSFDYGQ DLGVVEH+ G + +AP +G VT T +LALGW +LEAR IF+G + +L T GV+ GF AP Sbjct: 3 EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDLGVVEHKVIGLNLDGIGGSALTDSSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAP 163
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEP1 (Queuosine biosynthesis protein queC OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=queC PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22 Identity = 68/161 (42.24%), Postives = 81/161 (50.31%), Query Frame = 2 Query: 305 QKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787 +KRAVILLSGGLDSATVVAMA+A+GYSCYTMSFDYGQ DLGVVEH+ G + +AP +G VT T +LALGW +LEAR IF+G + +L T GV+ GF AP Sbjct: 3 EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVAHDLGVVEHKVIGLNLDGIGGSALTDSSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAP 163
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEE4 (Queuosine biosynthesis protein queC OS=Pseudomonas entomophila (strain L48) GN=queC PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.600e-22 Identity = 70/164 (42.68%), Postives = 82/164 (50.00%), Query Frame = 2 Query: 296 MTDQKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787 MTD KRAVILLSGGLDSATVVAMA+A+GY+CYTMSFDYGQ DLGVVEH+ G +AP +G VT T +LALGW +LEAR IF+G + +L T GV+ GF AP Sbjct: 1 MTD-KRAVILLSGGLDSATVVAMAKAEGYACYTMSFDYGQRHRAELDAAARVARDLGVVEHKVIGLNLNGIGGSALTDNSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAP 163
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEMY (Queuosine biosynthesis protein queC OS=Pseudomonas mendocina (strain ymp) GN=queC PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.470e-21 Identity = 67/177 (37.85%), Postives = 84/177 (47.46%), Query Frame = 2 Query: 308 KRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAPRGKRCAGEVLTGRRRAG 838 K+AVILLSGGLDSATVVAMARA+GY+CY+MSFDYGQ LGVVEH+ G + + P +G VT T +LALGW +L AR IF+G + +L T GV+ GF AP + GE++ R G Sbjct: 4 KKAVILLSGGLDSATVVAMARAEGYACYSMSFDYGQRHRAELQAAERVARQLGVVEHKVVGLNLNGIGGSALTDSSIAVPETPGEGIPVTYVPARNTVFLSLALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFAIRAPLQQMSKGEIIQAGMRLG 180
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEPW (Queuosine biosynthesis protein queC OS=Pseudomonas putida (strain W619) GN=queC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.920e-21 Identity = 66/161 (40.99%), Postives = 80/161 (49.69%), Query Frame = 2 Query: 305 QKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787 +KRAVILLSGGLDSATVVAMA+A+GYSCYTMSFDYGQ DLGVVEH+ G + + P +G VT T +LALGW +L+AR IF+G + +L T GV+ GF AP Sbjct: 3 EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDLGVVEHKVIGLNLDGIGGSALTDSSIDVPETPGEGIPVTYVPARNTVFLSLALGWAEVLQARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAP 163
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_PSEA7 (Queuosine biosynthesis protein queC OS=Pseudomonas aeruginosa (strain PA7) GN=queC PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.275e-21 Identity = 65/162 (40.12%), Postives = 80/162 (49.38%), Query Frame = 2 Query: 302 DQKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAP 787 +QK+AVILLSGGLDSATVVAMA+ADGY+CYTMSFDYGQ LG +EH+ G +AP++G VT T +LALGW +LEAR IF+G + +L T GV+ GF AP Sbjct: 2 NQKKAVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQLGAIEHKVIGLDLNGMGGSALTDDSIAVPEAPSQGIPVTYVPARNTVFLSLALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAP 163 The following BLAST results are available for this feature:
BLAST of EY720144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720144 ID=EY720144; Name=EY720144; organism=Citrus sinensis; type=EST; length=853bpback to top |