EY711585
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711585 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 3.195e-94 Identity = 189/284 (66.55%), Postives = 215/284 (75.70%), Query Frame = 1 Query: 58 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE-------VAMLENR*VDQAEVP*GS*HYQEGKMCCLMINDLDAGTGRMGGTTQYTVNNQMFTPHS*PLL--ITQLVSTSLYEHKEENPGSK-S*PGNDFPT 873 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT KD+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE ++ R + A++ ++GKMCCL INDLDAG GRMGGTTQYTVNNQM + T + +Y +KEENP GNDF T Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADI------IKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY-NKEENPRVPIIVTGNDFST 289
BLAST of EY711585 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 3.195e-94 Identity = 189/284 (66.55%), Postives = 215/284 (75.70%), Query Frame = 1 Query: 58 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE-------VAMLENR*VDQAEVP*GS*HYQEGKMCCLMINDLDAGTGRMGGTTQYTVNNQMFTPHS*PLL--ITQLVSTSLYEHKEENPGSK-S*PGNDFPT 873 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT KD+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE ++ R + A++ ++GKMCCL INDLDAG GRMGGTTQYTVNNQM + T + +Y +KEENP GNDF T Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADI------IKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY-NKEENPRVPIIVTGNDFST 289
BLAST of EY711585 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 1.028e-92 Identity = 182/282 (64.54%), Postives = 210/282 (74.47%), Query Frame = 1 Query: 58 PLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE-------VAMLENR*VDQAEVP*GS*HYQEGKMCCLMINDLDAGTGRMGGTTQYTVNNQMFTPHS*PLL--ITQLVSTSLYEHKEENPGSK-S*PGNDFPT 873 P + NGS ++ SVPSS+F G+SLKKV+SR SKV S S +I A VDE+KQT KDRWKGLA+D SDDQQDITRGKG VDSLFQAP G+GTH+A+MSSY+YIS GLR YN DN MDG YIAPAFMDKLVVHITKNFM+LPN+KVPLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGELE ++ R + A++ ++GKMC L INDLDAG GR+GGTTQYTVNNQM + T + +Y +KEENP GNDF T Sbjct: 15 PPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADI------IRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY-NKEENPRVPIIVTGNDFST 289
BLAST of EY711585 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 330.102 bits (845), Expect = 4.025e-90 Identity = 173/244 (70.90%), Postives = 194/244 (79.51%), Query Frame = 1 Query: 61 LSFNGSGAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITA---EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE-------VAMLENR*VDQAEVP*GS*HYQEGKMCCLMINDLDAGTGRMGGTTQYTVNNQM 759 L+ NGSGA S P+S+FFGTSLKK V+SR+P SKV + SFKI A E++E++QT KDRWKGLAYD SDDQQDITRGKG VD LFQAPM GTHYAVMSSY+Y+S GLR LDN DG YIAPAF+DKLVVHITKNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE ++ R + A++ +GKMC L INDLDAG GR+GGTTQYTVNNQM Sbjct: 16 LNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADL------IAKGKMCALFINDLDAGAGRLGGTTQYTVNNQM 251 HSP 2 Score: 23.8682 bits (50), Expect = 4.025e-90 Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 759 VYATLLTIADNPTCV 803 V ATL+ IADNPT V Sbjct: 252 VNATLMNIADNPTNV 266
BLAST of EY711585 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 3.094e-89 Identity = 169/244 (69.26%), Postives = 193/244 (79.10%), Query Frame = 1 Query: 61 LSFNGSGAATSVPSSSFFGTSLKKV-SSRIPPSKVPSASFKITA---EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE-------VAMLENR*VDQAEVP*GS*HYQEGKMCCLMINDLDAGTGRMGGTTQYTVNNQM 759 L+ NGSG S PSS+FFGTSLKKV SSR+P SK+ S SFKI A E++E +QT+ DRW+GLAYD SDDQQDITRGKG VDSLFQAPM GTHYAV+SS+ Y+S GLR YN DN DG YIAPAF+DKLVVHI KNFM+LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELE ++ R + +++ ++GKMC L INDLDAG GR+GGTTQYTVNNQM Sbjct: 16 LNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDL------IKKGKMCVLFINDLDAGAGRLGGTTQYTVNNQM 253
BLAST of EY711585 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 326.25 bits (835), Expect = 5.742e-89 Identity = 173/256 (67.58%), Postives = 196/256 (76.56%), Query Frame = 1 Query: 43 MAAAV---------PLSFNGSGA-ATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE-------VAMLENR*VDQAEVP*GS*HYQEGKMCCLMINDLDAGTGRMGGTTQYTVNNQM 759 MAAAV PLS NGSG+ A S P+S+F G + VS +K + SFK+ A V E+KQT DRW+GLAYD SDDQQDITRGKG VDS+FQAPMGTGTH+AV+SSY+Y+SQGLR YNLDN MDG YIAPAFMDKLVVHITKNF++LPNIKVPLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELE ++ R + A++ ++GKMCCL INDLDAG GRMGGTTQYTVNNQM Sbjct: 1 MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA-VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADL------IKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 249 HSP 2 Score: 23.8682 bits (50), Expect = 5.742e-89 Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 759 VYATLLTIADNPTCV 803 V ATL+ IADNPT V Sbjct: 250 VNATLMNIADNPTNV 264
BLAST of EY711585 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 2.006e-88 Identity = 169/245 (68.98%), Postives = 188/245 (76.73%), Query Frame = 1 Query: 58 PLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE-------VAMLENR*VDQAEVP*GS*HYQEGKMCCLMINDLDAGTGRMGGTTQYTVNNQM 759 PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE VD KQT DRWKGL D SDDQQDITRGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+ LPNIKVPLILGIWGGKGQGKSFQCELVF KMGINPIMMSAGELE ++ R + AE+ ++G MCCL INDLDAG GRMGGTTQYTVNNQM Sbjct: 15 PLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEI------IRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQM 253
BLAST of EY711585 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 6.452e-87 Identity = 165/249 (66.27%), Postives = 188/249 (75.50%), Query Frame = 1 Query: 46 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE-------VAMLENR*VDQAEVP*GS*HYQEGKMCCLMINDLDAGTGRMGGTTQYTVNNQM 759 A PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE D KQT DRWKGL D SDDQQDI RGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YN+DNT+DG YIAP+FMDKLVVHITKNF+ LPNIKVPLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGELE ++ R + AE+ ++G +CCL INDLDAG GRMGGTTQYTVNNQM Sbjct: 11 ANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEI------IRKGNICCLFINDLDAGAGRMGGTTQYTVNNQM 253
BLAST of EY711585 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 1.101e-86 Identity = 174/289 (60.21%), Postives = 205/289 (70.93%), Query Frame = 1 Query: 37 SLMAAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE-------VAMLENR*VDQAEVP*GS*HYQEGKMCCLMINDLDAGTGRMGGTTQYTVNNQMFTPHS*PLL--ITQLVSTSLYEHKEENPGSK-S*PGNDFPT 873 S + A + N S VP+S+F G+ LK VSSR SK+ + +FKI AE DE KQT+KD+W+GLA+D SDDQQDITRGKG D LFQAPMGTGTH AV+SSY+YIS GLR Y+ DN +DG YIAPAFMDKL VHI KNF++LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELE ++ R + A++ ++GKMCCL INDLDAG GR+GGTTQYTVNNQM + T + +Y +KEENP GNDF T Sbjct: 6 STIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADI------IKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY-NKEENPRVPIIVTGNDFST 286
BLAST of EY711585 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 9.317e-86 Identity = 164/247 (66.40%), Postives = 192/247 (77.73%), Query Frame = 1 Query: 46 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITA-EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE-------VAMLENR*VDQAEVP*GS*HYQEGKMCCLMINDLDAGTGRMGGTTQYTVNNQM 759 A+ PLS N S A TSVPS++FFG SLKKV ++ + KV + + ++ A EVDE TK+DRWKGL + SDDQQDI RGKG VDSLFQAP GTGTH+A+M+SY+Y+SQ L+TY LDN +DG YIAPAFMDKLVVHITKNF++LPNIKVPLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGELE ++ R + AE+ ++G MCCL INDLDAG GRMGGTTQYTVNNQM Sbjct: 11 ASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQEVDE---TKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEI------IRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQM 248 The following BLAST results are available for this feature:
BLAST of EY711585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711585 ID=EY711585; Name=EY711585; organism=Citrus sinensis; type=EST; length=903bpback to top |