EY711168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711168 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.342e-15 Identity = 64/188 (34.04%), Postives = 90/188 (47.87%), Query Frame = 2 Query: 371 DCTKYESVLVKALNDEAFKALGRA-NLTGLTQGFRMAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------FV---------LDGALVLIYDTKISKLHVIRQASLPCMMQXQSLXXVAEECEK*SLXDIATDFTCTTEKVC 826 D T +VL KA+ E K++ N L +G MA DAVV NL AR I+T EEIAQVGT +ANG+ EIGELIAK EK + +ITI F+ L+ L+LI+D K++ +H + + + + + L VAE+ E +L + + KVC Sbjct: 120 DGTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFITNSKAQKCELEDPLILIHDKKVTNMHAVVKVLEMALKKQRPLLIVAEDVESEALGTLIINKLRAGIKVC 307
BLAST of EY711168 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.342e-15 Identity = 64/188 (34.04%), Postives = 90/188 (47.87%), Query Frame = 2 Query: 371 DCTKYESVLVKALNDEAFKALGRA-NLTGLTQGFRMAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------FV---------LDGALVLIYDTKISKLHVIRQASLPCMMQXQSLXXVAEECEK*SLXDIATDFTCTTEKVC 826 D T +VL KA+ E K++ N L +G MA DAVV NL AR I+T EEIAQVGT +ANG+ EIGELIAK EK + +ITI F+ L+ L+LI+D K++ +H + + + + + L VAE+ E +L + + KVC Sbjct: 120 DGTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFITNSKTQKCELEDPLILIHDKKVTNMHAVVKVLEMALKKQKPLLIVAEDVESEALGTLIINKLRAGIKVC 307
BLAST of EY711168 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.099e-15 Identity = 62/188 (32.98%), Postives = 91/188 (48.40%), Query Frame = 2 Query: 371 DCTKYESVLVKALNDEAFKALGRA-NLTGLTQGFRMAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------FV---------LDGALVLIYDTKISKLHVIRQASLPCMMQXQSLXXVAEECEK*SLXDIATDFTCTTEKVC 826 D T ++L KA+ E K++ N L +G MA D+VV NL +AR I+T EEIAQVGT +ANG+ EIGELIAK EK + +ITI F+ LD L++IY+ KIS ++ + + + + + L V+E+ E +L + + KVC Sbjct: 118 DGTTCATILTKAIFTEGCKSVASGMNAMDLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTMDNELEVVEGMKLDRGYISPYFITNQKNQKCELDDPLIIIYEKKISSINAVVKVLELALKKQRPLLIVSEDVESEALATLILNKLRAGIKVC 305
BLAST of EY711168 vs. ExPASy Swiss-Prot
Match: CH60A_ARATH (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.484e-14 Identity = 64/188 (34.04%), Postives = 91/188 (48.40%), Query Frame = 2 Query: 371 DCTKYESVLVKALNDEAFKALGRA-NLTGLTQGFRMAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------FV---------LDGALVLIYDTKISKLHVIRQASLPCMMQXQSLXXVAEECEK*SLXDIATDFTCTTEKVC 826 D T +VL +A+ E K++ N L +G MA DAVV NL +AR I+T EEIAQVGT +ANG+ EIGELIAK EK + +ITI F+ LD L+LI++ KIS ++ I + + + + L V+E+ E +L + + KVC Sbjct: 117 DGTTCATVLTRAIFAEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKSKARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYTSPYFITNQKTQKCELDDPLILIHEKKISSINSIVKVLELALKRQRPLLIVSEDVESDALATLILNKLRAGIKVC 304
BLAST of EY711168 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.317e-14 Identity = 61/188 (32.45%), Postives = 91/188 (48.40%), Query Frame = 2 Query: 371 DCTKYESVLVKALNDEAFKALGRA-NLTGLTQGFRMAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------FV---------LDGALVLIYDTKISKLHVIRQASLPCMMQXQSLXXVAEECEK*SLXDIATDFTCTTEKVC 826 D T ++L +A+ E K++ N L +G MA D+VV NL +AR I+T EEIAQVGT +ANG+ EIGELIAK EK + +ITI F+ LD L+LI++ KIS ++ + + + + + L V+E+ E +L + + KVC Sbjct: 118 DGTTCATILTRAIFTEGCKSVAAGMNAMDLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTLFNELEVVEGMKLDRGYISPYFITNQKNQKCELDDPLILIHEKKISSINSVVKVLELALKRQRPLLIVSEDVESDALATLILNKLRAGIKVC 305
BLAST of EY711168 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.317e-14 Identity = 61/188 (32.45%), Postives = 90/188 (47.87%), Query Frame = 2 Query: 371 DCTKYESVLVKALNDEAFKALGRA-NLTGLTQGFRMAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------FV---------LDGALVLIYDTKISKLHVIRQASLPCMMQXQSLXXVAEECEK*SLXDIATDFTCTTEKVC 826 D T +VL +A+ E K++ N L +G ++A D VV NL +AR I+T EEIAQVGT +ANGD EIGELIAK E + +ITI F+ L+ L+LI++ KIS ++ + + + + + L VAE+ E +L + + KVC Sbjct: 118 DGTTCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGTISANGDREIGELIAKAMETVGKEGVITIQDGKTLFNELEVVEGMKIDRGYISPYFITNPKTQKCELEDPLILIHEKKISNINAMVKVLELALKKQRPLLIVAEDVESDALATLILNKLRANIKVC 305 The following BLAST results are available for this feature:
BLAST of EY711168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711168 ID=EY711168; Name=EY711168; organism=Citrus sinensis; type=EST; length=910bpback to top |