EY711304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711304 vs. ExPASy Swiss-Prot
Match: SBNO1_MOUSE (Protein strawberry notch homolog 1 OS=Mus musculus GN=Sbno1 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 1.112e-14 Identity = 60/200 (30.00%), Postives = 92/200 (46.00%), Query Frame = 1 Query: 28 NRLFELFISILDLLVQNARLEGNLDSGIVDMKANI--IELQGTPKTVHVDNMSGASTMLFTFTLDRGITWESASTKLDEKQKDGLGSPNDGFYESKREWLGRRHFILAFESTAASGMYKIARPAVGESLREMPLAELKNKYRKLSSIEKARSGWEDDYEVSSKQCMPG------PKCKLANYCTVGRRIQEVNVLRGLIL 603 N LF+ F L +VQNA+ G D GI+D+ + + K + + L+T +++RG++WE A+ E L P+DGFY S + ++ IL E ++ I RP G+ L+ A+LK KY+K+ S + A W D Y S+ C K L C +G R + VL G +L Sbjct: 1116 NALFQYFADTLTAVVQNAKKSGRYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAE-----LTGPDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLIYRPNTGKQLKLEIYADLKKKYKKVVS-DDALVHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVL 1309
BLAST of EY711304 vs. ExPASy Swiss-Prot
Match: SBNO1_HUMAN (Protein strawberry notch homolog 1 OS=Homo sapiens GN=SBNO1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.112e-14 Identity = 59/200 (29.50%), Postives = 92/200 (46.00%), Query Frame = 1 Query: 28 NRLFELFISILDLLVQNARLEGNLDSGIVDMKANI--IELQGTPKTVHVDNMSGASTMLFTFTLDRGITWESASTKLDEKQKDGLGSPNDGFYESKREWLGRRHFILAFESTAASGMYKIARPAVGESLREMPLAELKNKYRKLSSIEKARSGWEDDYEVSSKQCMPG------PKCKLANYCTVGRRIQEVNVLRGLIL 603 N LF+ F L +VQNA+ G D GI+D+ + + K + + L+T +++RG++WE A+ E L P+DGFY S + ++ IL E ++ + RP G+ L+ A+LK KY+K+ S + A W D Y S+ C K L C +G R + VL G +L Sbjct: 1119 NALFQYFADTLTAVVQNAKKNGRYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAE-----LTGPDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVS-DDALMHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVL 1312
BLAST of EY711304 vs. ExPASy Swiss-Prot
Match: SBNO1_RAT (Protein strawberry notch homolog 1 OS=Rattus norvegicus GN=Sbno1 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.477e-14 Identity = 59/200 (29.50%), Postives = 92/200 (46.00%), Query Frame = 1 Query: 28 NRLFELFISILDLLVQNARLEGNLDSGIVDMKANI--IELQGTPKTVHVDNMSGASTMLFTFTLDRGITWESASTKLDEKQKDGLGSPNDGFYESKREWLGRRHFILAFESTAASGMYKIARPAVGESLREMPLAELKNKYRKLSSIEKARSGWEDDYEVSSKQCMPG------PKCKLANYCTVGRRIQEVNVLRGLIL 603 N LF+ F L +VQNA+ G D GI+D+ + + K + + L+T +++RG++W+ A+ E L P+DGFY S + ++ IL E ++ I RP G+ L+ A+LK KY+K+ S + A W D Y S+ C K L C +G R + VL G +L Sbjct: 995 NALFQYFADTLTAVVQNAKKNGRYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWDEATKIWAE-----LTGPDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLIYRPNTGKQLKLEIYADLKKKYKKVVS-DDALVHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVL 1188
BLAST of EY711304 vs. ExPASy Swiss-Prot
Match: SBNO_DROME (Protein strawberry notch OS=Drosophila melanogaster GN=sno PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.967e-13 Identity = 68/234 (29.06%), Postives = 104/234 (44.44%), Query Frame = 1 Query: 13 PPDIPNRLFELFISILDLLVQNARLEGNLDSGIVDMKA---NIIELQGTPKTVHVDNMSGASTMLFTFTLDRGITWESASTKLDEKQKDGLGSPNDGFYESKREWLGRRHFILA--FESTAASG----------------------MYKIARPAVGESLREMPLAELKNKYRKLSSIEKARSGWEDDYEVSSKQCMP---GPKCK---LANYCTVGRRIQEVNVLRGLILPCLG 615 P D+ NRLF+ F + ++Q A+ G D GI+D+ A N+ ++ + V A T + T ++RG+ W+ A K + L + N+GFY S + +R I+ ES +S M +I RP G +R L EL+ KYRK++S E+A W + Y+ S C C+ L N C VG R + +VL G +L G Sbjct: 1551 PVDLQNRLFKYFTDTMTAIIQQAKRGGRFDLGILDLGAAGENVTRVR-LIRFVRKHATGVAPTEMHTVRVERGMIWQEAIDKYAD-----LFNENEGFYLSHQLRNQKRTAIMVVILESRNSSSTSSTTDLDSGSKKKKTHSKKEIMCQIYRPNTGLQVRHESLFELEKKYRKVAS-EEAEPHWTEQYDASVNTCSHAYWNGNCRNVSLGNDCEVGLRQRLYHVLAGSVLSVWG 1777
BLAST of EY711304 vs. ExPASy Swiss-Prot
Match: SBNO2_MOUSE (Protein strawberry notch homolog 2 OS=Mus musculus GN=Sbno2 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11 Identity = 55/205 (26.83%), Postives = 92/205 (44.88%), Query Frame = 1 Query: 28 NRLFELFISILDLLVQNARLEGNLDSGIVDMKANIIELQGTPKTVHV---DNMSGASTMLFTFTLDRGITWESASTKLDEKQKDGLGSPNDGFYESKREWLGRRHFILAFESTAASGMYKIARPAVGESLREMPLAELKNKYRKLSSIEKARSGWEDDYEVSSKQCMP---GPKCKL---ANYCTVGRRIQEVNVLRGLILPCLG 615 N LF+ F D L++ + EG D GI+D+ I E+ + V + G ++DRG+ WE A T+ E L P DGFY S + + +LA ++ + + +P +G + L L K+ ++ ++E+AR WE Y +S + C +C+L C G R++ +L G +L G Sbjct: 975 NALFQYFSDTFDHLIEIDKKEGRYDMGILDLAPGINEIHEESQQVFLAPGHPQDGQVVFYKQISVDRGMKWEEALTRSLE-----LKGPYDGFYLSYKVRGSKMSCLLAEQNRGE--YFTVYKPNIGRQSQLETLDSLCRKFHRV-TVEEAREPWESSYALSLEHCSHTTWNQRCRLTQEGKCCAQGLRLRHHYMLCGALLRVWG 1171
BLAST of EY711304 vs. ExPASy Swiss-Prot
Match: SBNO2_HUMAN (Protein strawberry notch homolog 2 OS=Homo sapiens GN=SBNO2 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 5.709e-11 Identity = 53/204 (25.98%), Postives = 92/204 (45.10%), Query Frame = 1 Query: 28 NRLFELFISILDLLVQNARLEGNLDSGIVDMKANIIELQGTPKTVHV--DNMSGASTMLFTFTLDRGITWESASTKLDEKQKDGLGSPNDGFYESKREWLGRRHFILAFESTAASGMYKIARPAVGESLREMPLAELKNKYRKLSSIEKARSGWEDDYEVSSKQCMPGP---KCKLANY---CTVGRRIQEVNVLRGLILPCLG 615 N LF+ F D L++ + EG D GI+D+ I E+ + V + + + + ++DRG+ WE A K L P DGFY S + + +LA ++ + + +P +G + L L+ K+ ++++ E+A+ WE Y +S C C+LA C G R++ +L G +L G Sbjct: 981 NALFQYFSDTFDHLIEMDKREGKYDMGILDLAPGIEEIYEESQQVFLAPGHPQDGQVVFYKISVDRGLKWEDAFAK-----SLALTGPYDGFYLSYKVRGNKPSCLLAEQNRGQ--FFTVYKPNIGRQSQLEALDSLRRKFHRVTA-EEAKEPWESGYALSLTHCSHSAWNRHCRLAQEGKDCLQGLRLRHHYMLCGALLRVWG 1176 The following BLAST results are available for this feature:
BLAST of EY711304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711304 ID=EY711304; Name=EY711304; organism=Citrus sinensis; type=EST; length=897bpback to top |