EY744455
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744455 vs. ExPASy Swiss-Prot
Match: YSH1_USTMA (Endoribonuclease YSH1 OS=Ustilago maydis GN=YSH1 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.681e-26 Identity = 62/176 (35.23%), Postives = 101/176 (57.39%), Query Frame = 2 Query: 26 IILVHGESHEMGRLKTKLMTELA--DCDTKIITPKNCQSDKMYFNSDKMAKTIGRLAEKTP*FGETVTGILVKKGFTYQIMAPDDLRIFSQLSTANITQRITVPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHNRVTLKHDSENHISMRWTSDPISDMVSYSVVPLVLNI 547 I+LVHGE + M +L+ L D KI TP+NC+ + F + + AK IG +A K P G+ V G+L+ K F Y I+ P DL F+ LST+ I QR V + ++ ++++ L+ +Y ++ D E G+ TLR+ V ++ + + + + W S +DMV+ S+V L+L I Sbjct: 431 IVLVHGEQNNMSKLRAALQARFTARGSDVKIHTPRNCEPLVLQFRAQRTAKAIGTIAAKPPAQGDIVDGLLISKDFAYTILDPKDLTDFTGLSTSTIVQRQRVALAVSWEMVRWHLQGMYGRLQEGVDAEEGLRTLRIMGAVDVRQSARHELLVEWVSSIANDMVADSIVALLLGI 606
BLAST of EY744455 vs. ExPASy Swiss-Prot
Match: CPSF3_DICDI (Cleavage and polyadenylation specificity factor subunit 3 OS=Dictyostelium discoideum GN=cpsf3 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.169e-25 Identity = 57/178 (32.02%), Postives = 105/178 (58.99%), Query Frame = 2 Query: 26 IILVHGESHEMGRLKTKLMTELADCDTKIITPKNCQSDKMYFNSDKMAKTIGRLAEKTP*FGETVTGILVKKGFTYQIMAPDDLRIFSQLSTANITQRITVPYSGAFGVIKYRLEQIYESVESSTDEESG----VPTLRVHNRVTLKHDSENHISMRWTSDPISDMVSYSVVPLVLNI 547 ++LVHG+++EM RL+ L+ + + ++TPKN S + F +K+AKT+G + P + + GILV K FT+ I++ D+ ++ L T I Q++T+P++ + ++ LEQIYE + ST+ G PT+ ++N + L ++ I + W S+ ++DM+ S++ L+ I Sbjct: 441 VVLVHGDANEMSRLRQSLVAKFKTIN--VLTPKNAMSVALEFRPEKVAKTLGSIITNPPKQNDIIQGILVTKDFTHHILSASDIHNYTNLKTNIIKQKLTLPFAQTYHILISTLEQIYEQIIESTESTGGGGNEKPTITIYNEIKLIYNIGVSIILEWNSNTVNDMICDSIIALISQI 616
BLAST of EY744455 vs. ExPASy Swiss-Prot
Match: CPSF3_BOVIN (Cleavage and polyadenylation specificity factor subunit 3 OS=Bos taurus GN=CPSF3 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.139e-25 Identity = 62/184 (33.70%), Postives = 110/184 (59.78%), Query Frame = 2 Query: 26 IILVHGESHEMGRLKTKLMTELADCDT---KIITPKNCQSDKMYFNSDKMAKTIGRLAEKTP*FGETVTGILVKKGFTYQIMAPDDLRIFSQLSTANITQRITVPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHNRVTLKHDSENHISMRWTSDPISDMVSYSVVPLVLNIIRDVPKV 568 +ILVHGE +EM RLK L+ E D D ++ P+N ++ + F +K+AK +G LA+K P G+ V+GILVK+ F Y I++P DL ++ L+ + + Q +PY+G F ++ Y+L+++ VE +E P L+V +T+ + + + W ++P +DM + +V ++L ++ PK+ Sbjct: 414 VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEELEIQEK--PALKVFKNITVIQE-PGMVVLEWLANPSNDMYADTVTTVILE-VQSNPKI 593
BLAST of EY744455 vs. ExPASy Swiss-Prot
Match: CPSF3_HUMAN (Cleavage and polyadenylation specificity factor subunit 3 OS=Homo sapiens GN=CPSF3 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.406e-25 Identity = 62/184 (33.70%), Postives = 110/184 (59.78%), Query Frame = 2 Query: 26 IILVHGESHEMGRLKTKLMTELADCDT---KIITPKNCQSDKMYFNSDKMAKTIGRLAEKTP*FGETVTGILVKKGFTYQIMAPDDLRIFSQLSTANITQRITVPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHNRVTLKHDSENHISMRWTSDPISDMVSYSVVPLVLNIIRDVPKV 568 +ILVHGE +EM RLK L+ E D D ++ P+N ++ + F +K+AK +G LA+K P G+ V+GILVK+ F Y I++P DL ++ L+ + + Q +PY+G F ++ Y+L+++ VE +E P L+V +T+ + + + W ++P +DM + +V ++L ++ PK+ Sbjct: 414 VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLCYQLQKLTGDVEELEIQEK--PALKVFKNITVIQE-PGMVVLEWLANPSNDMYADTVTTVILE-VQSNPKI 593
BLAST of EY744455 vs. ExPASy Swiss-Prot
Match: CPSF3_MOUSE (Cleavage and polyadenylation specificity factor subunit 3 OS=Mus musculus GN=Cpsf3 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.204e-24 Identity = 62/184 (33.70%), Postives = 109/184 (59.24%), Query Frame = 2 Query: 26 IILVHGESHEMGRLKTKLMTELADCDT---KIITPKNCQSDKMYFNSDKMAKTIGRLAEKTP*FGETVTGILVKKGFTYQIMAPDDLRIFSQLSTANITQRITVPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHNRVTLKHDSENHISMRWTSDPISDMVSYSVVPLVLNIIRDVPKV 568 +ILVHGE +EM RLK L+ E D D ++ P+N ++ + F +K+AK +G LA+K P G+ V+GILVK+ F Y I++P DL ++ L+ + + Q +PY+G F ++ Y+L+++ VE +E P L+V +T+ + + W ++P +DM + +V ++L ++ PK+ Sbjct: 414 VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFYLLYYQLQKLTGDVEELDIQEK--PALKVFKSITVVQE-PGMVGSEWLANPSNDMYADTVTTVILE-VQSNPKI 593
BLAST of EY744455 vs. ExPASy Swiss-Prot
Match: YSH1_CRYNE (Endoribonuclease YSH1 OS=Cryptococcus neoformans GN=YSH1 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.683e-24 Identity = 65/176 (36.93%), Postives = 99/176 (56.25%), Query Frame = 2 Query: 26 IILVHGESHEMGRLKTKLMTELA--DCDTKIITPKNCQSDKMYFNSDKMAKTIGRLAEKTP*FGETVTGILVKKGFTYQIMAPDDLRIFSQLSTANITQRITVPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHNRVTLKHDSENHISMRWTSDPISDMVSYSVVPLVLNI 547 ++LVHGE+ +MGRL+ L A + I TPKNC+ + F ++M K IG LA P G +V G+LV K F+Y +++P DL F+ LST+ I Q+ V S + V+++ LE +Y VE +EE G + N V + S + +RW S +DM++ S + L+L I Sbjct: 439 VVLVHGEASQMGRLRAALRDTYAAKGQEINIHTPKNCEPLTLTFRQERMVKAIGSLAATRPEHGTSVKGLLVSKDFSYTLLSPADLHDFTGLSTSTIIQKQGVAISVDWAVVRWYLEGMYGEVEEGVEEE-GKAAFIIMNGVQVVQISPTAVELRWKSSSSNDMIADSALALLLGI 613
BLAST of EY744455 vs. ExPASy Swiss-Prot
Match: YSH1_SCHPO (Endoribonuclease ysh1 OS=Schizosaccharomyces pombe GN=ysh1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.332e-23 Identity = 57/180 (31.67%), Postives = 109/180 (60.56%), Query Frame = 2 Query: 14 HAS*IILVHGESHEMGRLKTKLMTELAD--CDTKIITPKNCQSDKMYFNSDKMAKTIGRLAEKTP*FGETVTGILVKKGFTYQIMAPDDLRIFSQLSTANITQRITVPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHNRVTLKHDSENHISMRWTSDPISDMVSYSVVPLVLNI 547 +A IILVHGE MGRLK+ L ++ + D K+ TP+NC + F +++ + +G++A P G+ ++GIL++K Y++M+ +DLR FS L+T +TQ+ +P+ + + + L+Q++ V+ S ++G P V + +TL E+ +++ W + ++D ++ SV+ ++L I Sbjct: 435 NADHIILVHGEQTNMGRLKSALASKFHNRKVDVKVYTPRNCVPLYLPFKGERLVRALGKVAVHKPKEGDIMSGILIQKDANYKLMSAEDLRDFSDLTTTVLTQKQVIPFFSSMELANFHLKQMFGYVKQS-KTKAGQPQYTVMDAITLTLIQEHKLALEWVGNIMNDTIADSVITILLGI 613
BLAST of EY744455 vs. ExPASy Swiss-Prot
Match: YSH1_ASPFU (Endoribonuclease ysh1 OS=Aspergillus fumigatus GN=ysh1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.433e-19 Identity = 64/182 (35.16%), Postives = 99/182 (54.40%), Query Frame = 2 Query: 26 IILVHGESHEMGRLKTKLMTELAD--CDTKIITPKNCQSDKMYFNSDKMAKTIGRLAEKTP*F----GETVTGILVKKGFTYQIMAPDDLRIFSQLSTANIT--QRITVPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHNRVTLKHDSENHISMRWTSD--PISDMVSYSVVPLVL 541 +ILVHGE H+M RLK+KL++ AD K+ TP NC ++ F DK+AK +G+LA+ P G ++G+LV+ GF +MAPDDLR ++ L+T IT Q IT+ S + +I++ LE + ++E E +V T + E I + P+ + +Y V+ VL Sbjct: 465 VILVHGEKHQMMRLKSKLLSLNADKAVKVKVYTPANCDEVRIPFRKDKIAKVVGKLAQVAPPSDQDDGRLMSGVLVQNGFDLSLMAPDDLREYAGLTTTTITCKQHITLS-SASMDLIRWALEGTFGAIEELGSNERS----KVKEESTKAVNGEQEIKEEPADEEIPMEETQTYLVMGCVL 641
BLAST of EY744455 vs. ExPASy Swiss-Prot
Match: YSH1_EMENI (Endoribonuclease ysh1 OS=Emericella nidulans GN=ysh1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.561e-19 Identity = 57/140 (40.71%), Postives = 87/140 (62.14%), Query Frame = 2 Query: 26 IILVHGESHEMGRLKTKLMTELAD--CDTKIITPKNCQSDKMYFNSDKMAKTIGRLAEKT------P*FGETVTGILVKKGFTYQIMAPDDLRIFSQLSTANIT--QRITVPYSGAFGVIKYRLEQIYESVES-STDEES 412 +ILVHGE H+M RLK+KL++ A+ K+ TP NC+ ++ F DK+AK +G+LA+ T G + G+LV+ GF +MAPDDLR ++ L+T IT Q IT+ S + +IK+ LE + ++E TDE++ Sbjct: 464 VILVHGEKHQMMRLKSKLLSLNAEKTVKVKVYTPANCEEVRIPFRKDKIAKVVGKLAQTTLPTDNEDGDGPLMAGVLVQNGFDLSLMAPDDLREYAGLATTTITCKQHITLS-SASMDLIKWALEGTFGAIEEIGTDEDA 602
BLAST of EY744455 vs. ExPASy Swiss-Prot
Match: YSH1_YARLI (Endoribonuclease YSH1 OS=Yarrowia lipolytica GN=YSH1 PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.873e-18 Identity = 49/132 (37.12%), Postives = 78/132 (59.09%), Query Frame = 2 Query: 26 IILVHGESHEMGRLKTKLMTELADC-----DTKIITPKNCQSDKMYFNSDKMAKTIGRLAEKTP*FGETVTGILVKKGFTYQIMAPDDLRIFSQLSTANITQRITVPYSGAFGVIKYRLEQIYESVESSTDE 406 IILVHGE + M RLK L+ + + I P+NC+ ++ F K+AKT+G++AE+ P G+ ++G++V+K F Y +M DLR LST+++ +R TV + ++KY LEQ++ VE E Sbjct: 444 IILVHGELNNMQRLKAALLAKYRGLKNSPREKTIYNPRNCEEVELAFKGVKVAKTVGKMAEEKPHVGQIISGVVVQKDFNYGLMGVADLREHVGLSTSSVLERQTVTVNAGVDLVKYHLEQMFGYVEMRETE 575 The following BLAST results are available for this feature:
BLAST of EY744455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744455 ID=EY744455; Name=EY744455; organism=Citrus sinensis; type=EST; length=909bpback to top |