EY711187

Overview
NameEY711187
Unique NameEY711187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1621 contig Csv1_Contig1621:158..1039. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.016e-70
Identity = 118/174 (67.82%), Postives = 140/174 (80.46%), Query Frame = 1
Query:  169 MAQIQVQHQ------AQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672
            MAQ+Q+Q Q      A ++     + GA+  QF  TSLYVGDLDFNVTDSQL+D F Q+G V++VRVCRDL TRRSLGYGYVN+ NP DAARA+  LN+ PL  K IR+MYSHRDPS+R+SG GNIFIKNLD+SIDHKALHDTFSSFGNI+SCK+A D SGQSKG+GFVQ+ N+
Sbjct:    1 MAQVQLQGQTPNGSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANE 174          

HSP 2 Score: 45.8246 bits (107), Expect = 1.016e-70
Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            AI+KLNGML NDKQV+VG FLR QER+
Sbjct:  180 AIEKLNGMLLNDKQVYVGPFLRRQERD 206          

HSP 3 Score: 98.5969 bits (244), Expect = 3.310e-22
Identity = 52/141 (36.88%), Postives = 82/141 (58.16%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            ++++ +LD ++    L+D FS  G ++S +V  D S+ +S GYG+V YAN   A +A++ LN   LN+K + +        RD +  K+   N+++KNL +S     L + F  +G I S  +  DG G+SKGFGFV FEN
Sbjct:  125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFEN 264          

HSP 4 Score: 28.1054 bits (61), Expect = 3.310e-22
Identity = 11/29 (37.93%), Postives = 19/29 (65.52%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            + A++ LNG  ++DK+ +VG   +  ERE
Sbjct:  269 ARAVESLNGHKFDDKEWYVGRAQKKSERE 297          

HSP 5 Score: 87.4261 bits (215), Expect = 1.149e-16
Identity = 54/160 (33.75%), Postives = 86/160 (53.75%), Query Frame = 1
Query:  232 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR------------KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663
            ++ N+   T++YV +L  + TD  L + F + G++ S  V +D    +S G+G+VN+ N  DAARA++ LN    ++K   +      S R+  +R            K  + N+++KNLD SI  + L + FS FG + S K+  D +G SKG GFV F
Sbjct:  207 STANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKD-GEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAF 365          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 4.786e-55
Identity = 97/155 (62.58%), Postives = 121/155 (78.06%), Query Frame = 1
Query:  220 VAAGASGNQFLTT----SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672
            VAA A+  + L T    SLYVGDLD +V +S L DLF+QV  V ++RVCRDL T RSLGY YVN+ANP DA+RA++ LN+ P+ ++ IRIM S+RDPS R SG GN+FIKNLD SID+KAL++TFSSFG ILSCK+A D  G+SKG+GFVQFE +
Sbjct:   29 VAAAAAAAEALQTHPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKE 182          

HSP 2 Score: 49.2914 bits (116), Expect = 4.786e-55
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQER 763
            AIDKLNGML NDKQVFVGHF+R Q+R
Sbjct:  188 AIDKLNGMLLNDKQVFVGHFVRRQDR 213          

HSP 3 Score: 87.0409 bits (214), Expect = 2.668e-17
Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTG------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663
            ++++ +LD ++ +  LY+ FS  G +LS +V  D+   RS GYG+V +     A  A+D LN   LN+K + + +  R     +S +G      N+++KNL K I    L  TF  +G+I S  +  D SG S+ FGFV F
Sbjct:  133 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNF 272          

HSP 4 Score: 23.0978 bits (48), Expect = 2.668e-17
Identity = 8/27 (29.63%), Postives = 17/27 (62.96%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            A++K+NG+   +  ++VG   +  +RE
Sbjct:  281 AVEKMNGISLGEDVLYVGRAQKKSDRE 307          

HSP 5 Score: 83.9593 bits (206), Expect = 1.270e-15
Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR------------KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            T++YV +L   +TD +L   F + G + S  V +D S   S  +G+VN+ +P  AA A++ +N   L    + +      S R+  +R            K    N+++KNLD S++ + L + FS +GN+ SCK+  +  G S+GFGFV + N
Sbjct:  225 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSN 377          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.787e-55
Identity = 97/167 (58.08%), Postives = 121/167 (72.46%), Query Frame = 1
Query:  172 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672
            AQ  VQ    +  P+ V      +    +SLY GDLD  VT++ L+DLF  V  V+SVRVCRD   RRSLGY Y+N++NP DA RA++ LN+TPL ++ IRIM S+RDPS R SG GNIFIKNLD SID+KAL +TFSSFG ILSCK+A D +G+SKG+GFVQFE +
Sbjct:   23 AQTSVQVPVSIPLPSPVVVADQTHP--NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKE 186          

HSP 2 Score: 50.8322 bits (120), Expect = 4.787e-55
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQER 763
            AIDKLNGML NDKQVFVGHF+R QER
Sbjct:  192 AIDKLNGMLMNDKQVFVGHFIRRQER 217          

HSP 3 Score: 86.6557 bits (213), Expect = 1.144e-18
Identity = 51/142 (35.92%), Postives = 75/142 (52.82%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKS------IRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            ++++ +LD ++ +  L++ FS  G +LS +V  D+ T RS GYG+V +     A  A+D LN   +N+K       IR     RD +       N+++KNL K I    L  TF  FG I S  +  D SG S+ FGFV FE
Sbjct:  137 NIFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFE 277          

HSP 4 Score: 28.1054 bits (61), Expect = 1.144e-18
Identity = 11/33 (33.33%), Postives = 20/33 (60.61%), Query Frame = 2
Query:  668 TRICSNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            T   ++A++K+NG+   D  ++VG   +  ERE
Sbjct:  279 TEAAASAVEKMNGISLGDDVLYVGRAQKKSERE 311          

HSP 5 Score: 75.8702 bits (185), Expect = 3.459e-13
Identity = 48/154 (31.17%), Postives = 79/154 (51.30%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR------------KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            T++YV +L   + + +L   F + G + S  V RD S   S  +G+VN+     AA A++ +N   L +  + +      S R+  +R            KS   N+++KNLD S+D + L + FS +GN+ S K+  +  G S+GFGFV + N
Sbjct:  229 TNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSN 381          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 5.206e-54
Identity = 92/138 (66.67%), Postives = 113/138 (81.88%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672
            SLYVGDL  +V +S L+D FS  G VLS+RVCRD+ TRRSLGY YVN+  PADA RALD +NF  + NK IRIM+S RDPS+R+SG GN+FIKNLD++ID+KA++DTFS+FGNILSCK+ATD  G SKG+GFV FE +
Sbjct:    3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETE 140          

HSP 2 Score: 37.7354 bits (86), Expect = 5.206e-54
Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            + +IDK+NGML N K+V+VG F+  +ERE
Sbjct:  144 NTSIDKVNGMLLNGKKVYVGKFIPRKERE 172          

HSP 3 Score: 76.6406 bits (187), Expect = 2.028e-13
Identity = 44/142 (30.99%), Postives = 75/142 (52.82%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI-MYSHRDPSIRKSGTG-----NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            ++++ +LD  + +  +YD FS  G +LS +V  D     S GYG+V++     A  ++D +N   LN K + +  +  R    ++ G       N+++KN  +  D + L + F  +G I S K+ +   G+SKGFGFV FE
Sbjct:   91 NVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFE 231          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.777e-54
Identity = 93/148 (62.84%), Postives = 117/148 (79.05%), Query Frame = 1
Query:  223 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            +A  S NQ  + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD  TRRSLGY YVNY N AD  RAL+ LN+T +  K  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D  G SKG+GFV +E
Sbjct:   41 SATPSANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYE 188          

HSP 2 Score: 38.891 bits (89), Expect = 6.777e-54
Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            +NAI  +NGML NDK+VFVGH +  ++R+
Sbjct:  194 NNAIKHVNGMLLNDKKVFVGHHISKKDRQ 222          

HSP 3 Score: 78.5666 bits (192), Expect = 3.144e-14
Identity = 44/141 (31.21%), Postives = 77/141 (54.61%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663
            ++++ +LD  + +  L+D F+  G +LS +V +D     S GYG+V+Y     A  A+  +N   LN+K + + +  S +D   +    K+   N++IKN+D+ +  +     F  FG I S  ++ D  G+S+GFGFV F
Sbjct:  141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNF 280          

HSP 4 Score: 21.1718 bits (43), Expect = 3.144e-14
Identity = 8/27 (29.63%), Postives = 16/27 (59.26%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            A+D++N      ++++VG   +  ERE
Sbjct:  289 AVDEMNDKEIKGQKLYVGRAQKKHERE 315          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABPB_XENLA (Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-B PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.153e-53
Identity = 93/146 (63.70%), Postives = 114/146 (78.08%), Query Frame = 1
Query:  235 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672
            S   +   SLYVGDL  +VT++ LY+ FS  G +LS+RVCRD+ TRRSLGY YVN+  PADA RALD +NF  +  K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+  D +G SKG+GFV FE +
Sbjct:    4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 148          

HSP 2 Score: 40.817 bits (94), Expect = 1.153e-53
Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            AIDK+NGML ND++VFVG F   +ERE
Sbjct:  154 AIDKMNGMLLNDRKVFVGRFKSRKERE 180          

HSP 3 Score: 85.5001 bits (210), Expect = 1.216e-17
Identity = 48/142 (33.80%), Postives = 79/142 (55.63%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            ++++ +LD ++ +  LYD FS  G +LS +V  D     S GYG+V++     A RA+D +N   LN++ + +        R+  +  R     N++IKN  + +D + L + F  +G  LS K+ TD  G+S+GFGFV FE
Sbjct:  100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFE 239          

HSP 4 Score: 25.7942 bits (55), Expect = 1.216e-17
Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            A+D +NG   N K +FVG   +  ER+
Sbjct:  247 AVDDMNGKDLNGKAIFVGRAQKKVERQ 273          

HSP 5 Score: 83.1889 bits (204), Expect = 1.772e-15
Identity = 55/164 (33.54%), Postives = 87/164 (53.05%), Query Frame = 1
Query:  229 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            GA   +F  T++Y+ +   ++ D +L + F Q G  LSV+V  D    +S G+G+V++    DA +A+D +N   LN K+I +  + +                 D   R  G  N+++KNLD  ID + L   F+ FG+I S K+  +G G+SKGFGFV F +
Sbjct:  184 GARAKEF--TNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTD-DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG-GRSKGFGFVCFSS 342          

HSP 6 Score: 20.7866 bits (42), Expect = 1.772e-15
Identity = 8/29 (27.59%), Postives = 17/29 (58.62%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            + A+ ++NG +   K ++V    R +ER+
Sbjct:  347 TKAVTEMNGRIVATKPLYVALAQRKEERQ 375          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.957e-53
Identity = 91/144 (63.19%), Postives = 115/144 (79.86%), Query Frame = 1
Query:  235 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            + NQ  + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD  TRRSLGY YVNY N AD  RAL+ LN+T +  K  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D  G SKG+GFV +E
Sbjct:   44 NNNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYE 187          

HSP 2 Score: 38.891 bits (89), Expect = 1.957e-53
Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            +NAI  +NGML NDK+VFVGH +  ++R+
Sbjct:  193 NNAIKHVNGMLLNDKKVFVGHHISKKDRQ 221          

HSP 3 Score: 77.411 bits (189), Expect = 1.189e-13
Identity = 44/141 (31.21%), Postives = 76/141 (53.90%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663
            ++++ +LD  + +  L+D F+  G +LS +V +D     S GYG+V+Y     A  A+  +N   LN+K + + +  S +D   +    K+   NI+IKN+D  +  +     F  FG I S  ++ D  G+S+GFGFV +
Sbjct:  140 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNY 279          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_ASPNC (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.958e-53
Identity = 91/144 (63.19%), Postives = 115/144 (79.86%), Query Frame = 1
Query:  235 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            + NQ  + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD  TRRSLGY YVNY N AD  RAL+ LN+T +  K  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D  G SKG+GFV +E
Sbjct:   47 AANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYE 190          

HSP 2 Score: 38.891 bits (89), Expect = 1.958e-53
Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            +NAI  +NGML NDK+VFVGH +  ++R+
Sbjct:  196 NNAIKHVNGMLLNDKKVFVGHHISKKDRQ 224          

HSP 3 Score: 81.2629 bits (199), Expect = 8.233e-15
Identity = 47/141 (33.33%), Postives = 76/141 (53.90%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663
            ++++ +LD  + +  L+D F+  G +LS +V +D     S GYG+V+Y     A  A+  +N   LN+K + + +  S +D   +    K+   N++IKNLD  ID       F  FG I S  ++ D  G+S+GFGFV F
Sbjct:  143 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNF 282          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3)

HSP 1 Score: 190.66 bits (483), Expect = 1.960e-53
Identity = 92/146 (63.01%), Postives = 114/146 (78.08%), Query Frame = 1
Query:  235 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672
            S   +   SLYVGDL  +VT++ LY+ FS  G +LS+RVCRD+ TRRSLGY YVN+  PADA RALD +NF  +  + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+  D +G SKG+GFV FE +
Sbjct:    4 SAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 148          

HSP 2 Score: 40.817 bits (94), Expect = 1.960e-53
Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            AIDK+NGML ND++VFVG F   +ERE
Sbjct:  154 AIDKMNGMLLNDRKVFVGRFKSRKERE 180          

HSP 3 Score: 85.1149 bits (209), Expect = 1.216e-17
Identity = 48/142 (33.80%), Postives = 79/142 (55.63%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            ++++ +LD ++ +  LYD FS  G +LS +V  D     S GYG+V++     A RA+D +N   LN++ + +        R+  +  R     N++IKN    ++ + L + F  +G  LS K+ TD +G+SKGFGFV FE
Sbjct:  100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFE 239          

HSP 4 Score: 26.1794 bits (56), Expect = 1.216e-17
Identity = 11/27 (40.74%), Postives = 17/27 (62.96%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            A+D++NG   N K +FVG   +  ER+
Sbjct:  247 AVDEMNGKDMNGKSMFVGRAQKKVERQ 273          

HSP 5 Score: 82.4185 bits (202), Expect = 2.992e-15
Identity = 53/164 (32.32%), Postives = 86/164 (52.44%), Query Frame = 1
Query:  229 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            GA   +F  T++Y+ +   ++ D +L ++F + G  LSV+V  D    +S G+G+V++    DA +A+D +N   +N KS+ +  + +                 D   R  G  N+++KNLD  ID + L   F  FG I S K+  +G G+SKGFGFV F +
Sbjct:  184 GARAKEF--TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG-GRSKGFGFVCFSS 342          

HSP 6 Score: 20.7866 bits (42), Expect = 2.992e-15
Identity = 8/29 (27.59%), Postives = 17/29 (58.62%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            + A+ ++NG +   K ++V    R +ER+
Sbjct:  347 TKAVTEMNGRIVATKPLYVALAQRKEERQ 375          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.555e-53
Identity = 93/147 (63.27%), Postives = 115/147 (78.23%), Query Frame = 1
Query:  232 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672
            A+ + +   SLYVGDL  +VT++ LY+ FS  G VLS+RVCRD+ TRRSLGY YVN+  PADA RALD +NF  +  K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FGNILSCK+  D +G SKG+ FV FE +
Sbjct:    3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQ 148          

HSP 2 Score: 39.2762 bits (90), Expect = 2.555e-53
Identity = 17/27 (62.96%), Postives = 22/27 (81.48%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            AI+K+NGML ND++VFVG F   +ERE
Sbjct:  154 AIEKMNGMLLNDRKVFVGRFKSRKERE 180          

HSP 3 Score: 86.2705 bits (212), Expect = 1.288e-16
Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 1
Query:  229 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            GA   +F  T++Y+ +    V D  L +LFSQ G+ LSV+V RD    +S G+G+V+Y    DA +A++ +N   ++ K I                R     +   I +    N++IKNLD +ID + L   FS FG+I S K+  +  G+SKGFGFV F +
Sbjct:  184 GAKAKEF--TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSS 342          

HSP 4 Score: 21.557 bits (44), Expect = 1.288e-16
Identity = 8/29 (27.59%), Postives = 17/29 (58.62%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            + A+ ++NG +   K ++V    R +ER+
Sbjct:  347 TKAVTEMNGRIVGSKPLYVALAQRKEERK 375          

HSP 5 Score: 82.8037 bits (203), Expect = 4.778e-16
Identity = 46/142 (32.39%), Postives = 80/142 (56.34%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI-MYSHRDPSIRKSGTG-----NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            ++++ +LD ++ +  LYD FS  G +LS +V  D     S GY +V++     A +A++ +N   LN++ + +  +  R     + G       N++IKN  + +D ++L + FS FG  LS K+  D +G+SKGFGFV +E
Sbjct:  100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 239          

HSP 6 Score: 23.0978 bits (48), Expect = 4.778e-16
Identity = 9/29 (31.03%), Postives = 18/29 (62.07%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            + A++++NG   + K +FVG   +  ER+
Sbjct:  245 NKAVEEMNGKEISGKIIFVGRAQKKVERQ 273          
The following BLAST results are available for this feature:
BLAST of EY711187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
PABP2_ARATH1.016e-7067.82Polyadenylate-binding protein 2 OS=Arabidopsis tha... [more]
PABP5_ARATH4.786e-5562.58Polyadenylate-binding protein 5 OS=Arabidopsis tha... [more]
PABP3_ARATH4.787e-5558.08Polyadenylate-binding protein 3 OS=Arabidopsis tha... [more]
PABP_DROME5.206e-5466.67Polyadenylate-binding protein OS=Drosophila melano... [more]
PABP_NEOFI6.777e-5462.84Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABPB_XENLA1.153e-5363.70Polyadenylate-binding protein 1-B OS=Xenopus laevi... [more]
PABP_ASPCL1.957e-5363.19Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_ASPNC1.958e-5363.19Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABPA_XENLA1.960e-5363.01Polyadenylate-binding protein 1-A OS=Xenopus laevi... [more]
PABP4_HUMAN2.555e-5363.27Polyadenylate-binding protein 4 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-H03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711187 ID=EY711187; Name=EY711187; organism=Citrus sinensis; type=EST; length=879bp
CACTGGTACACCTTCGGCACTATTCCGGAATTCCCTATCCGACCCACGCG
TCCGATAGAATCAGATTATCTTATCCTGTTATCTCTCTAGATTTTTATTT
GAGAACTAGCAAGAGAAGAGGGAAATAAAAAAGCCAAAAAAAAAAAGAAG
GATCTAGAAGTGGTAGTGATGGCACAGATTCAGGTGCAACATCAAGCGCA
AATGTCGGGGCCAAACGGAGTGGCGGCGGGTGCGTCAGGGAACCAGTTCC
TAACGACGTCTCTTTATGTTGGCGATCTCGATTTCAACGTGACCGATTCG
CAGCTTTATGATCTGTTCAGCCAGGTCGGTCAAGTTCTGTCGGTTAGGGT
TTGTCGGGACCTGAGCACCAGGCGCTCACTCGGCTATGGTTACGTTAACT
ACGCCAACCCTGCAGATGCGGCAAGGGCACTGGATGTTCTTAACTTCACT
CCACTTAATAATAAGTCCATTAGAATCATGTATTCCCATCGGGATCCTAG
TATTCGGAAAAGCGGTACTGGGAACATATTTATCAAGAATTTGGACAAGT
CTATTGATCACAAAGCATTACACGATACATTTTCTTCATTCGGAAACATT
CTTTCTTGTAAGATAGCTACTGATGGTTCTGGCCAGTCCAAAGGTTTCGG
TTTTGTGCAATTTGAGAACAAGAATCTGCTCAAATGCTATTGATAAGTTA
AATGGCATGCTTTATAATGATAAACAAGTGTTTGTTGGGCACTTTCTTCG
TANGCAGGAAAGAGAACTGTAGCAATAAAACAAATTCATAACGTATTTGT
CAAAAACCTGCTGAGTCACTACGATGAAGATTGAAGAAATTTTTGGTGAG
TTGGAACAATACCATGCANTANTGATGAG
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