EY711187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.016e-70 Identity = 118/174 (67.82%), Postives = 140/174 (80.46%), Query Frame = 1 Query: 169 MAQIQVQHQ------AQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672 MAQ+Q+Q Q A ++ + GA+ QF TSLYVGDLDFNVTDSQL+D F Q+G V++VRVCRDL TRRSLGYGYVN+ NP DAARA+ LN+ PL K IR+MYSHRDPS+R+SG GNIFIKNLD+SIDHKALHDTFSSFGNI+SCK+A D SGQSKG+GFVQ+ N+ Sbjct: 1 MAQVQLQGQTPNGSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANE 174 HSP 2 Score: 45.8246 bits (107), Expect = 1.016e-70 Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 AI+KLNGML NDKQV+VG FLR QER+ Sbjct: 180 AIEKLNGMLLNDKQVYVGPFLRRQERD 206 HSP 3 Score: 98.5969 bits (244), Expect = 3.310e-22 Identity = 52/141 (36.88%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 ++++ +LD ++ L+D FS G ++S +V D S+ +S GYG+V YAN A +A++ LN LN+K + + RD + K+ N+++KNL +S L + F +G I S + DG G+SKGFGFV FEN Sbjct: 125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFEN 264 HSP 4 Score: 28.1054 bits (61), Expect = 3.310e-22 Identity = 11/29 (37.93%), Postives = 19/29 (65.52%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766 + A++ LNG ++DK+ +VG + ERE Sbjct: 269 ARAVESLNGHKFDDKEWYVGRAQKKSERE 297 HSP 5 Score: 87.4261 bits (215), Expect = 1.149e-16 Identity = 54/160 (33.75%), Postives = 86/160 (53.75%), Query Frame = 1 Query: 232 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR------------KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663 ++ N+ T++YV +L + TD L + F + G++ S V +D +S G+G+VN+ N DAARA++ LN ++K + S R+ +R K + N+++KNLD SI + L + FS FG + S K+ D +G SKG GFV F Sbjct: 207 STANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKD-GEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAF 365
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 4.786e-55 Identity = 97/155 (62.58%), Postives = 121/155 (78.06%), Query Frame = 1 Query: 220 VAAGASGNQFLTT----SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672 VAA A+ + L T SLYVGDLD +V +S L DLF+QV V ++RVCRDL T RSLGY YVN+ANP DA+RA++ LN+ P+ ++ IRIM S+RDPS R SG GN+FIKNLD SID+KAL++TFSSFG ILSCK+A D G+SKG+GFVQFE + Sbjct: 29 VAAAAAAAEALQTHPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKE 182 HSP 2 Score: 49.2914 bits (116), Expect = 4.786e-55 Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQER 763 AIDKLNGML NDKQVFVGHF+R Q+R Sbjct: 188 AIDKLNGMLLNDKQVFVGHFVRRQDR 213 HSP 3 Score: 87.0409 bits (214), Expect = 2.668e-17 Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTG------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663 ++++ +LD ++ + LY+ FS G +LS +V D+ RS GYG+V + A A+D LN LN+K + + + R +S +G N+++KNL K I L TF +G+I S + D SG S+ FGFV F Sbjct: 133 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNF 272 HSP 4 Score: 23.0978 bits (48), Expect = 2.668e-17 Identity = 8/27 (29.63%), Postives = 17/27 (62.96%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 A++K+NG+ + ++VG + +RE Sbjct: 281 AVEKMNGISLGEDVLYVGRAQKKSDRE 307 HSP 5 Score: 83.9593 bits (206), Expect = 1.270e-15 Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR------------KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 T++YV +L +TD +L F + G + S V +D S S +G+VN+ +P AA A++ +N L + + S R+ +R K N+++KNLD S++ + L + FS +GN+ SCK+ + G S+GFGFV + N Sbjct: 225 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSN 377
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 4.787e-55 Identity = 97/167 (58.08%), Postives = 121/167 (72.46%), Query Frame = 1 Query: 172 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672 AQ VQ + P+ V + +SLY GDLD VT++ L+DLF V V+SVRVCRD RRSLGY Y+N++NP DA RA++ LN+TPL ++ IRIM S+RDPS R SG GNIFIKNLD SID+KAL +TFSSFG ILSCK+A D +G+SKG+GFVQFE + Sbjct: 23 AQTSVQVPVSIPLPSPVVVADQTHP--NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKE 186 HSP 2 Score: 50.8322 bits (120), Expect = 4.787e-55 Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQER 763 AIDKLNGML NDKQVFVGHF+R QER Sbjct: 192 AIDKLNGMLMNDKQVFVGHFIRRQER 217 HSP 3 Score: 86.6557 bits (213), Expect = 1.144e-18 Identity = 51/142 (35.92%), Postives = 75/142 (52.82%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKS------IRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 ++++ +LD ++ + L++ FS G +LS +V D+ T RS GYG+V + A A+D LN +N+K IR RD + N+++KNL K I L TF FG I S + D SG S+ FGFV FE Sbjct: 137 NIFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFE 277 HSP 4 Score: 28.1054 bits (61), Expect = 1.144e-18 Identity = 11/33 (33.33%), Postives = 20/33 (60.61%), Query Frame = 2 Query: 668 TRICSNAIDKLNGMLYNDKQVFVGHFLRXQERE 766 T ++A++K+NG+ D ++VG + ERE Sbjct: 279 TEAAASAVEKMNGISLGDDVLYVGRAQKKSERE 311 HSP 5 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 48/154 (31.17%), Postives = 79/154 (51.30%), Query Frame = 1 Query: 256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR------------KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 T++YV +L + + +L F + G + S V RD S S +G+VN+ AA A++ +N L + + + S R+ +R KS N+++KNLD S+D + L + FS +GN+ S K+ + G S+GFGFV + N Sbjct: 229 TNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSN 381
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3) HSP 1 Score: 195.667 bits (496), Expect = 5.206e-54 Identity = 92/138 (66.67%), Postives = 113/138 (81.88%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672 SLYVGDL +V +S L+D FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + NK IRIM+S RDPS+R+SG GN+FIKNLD++ID+KA++DTFS+FGNILSCK+ATD G SKG+GFV FE + Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETE 140 HSP 2 Score: 37.7354 bits (86), Expect = 5.206e-54 Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766 + +IDK+NGML N K+V+VG F+ +ERE Sbjct: 144 NTSIDKVNGMLLNGKKVYVGKFIPRKERE 172 HSP 3 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 44/142 (30.99%), Postives = 75/142 (52.82%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI-MYSHRDPSIRKSGTG-----NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 ++++ +LD + + +YD FS G +LS +V D S GYG+V++ A ++D +N LN K + + + R ++ G N+++KN + D + L + F +G I S K+ + G+SKGFGFV FE Sbjct: 91 NVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFE 231
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.777e-54 Identity = 93/148 (62.84%), Postives = 117/148 (79.05%), Query Frame = 1 Query: 223 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 +A S NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E Sbjct: 41 SATPSANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYE 188 HSP 2 Score: 38.891 bits (89), Expect = 6.777e-54 Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766 +NAI +NGML NDK+VFVGH + ++R+ Sbjct: 194 NNAIKHVNGMLLNDKKVFVGHHISKKDRQ 222 HSP 3 Score: 78.5666 bits (192), Expect = 3.144e-14 Identity = 44/141 (31.21%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+ +N LN+K + + + S +D + K+ N++IKN+D+ + + F FG I S ++ D G+S+GFGFV F Sbjct: 141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNF 280 HSP 4 Score: 21.1718 bits (43), Expect = 3.144e-14 Identity = 8/27 (29.63%), Postives = 16/27 (59.26%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 A+D++N ++++VG + ERE Sbjct: 289 AVDEMNDKEIKGQKLYVGRAQKKHERE 315
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABPB_XENLA (Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-B PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 1.153e-53 Identity = 93/146 (63.70%), Postives = 114/146 (78.08%), Query Frame = 1 Query: 235 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672 S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE + Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 148 HSP 2 Score: 40.817 bits (94), Expect = 1.153e-53 Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 AIDK+NGML ND++VFVG F +ERE Sbjct: 154 AIDKMNGMLLNDRKVFVGRFKSRKERE 180 HSP 3 Score: 85.5001 bits (210), Expect = 1.216e-17 Identity = 48/142 (33.80%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 ++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA+D +N LN++ + + R+ + R N++IKN + +D + L + F +G LS K+ TD G+S+GFGFV FE Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFE 239 HSP 4 Score: 25.7942 bits (55), Expect = 1.216e-17 Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 A+D +NG N K +FVG + ER+ Sbjct: 247 AVDDMNGKDLNGKAIFVGRAQKKVERQ 273 HSP 5 Score: 83.1889 bits (204), Expect = 1.772e-15 Identity = 55/164 (33.54%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 229 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 GA +F T++Y+ + ++ D +L + F Q G LSV+V D +S G+G+V++ DA +A+D +N LN K+I + + + D R G N+++KNLD ID + L F+ FG+I S K+ +G G+SKGFGFV F + Sbjct: 184 GARAKEF--TNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTD-DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG-GRSKGFGFVCFSS 342 HSP 6 Score: 20.7866 bits (42), Expect = 1.772e-15 Identity = 8/29 (27.59%), Postives = 17/29 (58.62%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766 + A+ ++NG + K ++V R +ER+ Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.957e-53 Identity = 91/144 (63.19%), Postives = 115/144 (79.86%), Query Frame = 1 Query: 235 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 + NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E Sbjct: 44 NNNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYE 187 HSP 2 Score: 38.891 bits (89), Expect = 1.957e-53 Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766 +NAI +NGML NDK+VFVGH + ++R+ Sbjct: 193 NNAIKHVNGMLLNDKKVFVGHHISKKDRQ 221 HSP 3 Score: 77.411 bits (189), Expect = 1.189e-13 Identity = 44/141 (31.21%), Postives = 76/141 (53.90%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+ +N LN+K + + + S +D + K+ NI+IKN+D + + F FG I S ++ D G+S+GFGFV + Sbjct: 140 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNY 279
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_ASPNC (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.958e-53 Identity = 91/144 (63.19%), Postives = 115/144 (79.86%), Query Frame = 1 Query: 235 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 + NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E Sbjct: 47 AANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYE 190 HSP 2 Score: 38.891 bits (89), Expect = 1.958e-53 Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766 +NAI +NGML NDK+VFVGH + ++R+ Sbjct: 196 NNAIKHVNGMLLNDKKVFVGHHISKKDRQ 224 HSP 3 Score: 81.2629 bits (199), Expect = 8.233e-15 Identity = 47/141 (33.33%), Postives = 76/141 (53.90%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+ +N LN+K + + + S +D + K+ N++IKNLD ID F FG I S ++ D G+S+GFGFV F Sbjct: 143 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNF 282
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 190.66 bits (483), Expect = 1.960e-53 Identity = 92/146 (63.01%), Postives = 114/146 (78.08%), Query Frame = 1 Query: 235 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672 S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE + Sbjct: 4 SAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 148 HSP 2 Score: 40.817 bits (94), Expect = 1.960e-53 Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 AIDK+NGML ND++VFVG F +ERE Sbjct: 154 AIDKMNGMLLNDRKVFVGRFKSRKERE 180 HSP 3 Score: 85.1149 bits (209), Expect = 1.216e-17 Identity = 48/142 (33.80%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 ++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA+D +N LN++ + + R+ + R N++IKN ++ + L + F +G LS K+ TD +G+SKGFGFV FE Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFE 239 HSP 4 Score: 26.1794 bits (56), Expect = 1.216e-17 Identity = 11/27 (40.74%), Postives = 17/27 (62.96%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 A+D++NG N K +FVG + ER+ Sbjct: 247 AVDEMNGKDMNGKSMFVGRAQKKVERQ 273 HSP 5 Score: 82.4185 bits (202), Expect = 2.992e-15 Identity = 53/164 (32.32%), Postives = 86/164 (52.44%), Query Frame = 1 Query: 229 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 GA +F T++Y+ + ++ D +L ++F + G LSV+V D +S G+G+V++ DA +A+D +N +N KS+ + + + D R G N+++KNLD ID + L F FG I S K+ +G G+SKGFGFV F + Sbjct: 184 GARAKEF--TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG-GRSKGFGFVCFSS 342 HSP 6 Score: 20.7866 bits (42), Expect = 2.992e-15 Identity = 8/29 (27.59%), Postives = 17/29 (58.62%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766 + A+ ++NG + K ++V R +ER+ Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.555e-53 Identity = 93/147 (63.27%), Postives = 115/147 (78.23%), Query Frame = 1 Query: 232 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672 A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+ FV FE + Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQ 148 HSP 2 Score: 39.2762 bits (90), Expect = 2.555e-53 Identity = 17/27 (62.96%), Postives = 22/27 (81.48%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 AI+K+NGML ND++VFVG F +ERE Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKERE 180 HSP 3 Score: 86.2705 bits (212), Expect = 1.288e-16 Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 229 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 GA +F T++Y+ + V D L +LFSQ G+ LSV+V RD +S G+G+V+Y DA +A++ +N ++ K I R + I + N++IKNLD +ID + L FS FG+I S K+ + G+SKGFGFV F + Sbjct: 184 GAKAKEF--TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSS 342 HSP 4 Score: 21.557 bits (44), Expect = 1.288e-16 Identity = 8/29 (27.59%), Postives = 17/29 (58.62%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766 + A+ ++NG + K ++V R +ER+ Sbjct: 347 TKAVTEMNGRIVGSKPLYVALAQRKEERK 375 HSP 5 Score: 82.8037 bits (203), Expect = 4.778e-16 Identity = 46/142 (32.39%), Postives = 80/142 (56.34%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI-MYSHRDPSIRKSGTG-----NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 ++++ +LD ++ + LYD FS G +LS +V D S GY +V++ A +A++ +N LN++ + + + R + G N++IKN + +D ++L + FS FG LS K+ D +G+SKGFGFV +E Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 239 HSP 6 Score: 23.0978 bits (48), Expect = 4.778e-16 Identity = 9/29 (31.03%), Postives = 18/29 (62.07%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766 + A++++NG + K +FVG + ER+ Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKKVERQ 273 The following BLAST results are available for this feature:
BLAST of EY711187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711187 ID=EY711187; Name=EY711187; organism=Citrus sinensis; type=EST; length=879bpback to top |